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The map label for this gene is yafV [C]

Identifier: 110833396

GI number: 110833396

Start: 590050

End: 590907

Strand: Direct

Name: yafV [C]

Synonym: ABO_0535

Alternate gene names: 110833396

Gene position: 590050-590907 (Clockwise)

Preceding gene: 110833395

Following gene: 110833397

Centisome position: 18.91

GC content: 58.04

Gene sequence:

>858_bases
ATGATGGAGCCAGATGCCGTGGTACACGTTGCTGCAATACAGATGACCAGCGTAGAAAGTGCAAAGGCCAATCTAGAGCA
GGCTGCTCAGCTGTTACAGGAGGCCCATGACCAGGGCGCTAGCCTAGCGGTGCTGCCGGAAAATTTTGCTGGTTATGGCG
TCGATTATCGAGCACTGGCCGCTGAGTATGAAAGGTTGGAACAGTGGCTGTGTGAGCAGGCATCCCGGTTGGGTATGGCG
ATTATTGGCGGTAGCATCCCTTCGTTGACCCGTCCTGACGGAGAACCCGTGCCGGCGCCACGGGTGCGTACTCGCTCTTT
GGCGGTTTCGTCTGAAGGTCAGGTGGTAGGTCGTTACGACAAGCTGCATCTGTTTGATGCCCAGGTACACGATGCCCAGG
GCCAATACAGAGAATCGGATTTTTTCGAGCCAGGTGAAGCCATCGTTACCGCGCCGCTTGGCGGTGTTCAAGTTGGCCTG
GCGATTTGCTACGACCTGCGTTTTCCCGCGCTGGCTCAGCGGCTGACGAGTGCCGGGGCAGAACTGTTGGTATACCCGTC
CGCGTTCACCGCGGTAACCGGTAAGGCGCATTGGGAGCTGCTGCTGCGAGCGACGGCGGTGCAGACGGGCTGTTATGTGC
TGGGCGCCAACCAGTGTGGGCAACATAGCCCGCGTCGTGCCAGTTACGGCCATTCCATGCTAGTGTCACCCTGGGGTGAC
GTGGTAGCAAGTCTGGGGAATGCACCGGGTGTACTTGTGACGCCGTTGGACCTTGCTACCTTGTATGAGCTTCGGCAGCG
TATGCCGGTGCAACAGCATCAACGATTACGTATTGAAGGCCCCTATGACACGAACTGA

Upstream 100 bases:

>100_bases
GAATATGGGGCGATGAATTGGACAAGACCGCGACCATGGAGTACCGAGTAAGTGGTAGCTGGTCGGGCCCCGATGTGTCT
GAGACAGAAGGGATTTTCGA

Downstream 100 bases:

>100_bases
TGACGTTCTTTCTATTGCAGAATCGGTGCTGCTTGCACCTGCTAATCTGAACACCCAGCACCTGGCTTCACTGCTGAATA
ACAAACTCACCGGGCAGGCG

Product: carbon-nitrogen hydrolase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MMEPDAVVHVAAIQMTSVESAKANLEQAAQLLQEAHDQGASLAVLPENFAGYGVDYRALAAEYERLEQWLCEQASRLGMA
IIGGSIPSLTRPDGEPVPAPRVRTRSLAVSSEGQVVGRYDKLHLFDAQVHDAQGQYRESDFFEPGEAIVTAPLGGVQVGL
AICYDLRFPALAQRLTSAGAELLVYPSAFTAVTGKAHWELLLRATAVQTGCYVLGANQCGQHSPRRASYGHSMLVSPWGD
VVASLGNAPGVLVTPLDLATLYELRQRMPVQQHQRLRIEGPYDTN

Sequences:

>Translated_285_residues
MMEPDAVVHVAAIQMTSVESAKANLEQAAQLLQEAHDQGASLAVLPENFAGYGVDYRALAAEYERLEQWLCEQASRLGMA
IIGGSIPSLTRPDGEPVPAPRVRTRSLAVSSEGQVVGRYDKLHLFDAQVHDAQGQYRESDFFEPGEAIVTAPLGGVQVGL
AICYDLRFPALAQRLTSAGAELLVYPSAFTAVTGKAHWELLLRATAVQTGCYVLGANQCGQHSPRRASYGHSMLVSPWGD
VVASLGNAPGVLVTPLDLATLYELRQRMPVQQHQRLRIEGPYDTN
>Mature_285_residues
MMEPDAVVHVAAIQMTSVESAKANLEQAAQLLQEAHDQGASLAVLPENFAGYGVDYRALAAEYERLEQWLCEQASRLGMA
IIGGSIPSLTRPDGEPVPAPRVRTRSLAVSSEGQVVGRYDKLHLFDAQVHDAQGQYRESDFFEPGEAIVTAPLGGVQVGL
AICYDLRFPALAQRLTSAGAELLVYPSAFTAVTGKAHWELLLRATAVQTGCYVLGANQCGQHSPRRASYGHSMLVSPWGD
VVASLGNAPGVLVTPLDLATLYELRQRMPVQQHQRLRIEGPYDTN

Specific function: Unknown

COG id: COG0388

COG function: function code R; Predicted amidohydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 CN hydrolase domain [H]

Homologues:

Organism=Homo sapiens, GI297632350, Length=275, Percent_Identity=41.0909090909091, Blast_Score=191, Evalue=7e-49,
Organism=Homo sapiens, GI297632348, Length=275, Percent_Identity=41.0909090909091, Blast_Score=191, Evalue=8e-49,
Organism=Homo sapiens, GI5031947, Length=275, Percent_Identity=41.0909090909091, Blast_Score=190, Evalue=1e-48,
Organism=Homo sapiens, GI9910460, Length=266, Percent_Identity=36.4661654135338, Blast_Score=160, Evalue=2e-39,
Organism=Homo sapiens, GI297632346, Length=197, Percent_Identity=37.5634517766497, Blast_Score=103, Evalue=2e-22,
Organism=Escherichia coli, GI1786412, Length=239, Percent_Identity=28.0334728033473, Blast_Score=74, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17556280, Length=276, Percent_Identity=36.5942028985507, Blast_Score=170, Evalue=9e-43,
Organism=Saccharomyces cerevisiae, GI6322335, Length=307, Percent_Identity=34.2019543973941, Blast_Score=159, Evalue=4e-40,
Organism=Saccharomyces cerevisiae, GI6323383, Length=281, Percent_Identity=30.9608540925267, Blast_Score=144, Evalue=2e-35,
Organism=Drosophila melanogaster, GI17933642, Length=287, Percent_Identity=37.2822299651568, Blast_Score=164, Evalue=7e-41,
Organism=Drosophila melanogaster, GI21355835, Length=286, Percent_Identity=30.0699300699301, Blast_Score=140, Evalue=9e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003010
- InterPro:   IPR001110 [H]

Pfam domain/function: PF00795 CN_hydrolase [H]

EC number: 3.5.-.- [C]

Molecular weight: Translated: 30821; Mature: 30821

Theoretical pI: Translated: 5.32; Mature: 5.32

Prosite motif: PS50263 CN_HYDROLASE ; PS01227 UPF0012

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMEPDAVVHVAAIQMTSVESAKANLEQAAQLLQEAHDQGASLAVLPENFAGYGVDYRALA
CCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHH
AEYERLEQWLCEQASRLGMAIIGGSIPSLTRPDGEPVPAPRVRTRSLAVSSEGQVVGRYD
HHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHEEEECCCCCEEECCC
KLHLFDAQVHDAQGQYRESDFFEPGEAIVTAPLGGVQVGLAICYDLRFPALAQRLTSAGA
EEEEEECHHCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHCCC
ELLVYPSAFTAVTGKAHWELLLRATAVQTGCYVLGANQCGQHSPRRASYGHSMLVSPWGD
EEEEECCHHHEECCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCEEECCHHH
VVASLGNAPGVLVTPLDLATLYELRQRMPVQQHQRLRIEGPYDTN
HHHHHCCCCCEEECCHHHHHHHHHHHCCCCCHHCCEEECCCCCCC
>Mature Secondary Structure
MMEPDAVVHVAAIQMTSVESAKANLEQAAQLLQEAHDQGASLAVLPENFAGYGVDYRALA
CCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHH
AEYERLEQWLCEQASRLGMAIIGGSIPSLTRPDGEPVPAPRVRTRSLAVSSEGQVVGRYD
HHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHEEEECCCCCEEECCC
KLHLFDAQVHDAQGQYRESDFFEPGEAIVTAPLGGVQVGLAICYDLRFPALAQRLTSAGA
EEEEEECHHCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHCCC
ELLVYPSAFTAVTGKAHWELLLRATAVQTGCYVLGANQCGQHSPRRASYGHSMLVSPWGD
EEEEECCHHHEECCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCEEECCHHH
VVASLGNAPGVLVTPLDLATLYELRQRMPVQQHQRLRIEGPYDTN
HHHHHCCCCCEEECCHHHHHHHHHHHCCCCCHHCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]