| Definition | Shigella flexneri 5 str. 8401 chromosome, complete genome. |
|---|---|
| Accession | NC_008258 |
| Length | 4,574,284 |
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The map label for this gene is ipaH_5
Identifier: 110806091
GI number:
Start: 2219609
End: 2221252
Strand: Direct
Name: ipaH_5
Synonym: SFV_2187
Alternate gene names: NA
Gene position: NA
Preceding gene: 110806090
Following gene: 110806096
Centisome position: NA
GC content: NA
Gene sequence:
>1644_bases ATGCTTCCTGTAAATAATCCCCCCCTATCCACTGGAAACGTCTCTTTTTACAGAACTACATCAATCGACAATGTTCACAA TAATTATCTCTCCGAATGGGTTGAATGGACTAAAAACAGCACTTCCGGAGAAAACAGGGAAACTGCTTTTACCCGGCTCC AATTATGTCTGGAGAACAGTGAAACATCGTTGGACTTATCTTGTTTAGGTCTCAGATCTCTACCACGATTGCCTGACAAT CTTGATGAAATTAATGTAAGCAATAACCAACTATCAATGCTCCCCGAGCTACCAAGGGCATTGAAAGAGCTGAATGCAAG CAGTAATCAATTATCTGCACTTCCTGAATTACCAGTGTCGCTGGAATATATAAATGTGAGTGATAACCATTTGTTCGCAC TTCCTGAATTACCTGCGTCACTAGAATATATTAATGTAAGTGACAATCACCTGTCTGTACTTCCGAGGTTACCAATGTCA TTGGAATTACTTGATGCAGCCAGAAATGCTTTGGAAGTAATACCAGATTTTCCAGAAAGAGATGATCATATTATAAGAAT ATTCTGGCTTAATCAGAACCGGATCACGGCAATTCCGGAAAGCATACTTGGCCTCAGTTCTGATAGCGTTGTCAATCTTA GAGAAAATCAACTATCTCCCAGAATAATGCAAACTTTGTTACAACAAACCGCCCAACCGGACTACCACGGCCCACGGATT TACTTCTCCATGAGTGACGGACAACAGAATACACTCCATCGCCCCCTGGCTGATGCCGTGACAGCATGGTTCCCGGAAAA CAAACAATCTGATGTATCACAGATATGGCATGCTTTTGAACATGAAGAGCACGCCAACACCTTTTCCGCGTTCCTTGACC GCCTTTCCGATACCGTCTCTGCACGCAATACCTCCGGATTCCGTGAACAGGTCGCTGCATGGCTGGAAAAACTCAGTGCC TCTGCGGAGCTTCGACAGCAGTCTTTCGCTGTTGCTGCTGATGCCACTGAAAGCTGTGAGGACCGTGTCGCGCTCACATG GAACAATCTCCGGAAAACCCTCCTGGTCCATCAGGCATCAGAAGGCCTTTTCGATAATGATACCGGCGCTCTGCTCTCCC TGGGCAGGGAAATGTTCCGCCTCGAAATTCTGGAGGATATTGCCCGGGATAAAGTCAGAACTCTCCATTTTGTGGATGAG ATAGAAGTCTACCTGGCCTTCCAGACCATGCTCGCAGAGAAACTTCAGCTCTCCACTGCCGTGAAGGAAATGCGTTTCTA TGGCGTGTCGGGAGTGACAGCAAATGACCTCCGCACTGCCGAAGCCATGGTCAGAAGCCGTGAAGAGAATGAATTTACGG ACTGGTTCTCCCTCTGGGGACCATGGCATGCTGTACTGAAGCGTACGGAAGCTGACCGCTGGGCGCAGGCAGAAGAGCAG AAATATGAGATGCTGGAGAATGAGTACCCTCAGAGGGTGGCTGACCGGCTGAAAGCATCAGGTCTGAGCGGTGATGCGGA TGCGGAGAGGGAAGCCGGTGCACAGGTGATGCGTGAGACTGAACAGCAGATTTACCGTCAGCTGACTGACGAGGTACTGG CCCTGCGATTGTCTGAAAACGGCTCACAACTGCACCATTCATAA
Upstream 100 bases:
>100_bases CTTAAAATGAAAACAATAAATTTCAATCCTGAAACATTTTATTTCAGCTTATTATTCCCCAGTATCACATTTTATCAGGA TATCCTTCTGCGAGGTTATT
Downstream 100 bases:
>100_bases TCACATCGCATAAACCACAGACCGGACTGACTCCGGAAAAACGGAGGCCCGCCCCCGGGCCTCCCCTGATTCATCCGTTT CCCTGTTCAGCCTGACAGCA
Product: invasion plasmid antigen
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>547_residues MLPVNNPPLSTGNVSFYRTTSIDNVHNNYLSEWVEWTKNSTSGENRETAFTRLQLCLENSETSLDLSCLGLRSLPRLPDN LDEINVSNNQLSMLPELPRALKELNASSNQLSALPELPVSLEYINVSDNHLFALPELPASLEYINVSDNHLSVLPRLPMS LELLDAARNALEVIPDFPERDDHIIRIFWLNQNRITAIPESILGLSSDSVVNLRENQLSPRIMQTLLQQTAQPDYHGPRI YFSMSDGQQNTLHRPLADAVTAWFPENKQSDVSQIWHAFEHEEHANTFSAFLDRLSDTVSARNTSGFREQVAAWLEKLSA SAELRQQSFAVAADATESCEDRVALTWNNLRKTLLVHQASEGLFDNDTGALLSLGREMFRLEILEDIARDKVRTLHFVDE IEVYLAFQTMLAEKLQLSTAVKEMRFYGVSGVTANDLRTAEAMVRSREENEFTDWFSLWGPWHAVLKRTEADRWAQAEEQ KYEMLENEYPQRVADRLKASGLSGDADAEREAGAQVMRETEQQIYRQLTDEVLALRLSENGSQLHHS
Sequences:
NA
Specific function: NA
COG id: COG4886
COG function: function code S; Leucine-rich repeat (LRR) protein
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA