| Definition | Shigella flexneri 5 str. 8401 chromosome, complete genome. |
|---|---|
| Accession | NC_008258 |
| Length | 4,574,284 |
Click here to switch to the map view.
The map label for this gene is ybiO
Identifier: 110804808
GI number:
Start: 823298
End: 825241
Strand: Reverse
Name: ybiO
Synonym: SFV_0792
Alternate gene names: NA
Gene position: NA
Preceding gene: 110804809
Following gene: 110804806
Centisome position: NA
GC content: NA
Gene sequence:
>1944_bases GTGCTGCAAAAGGTCACCGAAGTCAGCCGCCATTATGGTGAAGCCCTTTCCGCCCGCTTCGGGCAACTTTATCGCAATAT CACCGGCTCCCCGCATAAGCCATTTAATCCACAAACCTTCAGCAATGCGCTGAGCCATTTTTCAATGTTAGCGGTATTAG TGTTTGGTTTTTACTGGCTGATTCGCCTGTGCGCACTGCCGCTATATCGCAAAATGGGTCAGTGGGCGAGGCAAAAAAAT CGTGAGCGCAGCAACTGGTTGCAGCTTCCGGCGATGATTATTGGGGCGTTTATTATCGACCTGCTGTTACTGGCCCTGAC ATTATTTGTCGGCCAGGTATTAAGCGACAACCTGAATGCAGGCAGTCGCACCATCGCTTTCCAACAAAGTTTGTTTCTCA ACGCCTTTGCCCTGATTGAATTTTTCAAAGCCGTACTACGCCTGATTTTTTGCCCAAACGTGGCGGAGCTGCGCCCGTTC ACGATTCAGGACGAGAGCGCCCGTTACTGGGGTCGTCGCCTGAGCTGGTTAAGCAGCCTGATTGGCTATGGCCTGATTGT GGCCGTGCCGATTATCTCTAATCAGGTGAATGTACAGATAGGTGCGCTGGCGAACGTCATCATTATGCTGTGCATGACCG TCTGGGCGTTGTACCTGATCTTCCGAAATAAAAAAGAGATTACCCAGCATTTGCTCAACTTTGCGGAGCATTCGCTGGCT TTTTTCAGCCTGTTTATCCGCGCCTTTGCGCTGGTGTGGCACTGGCTGGCAAGCGCCTATTTTATCGTGCTGTTTTTCTT TTCGTTGTTCGATCCGGGCAACAGTCTGAAATTTATGATGGGTGCAACGGTGCGCAGCCTGGCGATTATTGGTATCGCAG CGTTTGTTTCCGGTATGTTTTCCCGCTGGCTGGCGAAAACCATCACCCTCTCGCCACATACTCAGCGTAACTATCCGGAG CTACAAAAACGGCTGAATGGCTGGCTTTCGGCGGCGCTGAAAACGGCGCGTATTCTGACCGTCTGCGTGGCAGTAATGTT GCTGTTGAGCGCATGGGGATTGTTCGATTTCTGGAACTGGCTGCAAAACGGCGCGGGGCAGAAAACCGTAGATATCCTGA TCCGCATCGCACTCATTCTTTTCTTCTCGGCGGTTGGCTGGACGGTGCTCGCCAGTTTGATCGAAAACCGGCTGGCTTCG GATATTCATGGCCGCCCGCTACCCAGCGCCCGTACGCGTACCCTGCTGACGCTGTTCCGTAACGCGCTGGCGGTGATTAT CAGTACCATCACCATCATGATTGTGTTGTCGGAAATCGGCGTCAATATCGCGCCATTGCTGGCAGGTGCCGGGGCATTAG GTCTGGCTATCTCGTTTGGTTCGCAAACGCTGGTAAAAGATATTATCACCGGGGTATTTATTCAGTTTGAAAACGGCATG AACACTGGAGATTTGGTGACTATCGGGCCGTTGACCGGCACAGTGGAACGGATGTCGATTCGCTCCGTGGGCGTGCGCCA GGATACCGGGGCGTATCACATCATTCCGTGGTCTTCGATAACCACCTTTGCTAACTTCGTCCGCGGTATTGGTTCGGTAG TGGCAAACTACGATGTTGATCGCCATGAAGATGCTGATAAAGCCAATCAGGCACTGAAAGATGCGGTAACGGAATTGATG GAAAACGAAGAAATTCGCGGGCTGATTATTGGTGAACCGAACTTTGCCGGGATTGTCGGCTTAAGCAATACCGCGTTTAC ACTGCGTGTTTCGTTCACCACGCTGCCACTCAAACAGTGGACGGTACGCTTTGCCCTCGACAGCCAGGTGAAAAAACATT TCGACCTAGCGGGCGTTCGCGCGCCAGTGCAGACTTATCAGGTGCTGCCTGCTCCGGGCGCGACCCCGGCTGAACCGCTG CCGCCGGGGGAGCCAACGCTTTAA
Upstream 100 bases:
>100_bases GCGTAAAGAGTTGATCGACCAGTTGCGTACTGTCGCCGCGACGCCCCCTGCGGAACCGGTCCCGAAGATCGTGCCGCCGA CGCTGGTTGAAGAGCAAACC
Downstream 100 bases:
>100_bases CGTTGGCGATTAACAAAACGGCGGCGCTGCTCGTCGTTCATAAAGGTCCAGGCAATAAAGCGACTCTGCTTTTGCCCCTG GGCCATCTCTTTTTTTACCA
Product: putative transport protein
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>647_residues MLQKVTEVSRHYGEALSARFGQLYRNITGSPHKPFNPQTFSNALSHFSMLAVLVFGFYWLIRLCALPLYRKMGQWARQKN RERSNWLQLPAMIIGAFIIDLLLLALTLFVGQVLSDNLNAGSRTIAFQQSLFLNAFALIEFFKAVLRLIFCPNVAELRPF TIQDESARYWGRRLSWLSSLIGYGLIVAVPIISNQVNVQIGALANVIIMLCMTVWALYLIFRNKKEITQHLLNFAEHSLA FFSLFIRAFALVWHWLASAYFIVLFFFSLFDPGNSLKFMMGATVRSLAIIGIAAFVSGMFSRWLAKTITLSPHTQRNYPE LQKRLNGWLSAALKTARILTVCVAVMLLLSAWGLFDFWNWLQNGAGQKTVDILIRIALILFFSAVGWTVLASLIENRLAS DIHGRPLPSARTRTLLTLFRNALAVIISTITIMIVLSEIGVNIAPLLAGAGALGLAISFGSQTLVKDIITGVFIQFENGM NTGDLVTIGPLTGTVERMSIRSVGVRQDTGAYHIIPWSSITTFANFVRGIGSVVANYDVDRHEDADKANQALKDAVTELM ENEEIRGLIIGEPNFAGIVGLSNTAFTLRVSFTTLPLKQWTVRFALDSQVKKHFDLAGVRAPVQTYQVLPAPGATPAEPL PPGEPTL
Sequences:
NA
Specific function: NA
COG id: NA
COG function: NA
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA