| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110833430
Identifier: 110833430
GI number: 110833430
Start: 627820
End: 628452
Strand: Direct
Name: 110833430
Synonym: ABO_0569
Alternate gene names: NA
Gene position: 627820-628452 (Clockwise)
Preceding gene: 110833428
Following gene: 110833431
Centisome position: 20.12
GC content: 57.98
Gene sequence:
>633_bases ATGATGGCACAACGGCAAACTTTACCCGGACCAGCAGGGGAGTTAGAGGTGGTGGTGGAGTACGGTAGTGAGGCGCCGCC GTTCGTCGCCATTGTCTGCCATCCGCATCCGCTGTTCGGGGGCACCATGGATAACAAGGTGGTGACGACCCTGGCCCGCT TGGCCCGTGATGAAGGCGCTGTGGTGGTGCGTTTCAACTTTCGTGGTGTGGGTGAAAGCCAGGGAGCTTACAGTGATGGC ATTGGGGAAACCGAAGATCTGCTGGCCATCCATAGCTGGCTGACACACAAGTATCCGCAATTGCCACTCTGGCTCTCGGG CTTTTCGTTTGGCAGTTTCGTTGCGGCGCGTGGGGCGGAAATTCTCAAGGCTAACGGGGTGCCCGCTCGGGAGCTGTTGT TGGTGGCGCCTCCGGTACACCATTACCCATTTGATGAAATTGAAGACACCGGCTGCCCGGTGACGGTGGTGCAGGGAGAT GATGATGAAGTCGTCCCGGCTGAGCAGGTGTATCGCTGGGCAGAGCAAACCCCATTAGCTCCCGATTTGTTGCGCTTCCC TGATTGCGGCCACTTTTTTCACGGCAAGTTGGTGGACTTAAAACAAGTGGCGGCCAGCCACCTGCCTCGCTAA
Upstream 100 bases:
>100_bases GTATCGCCAAGACGCTGGCGATAACGCTTTGGCTATTGCAGCACAGAGCTGCGCAATCGCCAAGGGTGAAAGGCGTAAAA GGATGGAACAGGAGTAGAAA
Downstream 100 bases:
>100_bases GCGCTGTCGCTCTATGAGTGAATTTCACTCTCTGCCGGTTGTCAGTTGGTGGCCTCAGCGCTACATTGACCGCCCCTTGT GGGGCCTATTTCAGGCCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 210; Mature: 210
Protein sequence:
>210_residues MMAQRQTLPGPAGELEVVVEYGSEAPPFVAIVCHPHPLFGGTMDNKVVTTLARLARDEGAVVVRFNFRGVGESQGAYSDG IGETEDLLAIHSWLTHKYPQLPLWLSGFSFGSFVAARGAEILKANGVPARELLLVAPPVHHYPFDEIEDTGCPVTVVQGD DDEVVPAEQVYRWAEQTPLAPDLLRFPDCGHFFHGKLVDLKQVAASHLPR
Sequences:
>Translated_210_residues MMAQRQTLPGPAGELEVVVEYGSEAPPFVAIVCHPHPLFGGTMDNKVVTTLARLARDEGAVVVRFNFRGVGESQGAYSDG IGETEDLLAIHSWLTHKYPQLPLWLSGFSFGSFVAARGAEILKANGVPARELLLVAPPVHHYPFDEIEDTGCPVTVVQGD DDEVVPAEQVYRWAEQTPLAPDLLRFPDCGHFFHGKLVDLKQVAASHLPR >Mature_210_residues MMAQRQTLPGPAGELEVVVEYGSEAPPFVAIVCHPHPLFGGTMDNKVVTTLARLARDEGAVVVRFNFRGVGESQGAYSDG IGETEDLLAIHSWLTHKYPQLPLWLSGFSFGSFVAARGAEILKANGVPARELLLVAPPVHHYPFDEIEDTGCPVTVVQGD DDEVVPAEQVYRWAEQTPLAPDLLRFPDCGHFFHGKLVDLKQVAASHLPR
Specific function: Unknown
COG id: COG2945
COG function: function code R; Predicted hydrolase of the alpha/beta superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000383 [H]
Pfam domain/function: PF02129 Peptidase_S15 [H]
EC number: NA
Molecular weight: Translated: 22919; Mature: 22919
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMAQRQTLPGPAGELEVVVEYGSEAPPFVAIVCHPHPLFGGTMDNKVVTTLARLARDEGA CCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCC VVVRFNFRGVGESQGAYSDGIGETEDLLAIHSWLTHKYPQLPLWLSGFSFGSFVAARGAE EEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHCCCC ILKANGVPARELLLVAPPVHHYPFDEIEDTGCPVTVVQGDDDEVVPAEQVYRWAEQTPLA EEECCCCCHHHEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCC PDLLRFPDCGHFFHGKLVDLKQVAASHLPR HHHHCCCCCCCCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure MMAQRQTLPGPAGELEVVVEYGSEAPPFVAIVCHPHPLFGGTMDNKVVTTLARLARDEGA CCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCC VVVRFNFRGVGESQGAYSDGIGETEDLLAIHSWLTHKYPQLPLWLSGFSFGSFVAARGAE EEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHCCCC ILKANGVPARELLLVAPPVHHYPFDEIEDTGCPVTVVQGDDDEVVPAEQVYRWAEQTPLA EEECCCCCHHHEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCC PDLLRFPDCGHFFHGKLVDLKQVAASHLPR HHHHCCCCCCCCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]