| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110833500
Identifier: 110833500
GI number: 110833500
Start: 708835
End: 709641
Strand: Direct
Name: 110833500
Synonym: ABO_0639
Alternate gene names: NA
Gene position: 708835-709641 (Clockwise)
Preceding gene: 110833499
Following gene: 110833501
Centisome position: 22.72
GC content: 60.47
Gene sequence:
>807_bases ATGAACGAAGCGCAGCGGCAGAGTTATTTGAAGGCCATGGGGTTGACGCCTTGGGTGGCCCGTGTGCCTTTGCCCGGTGC AGCGCCATCGCAGGCGTTGGATTGGCCGGAGGAAGAGCAGAATAGTGCAGCGGCCCCGGCGGGTCCTGCCGTTGATGTGT CCGTAACGACCGTGGCGCAGGGAGAGGCGCCCCTACAGCATTCTGCGTTAGTTTCCCATTCGGCTCCTGCTGATGAGAAG CAAGCACCCACAGGCTTCGCTGCCGATGCGTTGGCGAAGGCTTCCTCCTTCAAGCCTGCTGCTCCTTTAAAAGAGGAGCA GGTAACAACTGCGGCTCCGTCGCCGCCTAAAGAGAAAATCACAGGCCTGAGGTTCACTCTGGAAGCGCACCTGGGGGGCA CTACCTGGTTGCTATGTGCCCAGGAAGACAGTCAGGCTCCAGGGCTGGGGCGGTTCGAAGCGCCACTGATGGCGAGTTTG TTGGCCTTGTTCCAGGGGCGCCCACAGCGTCCGCGTCGTTTCTTTTGCCCGCTGACCGAGCAGCCCATGCCGGCTGATGA AGCCGCTCAGGCGCTATCCGCTTTTGTGGCTGGGCTTAGTGAGCAGAGCGGTGGAGAGCGGGTGTTGTTGTGCTTGCCGG AAGCGGTGGCCGAAGCCTTGTTTAAACAACCTCGCTATCAGCCTTTTGAACTGGGCCAGCTACCGGCGCTGGTGATTAGC AGCCTGGCGGAAATGCTCGCTGATCCGGCCCAACACAAGAAAGCCAGCTGGCAAGCCATGCAGGCTCATGGTTACGATGG CGTTTGA
Upstream 100 bases:
>100_bases TTGGTGTCGGATGTCTGAGGCCTGACGGTAAGGGAGCCGGCGGTGCTCTTCTTGCGTGGTGGGTGGTGCGTCCGGCGTCT GGCGGTACCGGAGGCACTTC
Downstream 100 bases:
>100_bases TGTTGTCGGCCCGATTCGGGCCATGCAGGAATCGGATTTGCCGGCGGTGCTGGAAATTGAACACGCCGCTCAGTTGACCC CTTGGACCCGTAACCACTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 268; Mature: 268
Protein sequence:
>268_residues MNEAQRQSYLKAMGLTPWVARVPLPGAAPSQALDWPEEEQNSAAAPAGPAVDVSVTTVAQGEAPLQHSALVSHSAPADEK QAPTGFAADALAKASSFKPAAPLKEEQVTTAAPSPPKEKITGLRFTLEAHLGGTTWLLCAQEDSQAPGLGRFEAPLMASL LALFQGRPQRPRRFFCPLTEQPMPADEAAQALSAFVAGLSEQSGGERVLLCLPEAVAEALFKQPRYQPFELGQLPALVIS SLAEMLADPAQHKKASWQAMQAHGYDGV
Sequences:
>Translated_268_residues MNEAQRQSYLKAMGLTPWVARVPLPGAAPSQALDWPEEEQNSAAAPAGPAVDVSVTTVAQGEAPLQHSALVSHSAPADEK QAPTGFAADALAKASSFKPAAPLKEEQVTTAAPSPPKEKITGLRFTLEAHLGGTTWLLCAQEDSQAPGLGRFEAPLMASL LALFQGRPQRPRRFFCPLTEQPMPADEAAQALSAFVAGLSEQSGGERVLLCLPEAVAEALFKQPRYQPFELGQLPALVIS SLAEMLADPAQHKKASWQAMQAHGYDGV >Mature_268_residues MNEAQRQSYLKAMGLTPWVARVPLPGAAPSQALDWPEEEQNSAAAPAGPAVDVSVTTVAQGEAPLQHSALVSHSAPADEK QAPTGFAADALAKASSFKPAAPLKEEQVTTAAPSPPKEKITGLRFTLEAHLGGTTWLLCAQEDSQAPGLGRFEAPLMASL LALFQGRPQRPRRFFCPLTEQPMPADEAAQALSAFVAGLSEQSGGERVLLCLPEAVAEALFKQPRYQPFELGQLPALVIS SLAEMLADPAQHKKASWQAMQAHGYDGV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28365; Mature: 28365
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEAQRQSYLKAMGLTPWVARVPLPGAAPSQALDWPEEEQNSAAAPAGPAVDVSVTTVAQ CCHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCCCCEEEEEEEEEC GEAPLQHSALVSHSAPADEKQAPTGFAADALAKASSFKPAAPLKEEQVTTAAPSPPKEKI CCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCHHHH TGLRFTLEAHLGGTTWLLCAQEDSQAPGLGRFEAPLMASLLALFQGRPQRPRRFFCPLTE CCEEEEEEEECCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEECCCCC QPMPADEAAQALSAFVAGLSEQSGGERVLLCLPEAVAEALFKQPRYQPFELGQLPALVIS CCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHCCCCCCCCCCCHHHHHHH SLAEMLADPAQHKKASWQAMQAHGYDGV HHHHHHHCHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MNEAQRQSYLKAMGLTPWVARVPLPGAAPSQALDWPEEEQNSAAAPAGPAVDVSVTTVAQ CCHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCCCCEEEEEEEEEC GEAPLQHSALVSHSAPADEKQAPTGFAADALAKASSFKPAAPLKEEQVTTAAPSPPKEKI CCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCHHHH TGLRFTLEAHLGGTTWLLCAQEDSQAPGLGRFEAPLMASLLALFQGRPQRPRRFFCPLTE CCEEEEEEEECCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEECCCCC QPMPADEAAQALSAFVAGLSEQSGGERVLLCLPEAVAEALFKQPRYQPFELGQLPALVIS CCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHCCCCCCCCCCCHHHHHHH SLAEMLADPAQHKKASWQAMQAHGYDGV HHHHHHHCHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA