| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is mlrA [H]
Identifier: 110833626
GI number: 110833626
Start: 858473
End: 859384
Strand: Direct
Name: mlrA [H]
Synonym: ABO_0765
Alternate gene names: 110833626
Gene position: 858473-859384 (Clockwise)
Preceding gene: 110833625
Following gene: 110833627
Centisome position: 27.51
GC content: 61.29
Gene sequence:
>912_bases ATGAGCGAGTCTACAAGCAGGGTTCAAGTTGCGGACCGACAAGCCGGTAGCATCAGCATTCAGCACGTGAGCATGCACTG CGGTATCCCCGCGGTGACTTTGCGTGCCTGGGAGCGTCGTTATGGTTTGTTGACGCCCGCACGCACGGATAAAGGGCATC GGCGTTATAGCGAAGTGGATATCGCTTGTATCGAGCAGATTCAGCATTGGCTGGAGCGAGGGGTGCCGATCAGTCAGGTG GCGGGGCTACTGGCTGATTCAGCAGCGGCTAACGGGGCGGTGTGGGAACAGGGTGCCGAACAGCAAGGGCCTTGGCGCGG GGCAGTAACAGACGCGATCTGCGCGCTGGAGTCGCTCAACACCCGCCGTCTGGAACAGTTGCTCAATGGGCTGCTGAATG ATTATAGCCATGCTCTGGTACTGGATCACTTTTGTGATCCCGTGCGGGCACGTTTGGCTGACACTTCAGCCCTGGGTGGA TGGCTCACCCTGTTTGACGGTGTGCTGCAGGCCAAGTGGTCGTCGCGGGCATTATCGCTGGCGCCACGGGGTGGGGAGGC CGGCTGGTTGCTGGTGCCGGTGGGGAGAGCCTTGCCGGCACTGGAACTGGCGATGGTATTGAACCGCCCGCTCTGGTGTC TGGGGGCTCCTTTGGTGACGGTAGAACTGCGCAGTGTACTCAAAAGCCTGGCGCAACGGGCCGGTGGTGTGCTCTGGGTG GTGGATCGCTGGCCAACGGCGGCCCAGCGTCAGCAAATCGGTATCGCTTCTGGTTGTGGCCTCAGTGAGGCGTGCTGGGG GCTGGATCTATCGCAAATGACACTGCCGCAAGAGGTAGCCCAGCTTGGCGGGCGTCGGCAGGGGCTGGCGAGCGAACTGG ATCGACTTCAACAATCCTGGAGTACGCCATGA
Upstream 100 bases:
>100_bases CCCTGTTGCGTGGTGCCCTGCGTAAAACCGATCAGCCTTACTTGGCCCAGCAGCGCTATCTTTCCCCGTACCCGGACCCG CTAGGCCTGAGAAATCGGGT
Downstream 100 bases:
>100_bases ATCTGGTCTGGTACCGCAACGACCTGCGTGTCGCGGCACACTCGCCTCTGCACGCTGCGTTGACAGAGTCATCGATAAGC GCGGGTGAGACGAGGCCACA
Product: MerR family transcriptional regulator
Products: NA
Alternate protein names: MerR-like regulator A [H]
Number of amino acids: Translated: 303; Mature: 302
Protein sequence:
>303_residues MSESTSRVQVADRQAGSISIQHVSMHCGIPAVTLRAWERRYGLLTPARTDKGHRRYSEVDIACIEQIQHWLERGVPISQV AGLLADSAAANGAVWEQGAEQQGPWRGAVTDAICALESLNTRRLEQLLNGLLNDYSHALVLDHFCDPVRARLADTSALGG WLTLFDGVLQAKWSSRALSLAPRGGEAGWLLVPVGRALPALELAMVLNRPLWCLGAPLVTVELRSVLKSLAQRAGGVLWV VDRWPTAAQRQQIGIASGCGLSEACWGLDLSQMTLPQEVAQLGGRRQGLASELDRLQQSWSTP
Sequences:
>Translated_303_residues MSESTSRVQVADRQAGSISIQHVSMHCGIPAVTLRAWERRYGLLTPARTDKGHRRYSEVDIACIEQIQHWLERGVPISQV AGLLADSAAANGAVWEQGAEQQGPWRGAVTDAICALESLNTRRLEQLLNGLLNDYSHALVLDHFCDPVRARLADTSALGG WLTLFDGVLQAKWSSRALSLAPRGGEAGWLLVPVGRALPALELAMVLNRPLWCLGAPLVTVELRSVLKSLAQRAGGVLWV VDRWPTAAQRQQIGIASGCGLSEACWGLDLSQMTLPQEVAQLGGRRQGLASELDRLQQSWSTP >Mature_302_residues SESTSRVQVADRQAGSISIQHVSMHCGIPAVTLRAWERRYGLLTPARTDKGHRRYSEVDIACIEQIQHWLERGVPISQVA GLLADSAAANGAVWEQGAEQQGPWRGAVTDAICALESLNTRRLEQLLNGLLNDYSHALVLDHFCDPVRARLADTSALGGW LTLFDGVLQAKWSSRALSLAPRGGEAGWLLVPVGRALPALELAMVLNRPLWCLGAPLVTVELRSVLKSLAQRAGGVLWVV DRWPTAAQRQQIGIASGCGLSEACWGLDLSQMTLPQEVAQLGGRRQGLASELDRLQQSWSTP
Specific function: Transcriptional activator of the csg genes required for production of the curli (AgF) [H]
COG id: COG0789
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH merR-type DNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1788448, Length=152, Percent_Identity=35.5263157894737, Blast_Score=91, Evalue=8e-20, Organism=Escherichia coli, GI1787409, Length=176, Percent_Identity=32.3863636363636, Blast_Score=91, Evalue=1e-19,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009061 - InterPro: IPR000551 [H]
Pfam domain/function: PF00376 MerR [H]
EC number: NA
Molecular weight: Translated: 32903; Mature: 32772
Theoretical pI: Translated: 7.44; Mature: 7.44
Prosite motif: PS50937 HTH_MERR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSESTSRVQVADRQAGSISIQHVSMHCGIPAVTLRAWERRYGLLTPARTDKGHRRYSEVD CCCCCCCEEECCCCCCCEEEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH IACIEQIQHWLERGVPISQVAGLLADSAAANGAVWEQGAEQQGPWRGAVTDAICALESLN HHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHCC TRRLEQLLNGLLNDYSHALVLDHFCDPVRARLADTSALGGWLTLFDGVLQAKWSSRALSL HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE APRGGEAGWLLVPVGRALPALELAMVLNRPLWCLGAPLVTVELRSVLKSLAQRAGGVLWV CCCCCCCCEEEEECCCHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHCCCEEEE VDRWPTAAQRQQIGIASGCGLSEACWGLDLSQMTLPQEVAQLGGRRQGLASELDRLQQSW EECCCCHHHHHHCCCCCCCCCHHHHHCCCHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHC STP CCC >Mature Secondary Structure SESTSRVQVADRQAGSISIQHVSMHCGIPAVTLRAWERRYGLLTPARTDKGHRRYSEVD CCCCCCEEECCCCCCCEEEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH IACIEQIQHWLERGVPISQVAGLLADSAAANGAVWEQGAEQQGPWRGAVTDAICALESLN HHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHCC TRRLEQLLNGLLNDYSHALVLDHFCDPVRARLADTSALGGWLTLFDGVLQAKWSSRALSL HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE APRGGEAGWLLVPVGRALPALELAMVLNRPLWCLGAPLVTVELRSVLKSLAQRAGGVLWV CCCCCCCCEEEEECCCHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHCCCEEEE VDRWPTAAQRQQIGIASGCGLSEACWGLDLSQMTLPQEVAQLGGRRQGLASELDRLQQSW EECCCCHHHHHHCCCCCCCCCHHHHHCCCHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHC STP CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11489123; 9278503 [H]