| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is hemK [H]
Identifier: 110833385
GI number: 110833385
Start: 576148
End: 576990
Strand: Direct
Name: hemK [H]
Synonym: ABO_0524
Alternate gene names: 110833385
Gene position: 576148-576990 (Clockwise)
Preceding gene: 110833384
Following gene: 110833386
Centisome position: 18.47
GC content: 59.67
Gene sequence:
>843_bases GTGCGCATTGATGACGCCCTGCGCCAGGCTCGCCATCGGTTGGCGTCATCCCCTTGCGCAGCGCTGGATGCCCAAGTGTT GCTTTGCCATGTGCTGGAGCAATCTCGTACATGGCTGTTTACTTGGCCGGAGCGGGAACTGACCAGGGCTCAGCAGGCGG AGTTTGAAGCCCTGCTGGCTCGCCGTGAGCAGGGTGAGCCCGTGGCCCACCTGATTGGAGAGCGGGAGTTTTTTGGCCGC CGGTTTAGTGTAACCGCCGATACTCTGATTCCACGCCCCGATACTGAAACCTTGGTGGAACAGGTGCTTGCGCTGGCATT GCCTGCTAACGCACGGGTCGTGGACTTGGGAACCGGTACCGGTGCTATCGGTATTACCCTCGCTTTGGAGCAGCCGGCTT GGCAGGTGACGCTGGTGGACAATAGCGCGGCGGCGCTGCAAGTGGCAGCGGCAAATGCCCGCCAGTTGGGGGCTACAGTG CGTTGCCTGCAAGGCAGCTGGCTGACCCCCTGTGATGGTTTTTTTGACCTTGTCGTTAGCAACCCTCCTTACATTGAAGA TGGCGACGTCCATTTGGCACAAGGCGATGTGCGTTTCGAGCCTCGCTCGGCCCTAGTGGCCGGCGATCAGGGGTTGGCGG ATCTGATCACCATTGCGCAGCAAGCAGCAGGTAAGCTGGTTGCTGGCGGTTGGTTGTTGCTGGAGCATGGCTTTGAGCAG GGTGACGCGGTACGGGCGTTGTTGGCCGACATTGGCTTTGAAGACGTGCGTACAGAGCAGGATCTGGGCGGAAATGATCG GGTAACCTTAGGCAAGCAATGTGCTGCTGGATCCAAGAGTTGA
Upstream 100 bases:
>100_bases GGTTAAATGAAATCGTTGAAGGAGATTTGGATGAGATTTTGGGTGCGTTGCTGGCAGAGTATCAGGCGGATCAGCTAGCG GCCTTAGGCGAGCATTAACC
Downstream 100 bases:
>100_bases ACATTTGCACAGCAAAGCCAGGAACGGATCTGTTGGGTGCACGAAGTGCAGCAAGCTGTACCATAGAATCCCACGCCTTT GAGTGCCAGGGAGACGATTA
Product: methyltransferase
Products: NA
Alternate protein names: M.VchAHemK2P [H]
Number of amino acids: Translated: 280; Mature: 280
Protein sequence:
>280_residues MRIDDALRQARHRLASSPCAALDAQVLLCHVLEQSRTWLFTWPERELTRAQQAEFEALLARREQGEPVAHLIGEREFFGR RFSVTADTLIPRPDTETLVEQVLALALPANARVVDLGTGTGAIGITLALEQPAWQVTLVDNSAAALQVAAANARQLGATV RCLQGSWLTPCDGFFDLVVSNPPYIEDGDVHLAQGDVRFEPRSALVAGDQGLADLITIAQQAAGKLVAGGWLLLEHGFEQ GDAVRALLADIGFEDVRTEQDLGGNDRVTLGKQCAAGSKS
Sequences:
>Translated_280_residues MRIDDALRQARHRLASSPCAALDAQVLLCHVLEQSRTWLFTWPERELTRAQQAEFEALLARREQGEPVAHLIGEREFFGR RFSVTADTLIPRPDTETLVEQVLALALPANARVVDLGTGTGAIGITLALEQPAWQVTLVDNSAAALQVAAANARQLGATV RCLQGSWLTPCDGFFDLVVSNPPYIEDGDVHLAQGDVRFEPRSALVAGDQGLADLITIAQQAAGKLVAGGWLLLEHGFEQ GDAVRALLADIGFEDVRTEQDLGGNDRVTLGKQCAAGSKS >Mature_280_residues MRIDDALRQARHRLASSPCAALDAQVLLCHVLEQSRTWLFTWPERELTRAQQAEFEALLARREQGEPVAHLIGEREFFGR RFSVTADTLIPRPDTETLVEQVLALALPANARVVDLGTGTGAIGITLALEQPAWQVTLVDNSAAALQVAAANARQLGATV RCLQGSWLTPCDGFFDLVVSNPPYIEDGDVHLAQGDVRFEPRSALVAGDQGLADLITIAQQAAGKLVAGGWLLLEHGFEQ GDAVRALLADIGFEDVRTEQDLGGNDRVTLGKQCAAGSKS
