Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

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The map label for this gene is 110833430

Identifier: 110833430

GI number: 110833430

Start: 627820

End: 628452

Strand: Direct

Name: 110833430

Synonym: ABO_0569

Alternate gene names: NA

Gene position: 627820-628452 (Clockwise)

Preceding gene: 110833428

Following gene: 110833431

Centisome position: 20.12

GC content: 57.98

Gene sequence:

>633_bases
ATGATGGCACAACGGCAAACTTTACCCGGACCAGCAGGGGAGTTAGAGGTGGTGGTGGAGTACGGTAGTGAGGCGCCGCC
GTTCGTCGCCATTGTCTGCCATCCGCATCCGCTGTTCGGGGGCACCATGGATAACAAGGTGGTGACGACCCTGGCCCGCT
TGGCCCGTGATGAAGGCGCTGTGGTGGTGCGTTTCAACTTTCGTGGTGTGGGTGAAAGCCAGGGAGCTTACAGTGATGGC
ATTGGGGAAACCGAAGATCTGCTGGCCATCCATAGCTGGCTGACACACAAGTATCCGCAATTGCCACTCTGGCTCTCGGG
CTTTTCGTTTGGCAGTTTCGTTGCGGCGCGTGGGGCGGAAATTCTCAAGGCTAACGGGGTGCCCGCTCGGGAGCTGTTGT
TGGTGGCGCCTCCGGTACACCATTACCCATTTGATGAAATTGAAGACACCGGCTGCCCGGTGACGGTGGTGCAGGGAGAT
GATGATGAAGTCGTCCCGGCTGAGCAGGTGTATCGCTGGGCAGAGCAAACCCCATTAGCTCCCGATTTGTTGCGCTTCCC
TGATTGCGGCCACTTTTTTCACGGCAAGTTGGTGGACTTAAAACAAGTGGCGGCCAGCCACCTGCCTCGCTAA

Upstream 100 bases:

>100_bases
GTATCGCCAAGACGCTGGCGATAACGCTTTGGCTATTGCAGCACAGAGCTGCGCAATCGCCAAGGGTGAAAGGCGTAAAA
GGATGGAACAGGAGTAGAAA

Downstream 100 bases:

>100_bases
GCGCTGTCGCTCTATGAGTGAATTTCACTCTCTGCCGGTTGTCAGTTGGTGGCCTCAGCGCTACATTGACCGCCCCTTGT
GGGGCCTATTTCAGGCCCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MMAQRQTLPGPAGELEVVVEYGSEAPPFVAIVCHPHPLFGGTMDNKVVTTLARLARDEGAVVVRFNFRGVGESQGAYSDG
IGETEDLLAIHSWLTHKYPQLPLWLSGFSFGSFVAARGAEILKANGVPARELLLVAPPVHHYPFDEIEDTGCPVTVVQGD
DDEVVPAEQVYRWAEQTPLAPDLLRFPDCGHFFHGKLVDLKQVAASHLPR

Sequences:

>Translated_210_residues
MMAQRQTLPGPAGELEVVVEYGSEAPPFVAIVCHPHPLFGGTMDNKVVTTLARLARDEGAVVVRFNFRGVGESQGAYSDG
IGETEDLLAIHSWLTHKYPQLPLWLSGFSFGSFVAARGAEILKANGVPARELLLVAPPVHHYPFDEIEDTGCPVTVVQGD
DDEVVPAEQVYRWAEQTPLAPDLLRFPDCGHFFHGKLVDLKQVAASHLPR
>Mature_210_residues
MMAQRQTLPGPAGELEVVVEYGSEAPPFVAIVCHPHPLFGGTMDNKVVTTLARLARDEGAVVVRFNFRGVGESQGAYSDG
IGETEDLLAIHSWLTHKYPQLPLWLSGFSFGSFVAARGAEILKANGVPARELLLVAPPVHHYPFDEIEDTGCPVTVVQGD
DDEVVPAEQVYRWAEQTPLAPDLLRFPDCGHFFHGKLVDLKQVAASHLPR

Specific function: Unknown

COG id: COG2945

COG function: function code R; Predicted hydrolase of the alpha/beta superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000383 [H]

Pfam domain/function: PF02129 Peptidase_S15 [H]

EC number: NA

Molecular weight: Translated: 22919; Mature: 22919

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMAQRQTLPGPAGELEVVVEYGSEAPPFVAIVCHPHPLFGGTMDNKVVTTLARLARDEGA
CCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCC
VVVRFNFRGVGESQGAYSDGIGETEDLLAIHSWLTHKYPQLPLWLSGFSFGSFVAARGAE
EEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHCCCC
ILKANGVPARELLLVAPPVHHYPFDEIEDTGCPVTVVQGDDDEVVPAEQVYRWAEQTPLA
EEECCCCCHHHEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCC
PDLLRFPDCGHFFHGKLVDLKQVAASHLPR
HHHHCCCCCCCCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MMAQRQTLPGPAGELEVVVEYGSEAPPFVAIVCHPHPLFGGTMDNKVVTTLARLARDEGA
CCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCC
VVVRFNFRGVGESQGAYSDGIGETEDLLAIHSWLTHKYPQLPLWLSGFSFGSFVAARGAE
EEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHCCCC
ILKANGVPARELLLVAPPVHHYPFDEIEDTGCPVTVVQGDDDEVVPAEQVYRWAEQTPLA
EEECCCCCHHHEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCC
PDLLRFPDCGHFFHGKLVDLKQVAASHLPR
HHHHCCCCCCCCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]