| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110833344
Identifier: 110833344
GI number: 110833344
Start: 525423
End: 527327
Strand: Direct
Name: 110833344
Synonym: ABO_0483
Alternate gene names: NA
Gene position: 525423-527327 (Clockwise)
Preceding gene: 110833343
Following gene: 110833346
Centisome position: 16.84
GC content: 52.76
Gene sequence:
>1905_bases ATGGCGTTTGATTATGGGTCCATTGATTTGGGGCTGCGGAACCCGTTTAAAAAAGAAGGCTTGGTTACTGCGGTAACGGG TGGGCTGAGTGCTTGTGTGGGGCTGGCTGTGCTGCTGATAGCGGCGGCAACGGTGAAGGAAAATACCGTGGCGGGCTGGA TTTATATAGTGTTTGCGGTAGTGCTTCTAGGGGGCGGGGTTCGCGCCTTGAGTGGGGGTGCTTTTGCCATGTTGCGCTAT TTTGTAGGTCGTAACCATCCCACCTCGCTGGCCTATAATTACAGCCCCTCGGAAAGCAGCACTGCGCAGGAAGAGTCCCG TTATGTGGGCTACAAAGGCAGTACGCTAGAAGAAATGTTGATTGGTCGTAAGAATCCCACTTTTGTGGAGCCAGAAGGGT TTCTGGCGCGCGCGCTGCACAGTCTACTTCCTAAGTTGTTGTTCATGCCGTATCCCATTCGTAACCTTGGGCAGCGCTTA TTTGGCGCCTGGGTGAAAACAGCAGTGGCTATCATGGCGTATCTGTTTGTGGCGTTTGTCACGCTGGCGGGTTTTGTCGG TGATATGGGTACCGTGATCTTTCCCCTCTATTCGGTGATCTTGAGCATTTATGTGATTGTGTTGTGGTGGAGAGCCGGTC GCGCTATTGCTCGGCATCCGGAACGGCAGGTGGAGTCCATGGGCGGTGGCGACCTGGTTATGGTGATAGCGGTGTCTATT GTGCTGCCGGTGATGGTGGGTCTTATGCTGGGCTCGGTTTCCCAAGTGGGCAATGTGGGTATTCAGCAGTGGCAGCAGTG GATTAGCGTGCTCGACGGCCTTTATCCGTTAACGTATTTGTTGGTGTCATTGCTGTTTGCTGCAGTGGCTAGCGTGGGCA TTTATCAGCTGCTTCGTCGTCGTTTGGCGTTGGCGAATCCGGTGTCGGAAGTGTCTGAGTTGCGGGAAAATTGGCAGGAG TCGGTGCACCCCAATGAAATTTTTATCAACCTAGATAATCTAGTTATGGCTAACCGTCGTTATAAAGAAGTGCCCAACCG GGTGTATCGGGAACTGGACCCGCAATTGGTTGAACAGGTGGAGGGCAAGGGGGGATTCAAGGGTGAGATGATCCAGGAAA TCCAGCCGAAAGTGAAACCGATGAACTTGGGGGCAGGTTTTGACAAAGTACGAATGGCTCTGCTCATCGGGGGTAATATC TTAGTGCTGATAGCGACAGGGCTAACCTTGTGGTTAGCGTTTGCCACGGTGGATCTTTATGAGGCTTTGGCCCAGCAAGG CGTATCGGTGGAGGCGTTGTTGTCTGGTGATAGCAGTGCACTGTCGTTGGCGGTGAATTTACTGGTGTGGGGCGTTATTT TTAGAGCTTTCGCGGCGCTGTTACGCGGAGCGGCCCACTTGTTTTTTTCTGAAATGCAGTTCGAATCGGTGATGATTTAC TTCAAGTGTGAAGGCACATTTACGGAGTCGAAAATGTCCACGGGTACGGGCATCCATGATAGTACTCGTTCAGAAAATAC CTTAATGCGCAGCAGCATTACACCCTGGATTGTGGTCTCAAGGTTGGTGACGTCCACGTTCGCAGCCACTGGTATGCGTA ACCTTGAATTCCCGCGTTACGTGATGGAAATGCATAAGGCTCCAGAAGCGTTAGCCTCAATTAGGGCTGATGTGGTCACT TTCTTGAAGGACCGCGAGTCCATCGCGTCGATTACAAGTGAGAGGGATTTGGGTAATGCATCGCAAATTTATCAGCTCAA TCAGCAAACTCGAGCTCAGGTGTCACTGCCGACGGCGGGAGCTGATGAGGACGCTGCCGGGTATCTGCGCCAGGAGCAGG CAGCGGACGATGTCGAAGCGAAGCCTAGCAATGGCGGCACCGCGGGAGATGAGCCGGTACCGTAA
Upstream 100 bases:
>100_bases GCTTTTTTTGTTTTTCATGATAGCAACATAAAAGTCTTTAGAATCGATTCACGGAAAAGCGCACGGCCTAATCGGCCGCA CCAAGGAAAGGAGAGTCGCT
Downstream 100 bases:
>100_bases CACGCCTTGCTCGGTCTCCCTCCCGAAGCGGCTCCAAGAGTGAGCCGTTTTTTGTTGTCTGGCGTCAGGTATCACCTAAT TGTGACCAAAACGCATTAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 634; Mature: 633
Protein sequence:
>634_residues MAFDYGSIDLGLRNPFKKEGLVTAVTGGLSACVGLAVLLIAAATVKENTVAGWIYIVFAVVLLGGGVRALSGGAFAMLRY FVGRNHPTSLAYNYSPSESSTAQEESRYVGYKGSTLEEMLIGRKNPTFVEPEGFLARALHSLLPKLLFMPYPIRNLGQRL FGAWVKTAVAIMAYLFVAFVTLAGFVGDMGTVIFPLYSVILSIYVIVLWWRAGRAIARHPERQVESMGGGDLVMVIAVSI VLPVMVGLMLGSVSQVGNVGIQQWQQWISVLDGLYPLTYLLVSLLFAAVASVGIYQLLRRRLALANPVSEVSELRENWQE SVHPNEIFINLDNLVMANRRYKEVPNRVYRELDPQLVEQVEGKGGFKGEMIQEIQPKVKPMNLGAGFDKVRMALLIGGNI LVLIATGLTLWLAFATVDLYEALAQQGVSVEALLSGDSSALSLAVNLLVWGVIFRAFAALLRGAAHLFFSEMQFESVMIY FKCEGTFTESKMSTGTGIHDSTRSENTLMRSSITPWIVVSRLVTSTFAATGMRNLEFPRYVMEMHKAPEALASIRADVVT FLKDRESIASITSERDLGNASQIYQLNQQTRAQVSLPTAGADEDAAGYLRQEQAADDVEAKPSNGGTAGDEPVP
Sequences:
>Translated_634_residues MAFDYGSIDLGLRNPFKKEGLVTAVTGGLSACVGLAVLLIAAATVKENTVAGWIYIVFAVVLLGGGVRALSGGAFAMLRY FVGRNHPTSLAYNYSPSESSTAQEESRYVGYKGSTLEEMLIGRKNPTFVEPEGFLARALHSLLPKLLFMPYPIRNLGQRL FGAWVKTAVAIMAYLFVAFVTLAGFVGDMGTVIFPLYSVILSIYVIVLWWRAGRAIARHPERQVESMGGGDLVMVIAVSI VLPVMVGLMLGSVSQVGNVGIQQWQQWISVLDGLYPLTYLLVSLLFAAVASVGIYQLLRRRLALANPVSEVSELRENWQE SVHPNEIFINLDNLVMANRRYKEVPNRVYRELDPQLVEQVEGKGGFKGEMIQEIQPKVKPMNLGAGFDKVRMALLIGGNI LVLIATGLTLWLAFATVDLYEALAQQGVSVEALLSGDSSALSLAVNLLVWGVIFRAFAALLRGAAHLFFSEMQFESVMIY FKCEGTFTESKMSTGTGIHDSTRSENTLMRSSITPWIVVSRLVTSTFAATGMRNLEFPRYVMEMHKAPEALASIRADVVT FLKDRESIASITSERDLGNASQIYQLNQQTRAQVSLPTAGADEDAAGYLRQEQAADDVEAKPSNGGTAGDEPVP >Mature_633_residues AFDYGSIDLGLRNPFKKEGLVTAVTGGLSACVGLAVLLIAAATVKENTVAGWIYIVFAVVLLGGGVRALSGGAFAMLRYF VGRNHPTSLAYNYSPSESSTAQEESRYVGYKGSTLEEMLIGRKNPTFVEPEGFLARALHSLLPKLLFMPYPIRNLGQRLF GAWVKTAVAIMAYLFVAFVTLAGFVGDMGTVIFPLYSVILSIYVIVLWWRAGRAIARHPERQVESMGGGDLVMVIAVSIV LPVMVGLMLGSVSQVGNVGIQQWQQWISVLDGLYPLTYLLVSLLFAAVASVGIYQLLRRRLALANPVSEVSELRENWQES VHPNEIFINLDNLVMANRRYKEVPNRVYRELDPQLVEQVEGKGGFKGEMIQEIQPKVKPMNLGAGFDKVRMALLIGGNIL VLIATGLTLWLAFATVDLYEALAQQGVSVEALLSGDSSALSLAVNLLVWGVIFRAFAALLRGAAHLFFSEMQFESVMIYF KCEGTFTESKMSTGTGIHDSTRSENTLMRSSITPWIVVSRLVTSTFAATGMRNLEFPRYVMEMHKAPEALASIRADVVTF LKDRESIASITSERDLGNASQIYQLNQQTRAQVSLPTAGADEDAAGYLRQEQAADDVEAKPSNGGTAGDEPVP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 69179; Mature: 69048
Theoretical pI: Translated: 6.21; Mature: 6.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFDYGSIDLGLRNPFKKEGLVTAVTGGLSACVGLAVLLIAAATVKENTVAGWIYIVFAV CCCCCCCEECCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH VLLGGGVRALSGGAFAMLRYFVGRNHPTSLAYNYSPSESSTAQEESRYVGYKGSTLEEML HHHCCCHHHHCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHCCCCCCCHHHHHH IGRKNPTFVEPEGFLARALHSLLPKLLFMPYPIRNLGQRLFGAWVKTAVAIMAYLFVAFV HCCCCCCEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH TLAGFVGDMGTVIFPLYSVILSIYVIVLWWRAGRAIARHPERQVESMGGGDLVMVIAVSI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHCCCCCHHHHHHHHH VLPVMVGLMLGSVSQVGNVGIQQWQQWISVLDGLYPLTYLLVSLLFAAVASVGIYQLLRR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLALANPVSEVSELRENWQESVHPNEIFINLDNLVMANRRYKEVPNRVYRELDPQLVEQV HHHHCCCHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHH EGKGGFKGEMIQEIQPKVKPMNLGAGFDKVRMALLIGGNILVLIATGLTLWLAFATVDLY CCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH EALAQQGVSVEALLSGDSSALSLAVNLLVWGVIFRAFAALLRGAAHLFFSEMQFESVMIY HHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEE FKCEGTFTESKMSTGTGIHDSTRSENTLMRSSITPWIVVSRLVTSTFAATGMRNLEFPRY EEECCCCCHHHHCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHH VMEMHKAPEALASIRADVVTFLKDRESIASITSERDLGNASQIYQLNQQTRAQVSLPTAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCEEECCCCC ADEDAAGYLRQEQAADDVEAKPSNGGTAGDEPVP CCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AFDYGSIDLGLRNPFKKEGLVTAVTGGLSACVGLAVLLIAAATVKENTVAGWIYIVFAV CCCCCCEECCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH VLLGGGVRALSGGAFAMLRYFVGRNHPTSLAYNYSPSESSTAQEESRYVGYKGSTLEEML HHHCCCHHHHCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHCCCCCCCHHHHHH IGRKNPTFVEPEGFLARALHSLLPKLLFMPYPIRNLGQRLFGAWVKTAVAIMAYLFVAFV HCCCCCCEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH TLAGFVGDMGTVIFPLYSVILSIYVIVLWWRAGRAIARHPERQVESMGGGDLVMVIAVSI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHCCCCCHHHHHHHHH VLPVMVGLMLGSVSQVGNVGIQQWQQWISVLDGLYPLTYLLVSLLFAAVASVGIYQLLRR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLALANPVSEVSELRENWQESVHPNEIFINLDNLVMANRRYKEVPNRVYRELDPQLVEQV HHHHCCCHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHH EGKGGFKGEMIQEIQPKVKPMNLGAGFDKVRMALLIGGNILVLIATGLTLWLAFATVDLY CCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH EALAQQGVSVEALLSGDSSALSLAVNLLVWGVIFRAFAALLRGAAHLFFSEMQFESVMIY HHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEE FKCEGTFTESKMSTGTGIHDSTRSENTLMRSSITPWIVVSRLVTSTFAATGMRNLEFPRY EEECCCCCHHHHCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHH VMEMHKAPEALASIRADVVTFLKDRESIASITSERDLGNASQIYQLNQQTRAQVSLPTAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCEEECCCCC ADEDAAGYLRQEQAADDVEAKPSNGGTAGDEPVP CCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA