Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

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The map label for this gene is 110833329

Identifier: 110833329

GI number: 110833329

Start: 509301

End: 509750

Strand: Direct

Name: 110833329

Synonym: ABO_0468

Alternate gene names: NA

Gene position: 509301-509750 (Clockwise)

Preceding gene: 110833328

Following gene: 110833331

Centisome position: 16.32

GC content: 49.56

Gene sequence:

>450_bases
ATGATGTCTGGAAAATCGGTGTGTAAAGGCCGTGATCAGCAAGGCTTTACCCTGATTGAGCTGATGATTGTGGTGGTGAT
AGTGGCGATTCTCGCCTCTATTGCTTACCCCAGTTATACCCGTTATGTGCAGGATACTCGCCAGGCGGAAGCGCAGGGTG
AGATGATGGCCTTGGCTGGTGCACTTGAGCGGTACCGAGCAAAGAACTTTTCCTACAAAGGTGCCAACACTAAGCTGGCA
GTTCTATCGCCAGTGCTTGCCAATAGTGACTATTTCACTACTGCAATCTCCGTGACGGGAACGGGGAGTCAGCAGTATGA
AATTACAGTGACGCCGAAAACGGGCGTAATGACGGGCACCGAAGTGTTGAAGATCAATAGTGAAGGGCAGACATGTATGA
AGGTTTCTGGCTGCACTATTGGCACGGACGATTCTTGGAAAGAACATTAA

Upstream 100 bases:

>100_bases
GACTTGGGTTATACGCACTTAAGAAAACGTCGCTGGTATCAGATGGATAAAACCAAAGCGAATGAATTTAAGGCGCCTTA
AGCGAGTGACGAGGTTGTGT

Downstream 100 bases:

>100_bases
TCGCAGTCTTCCGGTTTGGCCGTCTCCACTCTAGGGCGGCCAATCCAGTTCATGGTAATTCTTCTTGCCGCGACAGGGTT
GCATAGATAAAAGCTGCCAT

Product: secretion protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MMSGKSVCKGRDQQGFTLIELMIVVVIVAILASIAYPSYTRYVQDTRQAEAQGEMMALAGALERYRAKNFSYKGANTKLA
VLSPVLANSDYFTTAISVTGTGSQQYEITVTPKTGVMTGTEVLKINSEGQTCMKVSGCTIGTDDSWKEH

Sequences:

>Translated_149_residues
MMSGKSVCKGRDQQGFTLIELMIVVVIVAILASIAYPSYTRYVQDTRQAEAQGEMMALAGALERYRAKNFSYKGANTKLA
VLSPVLANSDYFTTAISVTGTGSQQYEITVTPKTGVMTGTEVLKINSEGQTCMKVSGCTIGTDDSWKEH
>Mature_149_residues
MMSGKSVCKGRDQQGFTLIELMIVVVIVAILASIAYPSYTRYVQDTRQAEAQGEMMALAGALERYRAKNFSYKGANTKLA
VLSPVLANSDYFTTAISVTGTGSQQYEITVTPKTGVMTGTEVLKINSEGQTCMKVSGCTIGTDDSWKEH

Specific function: Unknown

COG id: COG4968

COG function: function code NU; Tfp pilus assembly protein PilE

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16123; Mature: 16123

Theoretical pI: Translated: 8.02; Mature: 8.02

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSGKSVCKGRDQQGFTLIELMIVVVIVAILASIAYPSYTRYVQDTRQAEAQGEMMALAG
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHH
ALERYRAKNFSYKGANTKLAVLSPVLANSDYFTTAISVTGTGSQQYEITVTPKTGVMTGT
HHHHHHHCCCCCCCCCCEEEEECHHHCCCCEEEEEEEEECCCCCEEEEEECCCCCCCCCC
EVLKINSEGQTCMKVSGCTIGTDDSWKEH
EEEEECCCCCEEEEEECCEECCCCCCCCC
>Mature Secondary Structure
MMSGKSVCKGRDQQGFTLIELMIVVVIVAILASIAYPSYTRYVQDTRQAEAQGEMMALAG
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHH
ALERYRAKNFSYKGANTKLAVLSPVLANSDYFTTAISVTGTGSQQYEITVTPKTGVMTGT
HHHHHHHCCCCCCCCCCEEEEECHHHCCCCEEEEEEEEECCCCCEEEEEECCCCCCCCCC
EVLKINSEGQTCMKVSGCTIGTDDSWKEH
EEEEECCCCCEEEEEECCEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA