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The map label for this gene is yebC [C]

Identifier: 110833611

GI number: 110833611

Start: 846743

End: 847486

Strand: Direct

Name: yebC [C]

Synonym: ABO_0750

Alternate gene names: 110833611

Gene position: 846743-847486 (Clockwise)

Preceding gene: 110833610

Following gene: 110833612

Centisome position: 27.14

GC content: 54.44

Gene sequence:

>744_bases
ATGGCAGGACATAGCAAGTGGGCCAACATCAAGCACCGTAAGGCGGCTCAGGATGCCAAGCGTGGCAAGATCTTTACCAA
ACTGATTCGCGAGCTCACGGTAGCGGCCAAGATGGGTGGGGGCGAGCCCAACGATAACCCGCGCTTGCGGGCCGCGATTG
ATAAAGCACTGGGCCAGAACATGACCCGTGACACCATCGACCGTGCGGTTAAGCGTGGCGCCGGCGGTGATGATGACGGC
AGCATGGATGAAATCACCTATGAAGGTTACGGTAAGGGTGGTGTAGCGGTTCTGGTAGAAACCATGACGGACAATGTGAA
CCGTACCGTGGCTGAGGTGCGTCACGCGTTTTCCAAGTTCGGTGGTAATCTGGGCACGAGTGGTTCCGTGGCTTTTTTAT
TCACTAAACGTGGTGAGATTTTTTTCGAGCCCGGTGTGGATGAAGAAAAGCTGATGGAAGTCGCCCTGGAAGCCGGTGCC
GAAGATGTGGAAGAGATGGGAGATGATGGTTTTTTGGTCATTACCACTCCGGATAAGAGCTTTGGTGAAGTGGTGGACTC
CCTGCGTGCAGCTGGGTTGGAATTCGCTGAGGCGGAAGTCACCATGCACCCGTCTACAGAAGCGGAAATGGACACGGATA
CAGCTGAAACCGTGCAAAAGATGATCGACATGCTGGAAGATTTGGACGACGTGCAGAACGTCTACACCAATGCCAGTTGG
CCGGCACCGCAAGAAGAGGAATAG

Upstream 100 bases:

>100_bases
AGGTTGATATAGGAGAAACGCAGGCAGGTATCACGCATCACGCGAAGAGGCGTGCCAGAGACGTGTTGCGTGACGCGTGC
TGCGTGCTGGCGGAGGTAAC

Downstream 100 bases:

>100_bases
CAGCGAGGTTCACGTTACAAAACAAGCTGCAAGCAAAATTAAAAGCCCCGAATCGTTTGGGGCTTTTTGCTGTCTGGGTT
TCTGGGCGTGGCGGTAATCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 246

Protein sequence:

>247_residues
MAGHSKWANIKHRKAAQDAKRGKIFTKLIRELTVAAKMGGGEPNDNPRLRAAIDKALGQNMTRDTIDRAVKRGAGGDDDG
SMDEITYEGYGKGGVAVLVETMTDNVNRTVAEVRHAFSKFGGNLGTSGSVAFLFTKRGEIFFEPGVDEEKLMEVALEAGA
EDVEEMGDDGFLVITTPDKSFGEVVDSLRAAGLEFAEAEVTMHPSTEAEMDTDTAETVQKMIDMLEDLDDVQNVYTNASW
PAPQEEE

Sequences:

>Translated_247_residues
MAGHSKWANIKHRKAAQDAKRGKIFTKLIRELTVAAKMGGGEPNDNPRLRAAIDKALGQNMTRDTIDRAVKRGAGGDDDG
SMDEITYEGYGKGGVAVLVETMTDNVNRTVAEVRHAFSKFGGNLGTSGSVAFLFTKRGEIFFEPGVDEEKLMEVALEAGA
EDVEEMGDDGFLVITTPDKSFGEVVDSLRAAGLEFAEAEVTMHPSTEAEMDTDTAETVQKMIDMLEDLDDVQNVYTNASW
PAPQEEE
>Mature_246_residues
AGHSKWANIKHRKAAQDAKRGKIFTKLIRELTVAAKMGGGEPNDNPRLRAAIDKALGQNMTRDTIDRAVKRGAGGDDDGS
MDEITYEGYGKGGVAVLVETMTDNVNRTVAEVRHAFSKFGGNLGTSGSVAFLFTKRGEIFFEPGVDEEKLMEVALEAGAE
DVEEMGDDGFLVITTPDKSFGEVVDSLRAAGLEFAEAEVTMHPSTEAEMDTDTAETVQKMIDMLEDLDDVQNVYTNASWP
APQEEE

Specific function: Unknown

COG id: COG0217

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TACO1 family

Homologues:

Organism=Homo sapiens, GI27545315, Length=245, Percent_Identity=29.3877551020408, Blast_Score=118, Evalue=4e-27,
Organism=Escherichia coli, GI1788171, Length=237, Percent_Identity=65.8227848101266, Blast_Score=316, Evalue=7e-88,
Organism=Escherichia coli, GI1788294, Length=235, Percent_Identity=37.4468085106383, Blast_Score=155, Evalue=3e-39,
Organism=Caenorhabditis elegans, GI17556100, Length=246, Percent_Identity=25.609756097561, Blast_Score=69, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6321458, Length=265, Percent_Identity=32.8301886792453, Blast_Score=129, Evalue=6e-31,
Organism=Drosophila melanogaster, GI24583305, Length=250, Percent_Identity=27.6, Blast_Score=80, Evalue=9e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y750_ALCBS (Q0VRK0)

Other databases:

- EMBL:   AM286690
- RefSeq:   YP_692470.1
- ProteinModelPortal:   Q0VRK0
- SMR:   Q0VRK0
- STRING:   Q0VRK0
- GeneID:   4212387
- GenomeReviews:   AM286690_GR
- KEGG:   abo:ABO_0750
- NMPDR:   fig|393595.12.peg.753
- eggNOG:   COG0217
- HOGENOM:   HBG715231
- OMA:   VYANFDI
- PhylomeDB:   Q0VRK0
- ProtClustDB:   PRK00110
- BioCyc:   ABOR393595:ABO_0750-MONOMER
- HAMAP:   MF_00693
- InterPro:   IPR002876
- InterPro:   IPR017856
- Gene3D:   G3DSA:1.10.10.200
- PANTHER:   PTHR12532
- TIGRFAMs:   TIGR01033

Pfam domain/function: PF01709 DUF28; SSF75625 DUF28

EC number: NA

Molecular weight: Translated: 26812; Mature: 26681

Theoretical pI: Translated: 4.28; Mature: 4.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGHSKWANIKHRKAAQDAKRGKIFTKLIRELTVAAKMGGGEPNDNPRLRAAIDKALGQN
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCC
MTRDTIDRAVKRGAGGDDDGSMDEITYEGYGKGGVAVLVETMTDNVNRTVAEVRHAFSKF
CCHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCEEEEHHHHCCHHHHHHHHHHHHHHH
GGNLGTSGSVAFLFTKRGEIFFEPGVDEEKLMEVALEAGAEDVEEMGDDGFLVITTPDKS
CCCCCCCCCEEEEEEECCCEEECCCCCHHHHHHHHHHCCHHHHHHCCCCCEEEEECCCHH
FGEVVDSLRAAGLEFAEAEVTMHPSTEAEMDTDTAETVQKMIDMLEDLDDVQNVYTNASW
HHHHHHHHHHHCCCHHHCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
PAPQEEE
CCCCCCC
>Mature Secondary Structure 
AGHSKWANIKHRKAAQDAKRGKIFTKLIRELTVAAKMGGGEPNDNPRLRAAIDKALGQN
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCC
MTRDTIDRAVKRGAGGDDDGSMDEITYEGYGKGGVAVLVETMTDNVNRTVAEVRHAFSKF
CCHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCEEEEHHHHCCHHHHHHHHHHHHHHH
GGNLGTSGSVAFLFTKRGEIFFEPGVDEEKLMEVALEAGAEDVEEMGDDGFLVITTPDKS
CCCCCCCCCEEEEEEECCCEEECCCCCHHHHHHHHHHCCHHHHHHCCCCCEEEEECCCHH
FGEVVDSLRAAGLEFAEAEVTMHPSTEAEMDTDTAETVQKMIDMLEDLDDVQNVYTNASW
HHHHHHHHHHHCCCHHHCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
PAPQEEE
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA