| Definition | Shigella flexneri 5 str. 8401 chromosome, complete genome. |
|---|---|
| Accession | NC_008258 |
| Length | 4,574,284 |
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The map label for this gene is hepA
Identifier: 110804123
GI number:
Start: 57953
End: 60859
Strand: Reverse
Name: hepA
Synonym: SFV_0051
Alternate gene names: NA
Gene position: NA
Preceding gene: 110804124
Following gene: 110804122
Centisome position: NA
GC content: NA
Gene sequence:
>2907_bases ATGCCTTTTACACTTGGTCAACGCTGGATCAGCGATACAGAAAGCGAATTGGGACTTGGAACCGTTGTCGCGGTGGATGC GCGAACTGTCACTTTACTTTTCCCATCTACTGGTGAAAACCGTCTGTACGCACGCAGTGATTCCCCCGTGACCCGCGTGA TGTTCAACCCTGGTGATACCATTACCAGCCATGACGGCTGGCAGATGCAAGTCGAAGAAGTAAAAGAAGAAAATGGCTTG CTGACCTATATCGGTACTCGCCTGGATACTGAAGAGTCCGGCGTAGCCCTGCGTGAAGTTTTCCTTGATAGCAAACTGGT GTTCAGCAAACCGCAGGACCGTCTGTTTGCCGGGCAGATTGACCGTATGGACCGCTTTGCGCTGCGTTATCGCGCGCGTA AGTATTCCAGCGAACAGTTCCGTATGCCGTACAGCGGCCTGCGCGGTCAGCGTACCAGCCTGATCCCGCATCAGCTCAAC ATCGCTCATGATGTTGGTCGCCGCCACGCGCCGCGCGTCCTGCTGGCTGACGAAGTGGGTTTAGGGAAAACCATTGAAGC CGGGATGATCCTGCATCAGCAACTGCTCTCTGGCGCTGCTGAACGTGTGCTGATTATCGTCCCGGAAACCTTACAGCATC AGTGGCTGGTAGAAATGCTGCGCCGTTTCAACCTGCGCTTTGCTCTGTTTGATGATGAGCGTTATGCCGAAGCTCAGCAC GATGCTTACAACCCGTTTGACACCGAACAGCTGGTGATTTGCTCGCTGGATTTTGCCCGTCGTAGCAAACAGCGCTTGGA ACATCTCTGTGAAGCCGAATGGGACCTGCTGGTGGTCGATGAAGCGCATCACCTGGTGTGGAGCGAAGATGCGCCAAGCC GTGAATATCAGGCCATTGAACAACTGGCAGAGCACGTGCCGGGCGTTCTGCTGCTGACCGCGACCCCGGAACAGCTGGGG ATGGAAAGCCACTTCGCCCGTCTGCGTCTGCTGGACCCGAACCGTTTCCACGATTTTGCGCAGTTCGTTGAAGAGCAGAA AAATTATCGTCCGGTTGCGGACGCCGTTGCCATGCTGCTGGCAGGTAACAAACTGAGCAATGACGAACTGAACATGCTCG GCGAGATGATCGGCGAGCAGGATATCGAGCCGCTGTTGCAGGCAGCAAACAGCGACAGCGAAGATGCCCAGAGCGCCCGT CAGGAGCTGGTTTCGATGCTGATGGATCGCCACGGCACCAGCCGCGTGCTGTTCCGTAACACGCGTAACGGTGTGAAAGG ATTCCCGAAACGCGAGCTGCACACCATTAAGCTGCCGCTACCGACGCAGTATCAGACGGCTATTAAAGTCTCCGGCATTA TGGGCGCACGTAAAAGTGCGGAAGATCGTGCTCGCGATATGCTCTACCCGGAGCGTATTTATCAGGAATTTGAAGGTGAT AACGCCACCTGGTGGAACTTCGATCCGCGCGTTGAGTGGCTGATGGGCTACCTGACCAGCCATCGCTCTCAGAAAGTGCT GGTGATCTGCGCCAAAGCTGCCACTGCGCTGCAACTGGAGCAGGTACTGCGCGAACGTGAAGGTATTCGCGCTGCGGTGT TCCACGAAGGTATGTCGATTATCGAACGTGACCGCGCTGCCGCCTGGTTTGCCGAAGAAGACACCGGCGCACAGGTACTG CTGTGCTCAGAAATCGGTTCTGAAGGACGTAACTTTCAGTTCGCCAGTCACATGGTGATGTTTGACCTGCCATTCAACCC GGATCTACTGGAGCAGCGTATTGGTCGTCTGGATCGTATCGGCCAGGCGCACGATATTCAGATCCATGTGCCTTATCTGG AGAAAACCGCTCAGTCGGTGCTGGTGCGCTGGTATCACGAAGGTCTGGATGCATTTGAGCACACCTGCCCGACCGGACGC ACTATTTACGATAGCGTATACAACGATCTGATTAACTATCTGGCTTCACCGGATCAAACCGAAGGCTTTGACGATCTGAT CAAAAGCTGCCGCGAGCAACATGAAGCGCTGAAAGCACAGCTGGAACAGGGTCGTGACCGCCTGCTGGAAATCCACTCCA ACGGTGGCGAAAAAGCCCAGGCACTGGCAGAAAGCATTGAAGAGCAGGATGACGATACCAACCTGATCGCCTTCGCCATG AACCTGTTCGATATTATCGGTATCAATCAGGACGATCGCGGCGACAACATGATCGTGCTGACGCCGTCCGATCATATGCT GGTGCCGGACTTCCCTGGCCTGTCGGAAGATGGCATCACCATCACCTTTGATCGTGAAGTGGCGCTGGCGCGTGAAGATG CACAGTTTATTACCTGGGAGCATCCGCTGATCCGCAACGGTCTGGATCTGATCCTTTCTGGCGATACCGGTAGCAGCACG ATTTCACTGTTAAAAAACAAAGCGTTGCCGGTAGGTACGCTGTTGGTGGAACTGATTTATGTGGTTGAAGCCCAGGCTCC GAAGCAGTTGCAGCTCAACCGCTTCCTGCCACCGACGCCGGTACGTATGCTGCTGGATAAAAACGGCAACAACCTGGCGG CGCAGGTAGAGTTTGAAACCTTTAACCGCCAGCTTAACGCGGTTAACCGTCACACCGGCAGCAAACTGGTTAACGCCGTG CAGCAGGATGTTCACGCTATCCTTCAACTGGGTGAAGCGCAGATCGAGAAATCTGCCCGTGCATTGATTGATGCAGCGCG TAACGAAGCCGACGAAAAACTGTCTGCCGAGCTGTCTCGTCTGGAAGCTCTGCGTGCAGTGAACCCGAACATTCGTGACG ACGAACTGACCGCCATTGAGAGCAACCGTCAGCAGGTAATGGAAAGCCTGGATCAGGCAGGTTGGCGTCTGGATGCCCTG CGTTTGATCGTTGTAACGCATCAGTAA
Upstream 100 bases:
>100_bases TAGCGCCCTTTCCATTCTTGGACCTGAATAACACCACTACCTCATAAGCACGGTAGCGGGTGGTTATTGCCTGCAATTAA AGATATAGAGCCGAACACAT
Downstream 100 bases:
>100_bases CGGAGCCGAAAATGGGGATGGAAAACTACAATCCACCGCAGGAACCCTGGTTGGTTATCCTGTATCAGGATGACCATATT ATGGTGGTCAACAAGCCGAG
Product: ATP-dependent helicase HepA
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>968_residues MPFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDTITSHDGWQMQVEEVKEENGL LTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLN IAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQH DAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLG MESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSAR QELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGD NATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVL LCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGR TIYDSVYNDLINYLASPDQTEGFDDLIKSCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAM NLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQFITWEHPLIRNGLDLILSGDTGSST ISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTPVRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAV QQDVHAILQLGEAQIEKSARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQAGWRLDAL RLIVVTHQ
Sequences:
NA
Specific function: NA
COG id: COG0553
COG function: function code KL; Superfamily II DNA/RNA helicases, SNF2 family
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA