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The map label for this gene is xcpQ [H]

Identifier: 110833294

GI number: 110833294

Start: 472196

End: 474328

Strand: Direct

Name: xcpQ [H]

Synonym: ABO_0433

Alternate gene names: 110833294

Gene position: 472196-474328 (Clockwise)

Preceding gene: 110833293

Following gene: 110833297

Centisome position: 15.13

GC content: 51.71

Gene sequence:

>2133_bases
ATGAGTGGTTTTATGACGCCTTTTTTCAGAACGTCTTTATCAAAAATAATGCTGCTGCTAGCGCTGTCCGCTGTCATGGT
GACCTCGCTTCACGCGCAGACAACGAACCAAGTACAGGCCAGCGATGACGGTGAGAGCTGGACGGTAAATATTCGCAATG
CGGACATTCAGGCGTTTATCAGCCAGGTGGCCCAGATGACCGGCAAGAACTTTGTGGTGGATCCGCGGGTTCGTGCGCGG
GATGTCACAGTGGTATCTACTAAATCCCTGACCTCTAATGAGGTGTATGAATTATTTTTGTCCGTATTGCAGGTCCATGG
TTATGCGGCCGTGTCGGTCGGTGACATTACCAAGATTGTGCCTAATACCACAGCTAAACAAAGTAATCTTCCGTTAGTCG
AGAAGGGGAGCTCTTCCGGTGAGGAGCTCGTCACCCGGGTCATTGCGGTTGAGAGCACGCCGGTGGAAGAATTGGTTCCT
GTGCTGCGCCCATTGGTCCCTCAATATGGCCATTTGGCTGCTGTCGGGTCCGCCAATGCACTGATTATCAGCGACCATCT
GGATAACATTCGTCGTATGGAGGCGATTATCTCCAGCCTTGATAGCGCGGAATCGGAAGATGTTCAGGTGCTGAAGTTGA
AACATGCATTTGCCGGTGACATGGTGAAAATGCTGGAAAGCCTGACACCACAGACCGGTGGGCGCGGGGGTAAATCCGCT
GAAGGTGGTGTTATCGTCGTGGCAGATGAGCGGACCAATCGACTGATCATTAAAGGTGACCGTGTTACCCGCCAGCGAAT
GCTACAGATGGTTCGCAGCCTAGACACCGAGGAAACGAACAATAGTGGTGCGAAGGTTATTCGCCTAAGCCATGGTGATG
CCAAGAGCATGGCCGAGTTGTTGAAGAACTTTGTTGATGGTGCCTCGGTGAACAGGGCTGGGGGCGATGGCAAGACGACC
TCCGTTGCGTTGAATAACAACGAGGTGTCGATTCAGGCGGATGAATCGTTGAATGCGCTGGTAGTTCGTGCCAAACCAGC
AATGATGAAACAAATACAATCGGTAATCAGCAAGCTGGATGTGCGCCGGGCACAAATCCTGATTGAGGCGGCCATTGTGG
AAATTTCTGGGGAGCAAGGGAAAAACCTGGGCTTCCAGTATGTAGGCGGTAGCAATGAAGATGGCGTTGGCGCCGTTAAC
TTCGGTGGTAATGGATTAAGCGTCAACTCTGTCGTCCAGGCGCTGGCCTCGGATGATCCGTCTGGACTGAGCCTAGGCGA
TGGGATTACTGCTGGGTTAGGGGAAACCGATTCCGACGGGGACTTGAAATGGGGGGCATTGATTCAAGCTCTATCCACCT
CATCAGATGTGAATCTCCTTTCCACCCCGAGCATTCTAACCCTGGATAATGAAGAAGCGTCCATCATCGTTGGCGAGAAT
GTCCCGTTTGTGACCGGGCAGAGCACCAATACCGGTTCGGGGGTGTCCAACCCATTTACCACGATTCAACGTGAGGACGT
GGGCCTGACGTTAAAAGTTACTCCTCACGTGGCCGGACTCTCTACCATTCGCTTGGAGTTGGAGCAGGAAAGCTCTGCAG
TGAAGGACTCGGCGGGTGATGCCGTTGATATCGTGACGACCACTCGTAAGCTGCAAAGCACCGTATTGGCTGATGATGCA
GAAACCATCGCTCTGGGTGGGCTGATCAAAGATGATATCCGGGTGACGGTTCGAAAAGTGCCGTTTCTAGGCGATATTCC
GGTATTGGGCTTTTTATTTCGCTCAACCAGCAAGGACAGGGTGAAGAGTAATCTGATGGTTTTCCTAAAGCCGACGATTC
TAGGCAATAATGATCGATTGGTAGAAATGAGCCGTGATAAATACATGGGGCTGACGGCCCTTCAATTCCGGCTTAATGAT
GACGGAGAGTTGGAGCAGGTTGAGAAAAACCCTATTCCGCAGAGTTTGGATCATATCTTTGAGGGGCGGACTCCGGTGCC
ACAGGATTTCCGTGATGCCTACTTCAACCAGCAGAATAGACCGGTACCGGCCACCAAAAAAGACATTGAAGATAAGCGAC
CGAAAACGGTACCCGGAGTTGATCGCCAAGCAGAAGGAGATTCTGATCTGTAG

Upstream 100 bases:

>100_bases
GCAACGACGTGGCGGCTCTGCGTTCGTATCAGGACACCCAGAAAGCATCCATTGTGGTGCAACGGGGTGACCAACAATTT
ACCGTGAACTATCCGCCTTA

Downstream 100 bases:

>100_bases
GGCGGCATAGGGTTTTCTGTGGCTAAAAAAACGCGCTTCGGCGCGTTTTTTTATGCGCCACTCTGCGCTTGAAAAACGAC
TTACGATTTATGCAGCATGC

Product: general (type II) secretion pathway protein D

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 710; Mature: 709

Protein sequence:

>710_residues
MSGFMTPFFRTSLSKIMLLLALSAVMVTSLHAQTTNQVQASDDGESWTVNIRNADIQAFISQVAQMTGKNFVVDPRVRAR
DVTVVSTKSLTSNEVYELFLSVLQVHGYAAVSVGDITKIVPNTTAKQSNLPLVEKGSSSGEELVTRVIAVESTPVEELVP
VLRPLVPQYGHLAAVGSANALIISDHLDNIRRMEAIISSLDSAESEDVQVLKLKHAFAGDMVKMLESLTPQTGGRGGKSA
EGGVIVVADERTNRLIIKGDRVTRQRMLQMVRSLDTEETNNSGAKVIRLSHGDAKSMAELLKNFVDGASVNRAGGDGKTT
SVALNNNEVSIQADESLNALVVRAKPAMMKQIQSVISKLDVRRAQILIEAAIVEISGEQGKNLGFQYVGGSNEDGVGAVN
FGGNGLSVNSVVQALASDDPSGLSLGDGITAGLGETDSDGDLKWGALIQALSTSSDVNLLSTPSILTLDNEEASIIVGEN
VPFVTGQSTNTGSGVSNPFTTIQREDVGLTLKVTPHVAGLSTIRLELEQESSAVKDSAGDAVDIVTTTRKLQSTVLADDA
ETIALGGLIKDDIRVTVRKVPFLGDIPVLGFLFRSTSKDRVKSNLMVFLKPTILGNNDRLVEMSRDKYMGLTALQFRLND
DGELEQVEKNPIPQSLDHIFEGRTPVPQDFRDAYFNQQNRPVPATKKDIEDKRPKTVPGVDRQAEGDSDL

Sequences:

>Translated_710_residues
MSGFMTPFFRTSLSKIMLLLALSAVMVTSLHAQTTNQVQASDDGESWTVNIRNADIQAFISQVAQMTGKNFVVDPRVRAR
DVTVVSTKSLTSNEVYELFLSVLQVHGYAAVSVGDITKIVPNTTAKQSNLPLVEKGSSSGEELVTRVIAVESTPVEELVP
VLRPLVPQYGHLAAVGSANALIISDHLDNIRRMEAIISSLDSAESEDVQVLKLKHAFAGDMVKMLESLTPQTGGRGGKSA
EGGVIVVADERTNRLIIKGDRVTRQRMLQMVRSLDTEETNNSGAKVIRLSHGDAKSMAELLKNFVDGASVNRAGGDGKTT
SVALNNNEVSIQADESLNALVVRAKPAMMKQIQSVISKLDVRRAQILIEAAIVEISGEQGKNLGFQYVGGSNEDGVGAVN
FGGNGLSVNSVVQALASDDPSGLSLGDGITAGLGETDSDGDLKWGALIQALSTSSDVNLLSTPSILTLDNEEASIIVGEN
VPFVTGQSTNTGSGVSNPFTTIQREDVGLTLKVTPHVAGLSTIRLELEQESSAVKDSAGDAVDIVTTTRKLQSTVLADDA
ETIALGGLIKDDIRVTVRKVPFLGDIPVLGFLFRSTSKDRVKSNLMVFLKPTILGNNDRLVEMSRDKYMGLTALQFRLND
DGELEQVEKNPIPQSLDHIFEGRTPVPQDFRDAYFNQQNRPVPATKKDIEDKRPKTVPGVDRQAEGDSDL
>Mature_709_residues
SGFMTPFFRTSLSKIMLLLALSAVMVTSLHAQTTNQVQASDDGESWTVNIRNADIQAFISQVAQMTGKNFVVDPRVRARD
VTVVSTKSLTSNEVYELFLSVLQVHGYAAVSVGDITKIVPNTTAKQSNLPLVEKGSSSGEELVTRVIAVESTPVEELVPV
LRPLVPQYGHLAAVGSANALIISDHLDNIRRMEAIISSLDSAESEDVQVLKLKHAFAGDMVKMLESLTPQTGGRGGKSAE
GGVIVVADERTNRLIIKGDRVTRQRMLQMVRSLDTEETNNSGAKVIRLSHGDAKSMAELLKNFVDGASVNRAGGDGKTTS
VALNNNEVSIQADESLNALVVRAKPAMMKQIQSVISKLDVRRAQILIEAAIVEISGEQGKNLGFQYVGGSNEDGVGAVNF
GGNGLSVNSVVQALASDDPSGLSLGDGITAGLGETDSDGDLKWGALIQALSTSSDVNLLSTPSILTLDNEEASIIVGENV
PFVTGQSTNTGSGVSNPFTTIQREDVGLTLKVTPHVAGLSTIRLELEQESSAVKDSAGDAVDIVTTTRKLQSTVLADDAE
TIALGGLIKDDIRVTVRKVPFLGDIPVLGFLFRSTSKDRVKSNLMVFLKPTILGNNDRLVEMSRDKYMGLTALQFRLNDD
GELEQVEKNPIPQSLDHIFEGRTPVPQDFRDAYFNQQNRPVPATKKDIEDKRPKTVPGVDRQAEGDSDL

Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]

COG id: COG1450

COG function: function code NU; Type II secretory pathway, component PulD

Gene ontology:

Cell location: Cell outer membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP D family [H]

Homologues:

Organism=Escherichia coli, GI87082242, Length=672, Percent_Identity=33.6309523809524, Blast_Score=351, Evalue=1e-97,
Organism=Escherichia coli, GI1789793, Length=291, Percent_Identity=24.7422680412371, Blast_Score=78, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001775
- InterPro:   IPR005644
- InterPro:   IPR004846
- InterPro:   IPR013356
- InterPro:   IPR004845 [H]

Pfam domain/function: PF00263 Secretin; PF03958 Secretin_N [H]

EC number: NA

Molecular weight: Translated: 76144; Mature: 76013

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGFMTPFFRTSLSKIMLLLALSAVMVTSLHAQTTNQVQASDDGESWTVNIRNADIQAFI
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEEEEECCHHHHHH
SQVAQMTGKNFVVDPRVRARDVTVVSTKSLTSNEVYELFLSVLQVHGYAAVSVGDITKIV
HHHHHHCCCCEEECCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCEEEEECCCHHHHC
PNTTAKQSNLPLVEKGSSSGEELVTRVIAVESTPVEELVPVLRPLVPQYGHLAAVGSANA
CCCCCCCCCCCEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEECCCCE
LIISDHLDNIRRMEAIISSLDSAESEDVQVLKLKHAFAGDMVKMLESLTPQTGGRGGKSA
EEEEHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCC
EGGVIVVADERTNRLIIKGDRVTRQRMLQMVRSLDTEETNNSGAKVIRLSHGDAKSMAEL
CCCEEEEECCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCHHHHHHH
LKNFVDGASVNRAGGDGKTTSVALNNNEVSIQADESLNALVVRAKPAMMKQIQSVISKLD
HHHHHCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEECCHHHHHHHHHHHHHHH
VRRAQILIEAAIVEISGEQGKNLGFQYVGGSNEDGVGAVNFGGNGLSVNSVVQALASDDP
HHHHHHHEEHEEEEECCCCCCCCCEEEECCCCCCCEEEEEECCCCCCHHHHHHHHHCCCC
SGLSLGDGITAGLGETDSDGDLKWGALIQALSTSSDVNLLSTPSILTLDNEEASIIVGEN
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEECCCCEEEECCCCCEEEEECC
VPFVTGQSTNTGSGVSNPFTTIQREDVGLTLKVTPHVAGLSTIRLELEQESSAVKDSAGD
CCEEECCCCCCCCCCCCCCCEEEECCCCEEEEECCCCCCCEEEEEEEHHHHHHHHCCCCC
AVDIVTTTRKLQSTVLADDAETIALGGLIKDDIRVTVRKVPFLGDIPVLGFLFRSTSKDR
EEEEEHHHHHHHHHHHCCCCCEEEECCEECCCCEEEEEECCCCCCCHHHHHHHHCCCHHH
VKSNLMVFLKPTILGNNDRLVEMSRDKYMGLTALQFRLNDDGELEQVEKNPIPQSLDHIF
HHCCEEEEEEEEEECCCCCEEEECCCCCCCEEEEEEEECCCCCHHHHHCCCCHHHHHHHH
EGRTPVPQDFRDAYFNQQNRPVPATKKDIEDKRPKTVPGVDRQAEGDSDL
CCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SGFMTPFFRTSLSKIMLLLALSAVMVTSLHAQTTNQVQASDDGESWTVNIRNADIQAFI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEEEEECCHHHHHH
SQVAQMTGKNFVVDPRVRARDVTVVSTKSLTSNEVYELFLSVLQVHGYAAVSVGDITKIV
HHHHHHCCCCEEECCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCEEEEECCCHHHHC
PNTTAKQSNLPLVEKGSSSGEELVTRVIAVESTPVEELVPVLRPLVPQYGHLAAVGSANA
CCCCCCCCCCCEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEECCCCE
LIISDHLDNIRRMEAIISSLDSAESEDVQVLKLKHAFAGDMVKMLESLTPQTGGRGGKSA
EEEEHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCC
EGGVIVVADERTNRLIIKGDRVTRQRMLQMVRSLDTEETNNSGAKVIRLSHGDAKSMAEL
CCCEEEEECCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCHHHHHHH
LKNFVDGASVNRAGGDGKTTSVALNNNEVSIQADESLNALVVRAKPAMMKQIQSVISKLD
HHHHHCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEECCHHHHHHHHHHHHHHH
VRRAQILIEAAIVEISGEQGKNLGFQYVGGSNEDGVGAVNFGGNGLSVNSVVQALASDDP
HHHHHHHEEHEEEEECCCCCCCCCEEEECCCCCCCEEEEEECCCCCCHHHHHHHHHCCCC
SGLSLGDGITAGLGETDSDGDLKWGALIQALSTSSDVNLLSTPSILTLDNEEASIIVGEN
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEECCCCEEEECCCCCEEEEECC
VPFVTGQSTNTGSGVSNPFTTIQREDVGLTLKVTPHVAGLSTIRLELEQESSAVKDSAGD
CCEEECCCCCCCCCCCCCCCEEEECCCCEEEEECCCCCCCEEEEEEEHHHHHHHHCCCCC
AVDIVTTTRKLQSTVLADDAETIALGGLIKDDIRVTVRKVPFLGDIPVLGFLFRSTSKDR
EEEEEHHHHHHHHHHHCCCCCEEEECCEECCCCEEEEEECCCCCCCHHHHHHHHCCCHHH
VKSNLMVFLKPTILGNNDRLVEMSRDKYMGLTALQFRLNDDGELEQVEKNPIPQSLDHIF
HHCCEEEEEEEEEECCCCCEEEECCCCCCCEEEEEEEECCCCCHHHHHCCCCHHHHHHHH
EGRTPVPQDFRDAYFNQQNRPVPATKKDIEDKRPKTVPGVDRQAEGDSDL
CCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7934833; 10984043 [H]