Specific function: Probable protein methyltransferase. May methylate a Gln residue in target proteins [H]
COG id: COG2890
COG function: function code J; Methylase of polypeptide chain release factors
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hemK family [H]
Homologues:
Organism=Homo sapiens, GI7705409, Length=276, Percent_Identity=28.6231884057971, Blast_Score=83, Evalue=2e-16, Organism=Escherichia coli, GI1787463, Length=274, Percent_Identity=47.4452554744526, Blast_Score=237, Evalue=6e-64, Organism=Escherichia coli, GI87082085, Length=190, Percent_Identity=31.0526315789474, Blast_Score=74, Evalue=9e-15, Organism=Drosophila melanogaster, GI24582226, Length=241, Percent_Identity=29.045643153527, Blast_Score=91, Evalue=6e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002052 - InterPro: IPR004556 - InterPro: IPR019874 - InterPro: IPR007848 [H]
Pfam domain/function: PF05175 MTS [H]
EC number: 2.1.1.-
Molecular weight: Translated: 30153; Mature: 30153
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIDDALRQARHRLASSPCAALDAQVLLCHVLEQSRTWLFTWPERELTRAQQAEFEALLA CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHH RREQGEPVAHLIGEREFFGRRFSVTADTLIPRPDTETLVEQVLALALPANARVVDLGTGT HHCCCCHHHHHHCCHHHHCCEEEEEHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCC GAIGITLALEQPAWQVTLVDNSAAALQVAAANARQLGATVRCLQGSWLTPCDGFFDLVVS CEEEEEEEECCCCEEEEEECCCCCEEEEEHHCHHHHHHHHEEECCCCCCCCCCHHHHEEC NPPYIEDGDVHLAQGDVRFEPRSALVAGDQGLADLITIAQQAAGKLVAGGWLLLEHGFEQ CCCCCCCCCEEEECCCEEECCCCEEEECCCCHHHHHHHHHHHCCCEEECCEEEEECCCCC GDAVRALLADIGFEDVRTEQDLGGNDRVTLGKQCAAGSKS CHHHHHHHHHCCHHHHCCHHCCCCCCCEEECCCCCCCCCC >Mature Secondary Structure MRIDDALRQARHRLASSPCAALDAQVLLCHVLEQSRTWLFTWPERELTRAQQAEFEALLA CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHH RREQGEPVAHLIGEREFFGRRFSVTADTLIPRPDTETLVEQVLALALPANARVVDLGTGT HHCCCCHHHHHHCCHHHHCCEEEEEHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCC GAIGITLALEQPAWQVTLVDNSAAALQVAAANARQLGATVRCLQGSWLTPCDGFFDLVVS CEEEEEEEECCCCEEEEEECCCCCEEEEEHHCHHHHHHHHEEECCCCCCCCCCHHHHEEC NPPYIEDGDVHLAQGDVRFEPRSALVAGDQGLADLITIAQQAAGKLVAGGWLLLEHGFEQ CCCCCCCCCEEEECCCEEECCCCEEEECCCCHHHHHHHHHHHCCCEEECCEEEEECCCCC GDAVRALLADIGFEDVRTEQDLGGNDRVTLGKQCAAGSKS CHHHHHHHHHCCHHHHCCHHCCCCCCCEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]