Click here to switch to the map view.

The map label for this gene is sbcC

Identifier: 110804420

GI number:

Start: 376216

End: 379359

Strand: Reverse

Name: sbcC

Synonym: SFV_0362

Alternate gene names: NA

Gene position: NA

Preceding gene: 110804421

Following gene: 110804419

Centisome position: NA

GC content: NA

Gene sequence:

>3144_bases
ATGAAAATTCTCAGCCTGCGCCTGAAAAACCTGAACTCATTAAAAGGCGAATGGAAGATTGATTTCACCCGCGAGCCGTT
CGCCAGCAACGGGCTGTTTGCCATTACCGGCCCAACCGGTGCGGGGAAAACCACCCTGCTGGACGCCATTTGTCTGGCGC
TGTATCACGAAACTCCGCGTCTCTCTAACGTTTCACAATCGCAAAATGATCTCATGACCCGCGATACCGCTGAATGTCTG
GCGGAGGTGGAGTTTGAAGTGAAAGGTGAAGCGTATCGCGCGTTCTGGAGCCAGAATCGGGCGCGTAACCAGCCGGACGG
TAATTTGCAGGTGCCTCGCGTAGAGCTGGCGCGCTGCGCCGACGGCAAAATTCTCGCCGACAAAGTGAAAGATAAGCTGG
AACTGACAGCGACGTTAACCGGGCTGGATTACGGGCGCTTCACCCGTTCGATGCTGCTTTCGCAGGGGCAATTTGCTGCC
TTCCTGAATGCCAAACCCAAAGAACGCGCGGAATTGCTCGAGGAGTTAACCGGCACTGAAATCTACGGGCAAATCTCGGC
GATGGTTTTTGAGCAGCACAAATCGGCCCGCACTGAGCTGGAGAAGCTGCAAGCGCAGGCCAGCGGCGTCACGTTGCTCA
CGCCGGAACAAGTGCAATCGCTGACAGCGAGTTTGCAGGTACTTACTGACGAAGAAAAACAGTTAATTACCGCGCAGCAG
CAAGAACAACAATCGCTAAACTGGTTAACGCGTCAGGACGAATTGCAGCAAGAAGCCAGCCGCCGTCAGCAGGCCTTGCA
ACAGGCGTTAGCCGAAGAAGAAAAAGCGCAACCTCAACTGGCGGCGCTTAGTCTGGCACAACCGGCACGAAATCTTCGTC
CACACTGGGAACGCATCGCAGAACACAGCGCGGCGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTA
CAGAGCACAATGGCGCTTCGCGCGAGCATTCGCCACCACGCGGCGAAGCAGTCAGCAGAATTACAGCAGCAGCAACAAAG
CCTGAATACCTGGTTACAGGAACACGACCGCTTCCGTCAGTGGAACAACGAACTGGCGGGTTGGCGTGCGCAGTTCTCCC
AACAAACCAGCGATCGCGAGCATCTGCGGCAATGGCAGCAACAGTTAACCCATGCTGAGCAAAAACTTAATGCGCTTGCG
GCGATCACGTTGACGTTAACCGCCGATGAAGTTGCTACCGCCCTGGCGCAACATGCCGAGCAACGCCCACTGCGTCAGCG
CCTGGTCGCGCTGCATGGGCAGATTGTTCCCCAACAAAAACGTCTGGCGCAGTTAATGGTCACTATCCAGAATGTCACTC
TGGAACAGACGCAACGTAATGTCGCACTTAACGAAATGCGCCAGCGTTATAAAGAAAAGACGCAGCAACTTGCCGATGTG
AAAACCATTTGCGAGCAGGAAGCGCGCATCAAAACGCTGGAAGCCCAGCGTGCACAGTTACAGGCGGGTCAGCCTTGTCC
ACTTTGTGGTTCCACCAGCCACCCGGCGGTCGAGGCGTATCAGGCGCTGGAGCCTGGTGTTAATCAGTCTCGATTACTGG
CGCTGGAAAACGAAGTTAAAAAGCTCGGCGAAGAAGGTGCGGCGCTGCGCGGGCAACTGGATGCATTAACGAAGCAGCTT
CAGCGCGATGAAAACGAAGCGCAAAGCCTCCGACAAGATGAGCAAGCACTTACTCAACAATGGCAAGCCGTCACGGCCAG
CCTCAATATCACCTTGCAGCCACAGGACGATATTCAACCGTGGCTGGATGCACAAGATGAGCACGAACGCCAGCTGCGGT
TACTCAGCCAACGACATGAATTACAAGGGCAGATTGCCGCGCATAATCAGCAAATTATCCAGTATCAACAGCAAATTGAA
CAACGTCAGCAGCAGCTCTTAACGGCATTGGCGGGTTATGCACTGACATTGCCACAGGAAGATGAAGAAGAGAGCTGGTT
GGCGACACGTCAGCAAGAAGCGCAGAGCTGGCAGCAACGCCAGAACGAATTAACCGCGCTGCAAAACCGTATTCAGCAGC
TGACACCGATTCTGGAAACGTTGCCGCAAAGTGATGATCTCCCGCACAGCGAAGAAACTGTGGCGCTGGATAACTGGCGG
CAGGTTCATGAACAATGTCTCGCATTACACAGCCAGCAGCAGACGTTACAGCAACAGGATGTTCTGGCGGCGCAAAGTCT
GCAAAAAGCCCAAGCGCAGTTTGACACCGCGCTACAGGCCAGCGTCTTTGACGATCAGCAGGCGTTCCTTGCGGCGCTAA
TGGATGAACAAACACTAACGCAGCTGGAACAGCTCAAGCAGAATCTGGAAAACCAGCGCCGTCAGGCGCAAACGCTGGTC
ACTCAGACAGCAGAAACGCTGGCACAGCATCAACAACACCGACCTGACGGGTTGGCTCTCACTGTGACGGTGGAGCAGAT
TCAGCAAGAGTTAGCGCAAACTCACCAAAAGTTGCGTGAAAACACCACGAGTCAAGGCGAGATTCGCCAGCAGCTGAAGC
AGGATGCAGATAACCGTCAGCAACAACAAACCTTAATGCAGCAAATTGCTCAAATGACGCAGCAGGTTGAGGACTGGGGA
TATCTGAATTCGCTAATAGGTTCCAAAGAGGGCGATAAATTCCGCAAGTTTGCCCAGAGGCTGACGCTGGATAATTTAGT
CCATCTCGCTAATCAGCAACTTACCCGGCTGCACGGGCGCTATCTGTTACAGCGCAAAGCCAGCGAGGCGCTGGAAGTCG
AGGTTGTTGATACCTGGCAGGCAGATGCGGTACGCGATACCCGTACCCTTTCCGGCGGCGAAAGTTTCCTCGTTAGTCTG
GCGCTGGCGCTGGCGCTTTCGGATCTGGTCAGCCATAAAACACGTATTGACTCGCTGTTCCTTGATGAAGGTTTTGGCAC
GCTGGATAGCGAAACGCTGGATACCGCCCTTGATGCGCTGGATGCCCTGAACGCCAGTGGCAAAACCATCGGTGTGATTA
GCCACGTAGAAGCGATGAAAGAGCGTATTCCGGTGCAGATCAAAGTGAAAAAGATCAACGGCCTGGGCTACAGCAAACTG
GAAAGTACGTTTGCAGTGAAATAA

Upstream 100 bases:

>100_bases
ATCGCCGTCTGGCACTGGAAGAACTGGATGAATCGCAGCAGCAACGTCTGCAGCATCTTTTCACCACGACGTTGCGTACC
CTCGCCGGAGAACACGAAGC

Downstream 100 bases:

>100_bases
CTATTCAGCAGGATAATGAATACAGAGGGGTGAATTATCTCTTGGCCTTGCTGGTCGTTATCCTGCAAGCTATCACTTTA
TTGGCTACGGTGATTGGTAG

Product: exonuclease subunit SbcC

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1047_residues
MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPRLSNVSQSQNDLMTRDTAECL
AEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAA
FLNAKPKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ
QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRL
QSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALA
AITLTLTADEVATALAQHAEQRPLRQRLVALHGQIVPQQKRLAQLMVTIQNVTLEQTQRNVALNEMRQRYKEKTQQLADV
KTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGAALRGQLDALTKQL
QRDENEAQSLRQDEQALTQQWQAVTASLNITLQPQDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIE
QRQQQLLTALAGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDDLPHSEETVALDNWR
QVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLV
TQTAETLAQHQQHRPDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWG
YLNSLIGSKEGDKFRKFAQRLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSL
ALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKL
ESTFAVK

Sequences:
NA

Specific function: NA

COG id: COG0419

COG function: function code L; ATPase involved in DNA repair

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA