Definition Shigella flexneri 5 str. 8401 chromosome, complete genome.
Accession NC_008258
Length 4,574,284

Click here to switch to the map view.

The map label for this gene is ybiO

Identifier: 110804808

GI number:

Start: 823298

End: 825241

Strand: Reverse

Name: ybiO

Synonym: SFV_0792

Alternate gene names: NA

Gene position: NA

Preceding gene: 110804809

Following gene: 110804806

Centisome position: NA

GC content: NA

Gene sequence:

>1944_bases
GTGCTGCAAAAGGTCACCGAAGTCAGCCGCCATTATGGTGAAGCCCTTTCCGCCCGCTTCGGGCAACTTTATCGCAATAT
CACCGGCTCCCCGCATAAGCCATTTAATCCACAAACCTTCAGCAATGCGCTGAGCCATTTTTCAATGTTAGCGGTATTAG
TGTTTGGTTTTTACTGGCTGATTCGCCTGTGCGCACTGCCGCTATATCGCAAAATGGGTCAGTGGGCGAGGCAAAAAAAT
CGTGAGCGCAGCAACTGGTTGCAGCTTCCGGCGATGATTATTGGGGCGTTTATTATCGACCTGCTGTTACTGGCCCTGAC
ATTATTTGTCGGCCAGGTATTAAGCGACAACCTGAATGCAGGCAGTCGCACCATCGCTTTCCAACAAAGTTTGTTTCTCA
ACGCCTTTGCCCTGATTGAATTTTTCAAAGCCGTACTACGCCTGATTTTTTGCCCAAACGTGGCGGAGCTGCGCCCGTTC
ACGATTCAGGACGAGAGCGCCCGTTACTGGGGTCGTCGCCTGAGCTGGTTAAGCAGCCTGATTGGCTATGGCCTGATTGT
GGCCGTGCCGATTATCTCTAATCAGGTGAATGTACAGATAGGTGCGCTGGCGAACGTCATCATTATGCTGTGCATGACCG
TCTGGGCGTTGTACCTGATCTTCCGAAATAAAAAAGAGATTACCCAGCATTTGCTCAACTTTGCGGAGCATTCGCTGGCT
TTTTTCAGCCTGTTTATCCGCGCCTTTGCGCTGGTGTGGCACTGGCTGGCAAGCGCCTATTTTATCGTGCTGTTTTTCTT
TTCGTTGTTCGATCCGGGCAACAGTCTGAAATTTATGATGGGTGCAACGGTGCGCAGCCTGGCGATTATTGGTATCGCAG
CGTTTGTTTCCGGTATGTTTTCCCGCTGGCTGGCGAAAACCATCACCCTCTCGCCACATACTCAGCGTAACTATCCGGAG
CTACAAAAACGGCTGAATGGCTGGCTTTCGGCGGCGCTGAAAACGGCGCGTATTCTGACCGTCTGCGTGGCAGTAATGTT
GCTGTTGAGCGCATGGGGATTGTTCGATTTCTGGAACTGGCTGCAAAACGGCGCGGGGCAGAAAACCGTAGATATCCTGA
TCCGCATCGCACTCATTCTTTTCTTCTCGGCGGTTGGCTGGACGGTGCTCGCCAGTTTGATCGAAAACCGGCTGGCTTCG
GATATTCATGGCCGCCCGCTACCCAGCGCCCGTACGCGTACCCTGCTGACGCTGTTCCGTAACGCGCTGGCGGTGATTAT
CAGTACCATCACCATCATGATTGTGTTGTCGGAAATCGGCGTCAATATCGCGCCATTGCTGGCAGGTGCCGGGGCATTAG
GTCTGGCTATCTCGTTTGGTTCGCAAACGCTGGTAAAAGATATTATCACCGGGGTATTTATTCAGTTTGAAAACGGCATG
AACACTGGAGATTTGGTGACTATCGGGCCGTTGACCGGCACAGTGGAACGGATGTCGATTCGCTCCGTGGGCGTGCGCCA
GGATACCGGGGCGTATCACATCATTCCGTGGTCTTCGATAACCACCTTTGCTAACTTCGTCCGCGGTATTGGTTCGGTAG
TGGCAAACTACGATGTTGATCGCCATGAAGATGCTGATAAAGCCAATCAGGCACTGAAAGATGCGGTAACGGAATTGATG
GAAAACGAAGAAATTCGCGGGCTGATTATTGGTGAACCGAACTTTGCCGGGATTGTCGGCTTAAGCAATACCGCGTTTAC
ACTGCGTGTTTCGTTCACCACGCTGCCACTCAAACAGTGGACGGTACGCTTTGCCCTCGACAGCCAGGTGAAAAAACATT
TCGACCTAGCGGGCGTTCGCGCGCCAGTGCAGACTTATCAGGTGCTGCCTGCTCCGGGCGCGACCCCGGCTGAACCGCTG
CCGCCGGGGGAGCCAACGCTTTAA

Upstream 100 bases:

>100_bases
GCGTAAAGAGTTGATCGACCAGTTGCGTACTGTCGCCGCGACGCCCCCTGCGGAACCGGTCCCGAAGATCGTGCCGCCGA
CGCTGGTTGAAGAGCAAACC

Downstream 100 bases:

>100_bases
CGTTGGCGATTAACAAAACGGCGGCGCTGCTCGTCGTTCATAAAGGTCCAGGCAATAAAGCGACTCTGCTTTTGCCCCTG
GGCCATCTCTTTTTTTACCA

Product: putative transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>647_residues
MLQKVTEVSRHYGEALSARFGQLYRNITGSPHKPFNPQTFSNALSHFSMLAVLVFGFYWLIRLCALPLYRKMGQWARQKN
RERSNWLQLPAMIIGAFIIDLLLLALTLFVGQVLSDNLNAGSRTIAFQQSLFLNAFALIEFFKAVLRLIFCPNVAELRPF
TIQDESARYWGRRLSWLSSLIGYGLIVAVPIISNQVNVQIGALANVIIMLCMTVWALYLIFRNKKEITQHLLNFAEHSLA
FFSLFIRAFALVWHWLASAYFIVLFFFSLFDPGNSLKFMMGATVRSLAIIGIAAFVSGMFSRWLAKTITLSPHTQRNYPE
LQKRLNGWLSAALKTARILTVCVAVMLLLSAWGLFDFWNWLQNGAGQKTVDILIRIALILFFSAVGWTVLASLIENRLAS
DIHGRPLPSARTRTLLTLFRNALAVIISTITIMIVLSEIGVNIAPLLAGAGALGLAISFGSQTLVKDIITGVFIQFENGM
NTGDLVTIGPLTGTVERMSIRSVGVRQDTGAYHIIPWSSITTFANFVRGIGSVVANYDVDRHEDADKANQALKDAVTELM
ENEEIRGLIIGEPNFAGIVGLSNTAFTLRVSFTTLPLKQWTVRFALDSQVKKHFDLAGVRAPVQTYQVLPAPGATPAEPL
PPGEPTL

Sequences:
NA

Specific function: NA

COG id: NA

COG function: NA

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA