| Definition | Clostridium perfringens ATCC 13124, complete genome. |
|---|---|
| Accession | NC_008261 |
| Length | 3,256,683 |
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Identifier: 110800752
GI number:
Start: 2112253
End: 2115507
Strand: Reverse
Name: Not Available
Synonym: CPF_1878
Alternate gene names: NA
Gene position: NA
Preceding gene: 110800760
Following gene: 110799821
Centisome position: NA
GC content: NA
Gene sequence:
>3255_bases ATGTTAGTTGAAGATTTATTGTTACAAAGGTTTAAAGAAGAAACTACAGGAAGAAATTATGCTAAGGGACAAAGAATAAT AAATAACGATCTTGTGGAGTCAGTAGAAATAGAAGACGAGGAAGATTTAGTAGCTGTTAATGGAATAGTAATTTCAGAAC AATTATTTAGTAAATATAGTACGAAATTAGAGATAGATATTAGAAGTAGGGGGATTTTATCAACATATTGTACCTGTACT GATTATGAAAAACATGAGTTTAGTAAGGAAAATTATTGTTGTAAGCATTTAGTAGCAACTTTTTATAAAGCTTTAGAGGA TTTAGCTAAGAAAAAAGAGTTTAAAGAGGATAAAAACTTATTTTCTAAGAAGAAAGAAAATAAAATTTTAGATTTAATTC TTCAAGAGGAAACAGATAAAGAAGAGTTAAAAATAGAGGTTTATATAAATAAAAATGAGTGGAGTAATAGCATATTAGCA GAGTTTAAAATAGGAACTAAGTCCATGAGTTCAAATAAACTTTATATATTAAAGGATATTGAACAATTTTTAGTAGCTTA CTATAATAGAATACCTATTAAATATAGTAAGGTTTTTACTTTTGATATAAGGGAACAAAAGTTAAGTACTAAGGATAGGG AGTTAATAGAGTTTATAGAAAGCTTAAAAGAGATAGAAAAGCCAATAAAAAGCTTCTTAAGAAATAGAGATACATTTATA GAGGGTAAAAGCATAAAGATACCTAATTATTTAGTAAGAGATTTTTTTCGTGTTATAAAAAATCATAGAATTTATTTAAA TGAAGGATTTTTTTATAGAGCAGTAGAAAGTGAAGTGCTTTTTGAAGATGTTCCAATAGATTTTTCTCTAAAGGATTCAA AAAATAATTTTGAACTGAGCTCCTTAAACGGAATGCCTAAGGTTTTAGGGGATAGAGCTGATGTATTCTTATATGGAACT AATATATATATTCCTAAAAAAGATTTTTGTTATAAAATAAAGAATTACTTAGATATATTTTCTGAAGGAAAGGTCATAAA GATTGATAAATGTGAAGAGGAAAGAGTATTTAGAAAGCTAATACCTTCCTTAAGAGATTTAACTGAGAATGTAGTTCTTT CTAAAAATATAATGAATAAGACGGTTTTAGAGCCTGTAAAATTTAATTTTTACTTTGATAAAGAGGGGAAAGAAGTAACT TTAACCTTAAAAGTAAAATATGGTTCTTATGAATTTAATATATTTGATGATTGTAAGGAAAAAATAATATATAGAGATAT AAAAAAAGAAAAAGAATTAATTGCCTTAATTGAGAGATTTAGCCTTGAAGAGATAAATAAAAAGTTTTATTTCTATTTAG GAGATGAATATATATTTAGCTTTTTTAAGTATGATGTATGCAAATTACAAGAGTATGGAGAAGTATATTATTCAGAAAAC TTTAAAGGTATAAAAAGCTTAGGAAGCAAGGGGATAAAGGGAGACATTAAACCAGGAAGATATAATTATTTTGAGTTTGA CTTTAAAATAGGAGATATACCTAGTGAGGAAACAAGAGAAATACTTAGAGCTTTTAGGGAAAATTTAAAGTTTTTTAAAC TTAAAAGTGGAGAATTTCTTGATTTAGAAGAACTAGAATTAAAGCAATTTTTAAAGTTATTAGATTCAGTGGATAATGGA GATTTAGAGAAAAATTGCCTAGAAATAAATAATAGTAGGGCATTATATATAGCTAATTACATAGAAGAGAAGGGGATTAG ATATATTAAGGGGAAAAAGAAGTTAAATGAATTGAAAAGTAAATTTAAAAATATAAATAAACTGTCCTTTGAAGTTCCTA AGGATCTTAAGGCTAATCTTAGAGAGTACCAAAAGTTTGGATACAATTGGCTTAAAACTTTAGAGCATTTAGGCTTAGGG GGAATTCTTGGAGATGAAATGGGTCTTGGAAAAACTCTTCAAGCAATTACCTTTATTCTTTCTAATAAGGGAAAGAAAAC ACTAGTAGTAGCACCAACTTCCTTAATATATAACTGGAAAGAAGAATTCAATAAATTTGCACCTAATTTAGTTGTGGAGG TATTAAATGAAGGCAAGGATAAGAGAGAAGAAGCTTTAAGAGATATAGAGAGTAAGGATGTAATTATAACTACCTATAAC TTATTAAAAAGAGATTTAGAGGAATATAAGAAGATAAACTTTGATTATTGCTTTATTGATGAAGCGCAAGCTATTAAGAA CCCAGATTCTCAAAATTCTGAAGCTGTTAAAGAGGTTAATTCAGAATATAAATTTGCTTTAACTGGTACCCCTATGGAAA ATTCTCTTATGGAACTTTGGTCTATTTTTGATTTTGTAATGCCAGGATATCTTTATGATAGAAAAAGATTCACTGTTAGA TATTATAAAAAATTAAATGAAAGTGAAGAAGTGTTAAATGAAATACATAGCCTTATAAAACCTTTCATACTAAGAAGAAA GAAAAAAGATGTTATAAAAGAATTACCTGATAAGATTGAAAAGATGCACTTAGTTGATTTAGGGGAAGATCAGAAAAAGG TATATTCAATATATGCTAATAATGCCTTATCAATTATGGAAAAGAAACAGGATGCAGAGGAGTTTAATAAGAGTAAAATA GAAATATTATCTTATATAACTAAACTTAGACAATTAGCCTTAGACCCTGCTGTAACAATAAATGATTATATGGGGGAAAG TGCAAAAATAGAGGCTTTAGTTGAAATATTAAATCAAGGAATAGAAGAAGGACATAAAATCCTTGTGTTTTCACAGTTTA CTTCAGTATTAAAAAATATAAGTAGTAGACTTAAGGAAGAAAAAATTTCTTTTAGTTACTTAGATGGAAGTGTTTCATCT AAGAAAAGAATAAATATGGTTAATGAATTTAATGAAGGTGAAAACTCAGTATTTTTAATAAGCTTAAAAGCTGGGGGAAC AGGACTTAACTTAACTTCAGCAGATATTGTAATTCATTTTGATCCTTGGTGGAATCCAGCAGTAGAAAATCAGGCAACGG ATAGAGCACATAGAATGGGACAAAAAAATGTAGTAGAGGTTATAAAATTAATAGCTAAAGGAACTATTGAGGAAAAGGTA GTAGCTCTTCAAGAGGAGAAGAAGGAATTGATTTCTAAGATTATTGAAGAGGGAGAATTAGGAGCAGGAAGTACATTTAA TACCTTAAGTGAAGAAGAGTTGATGGATTTATTTAAAGTAGATTATTTAGGTTAA
Upstream 100 bases:
>100_bases AAAATAAGTTTTGTAAAAAGTAAAGTTAACATAGTTTTTCAGAGAAAATAAATTTATGTTATAATTATAAGATATGAAGC ACTTAAATAGAGGAGTAAAT
Downstream 100 bases:
>100_bases TAATAAACTATAAGATAATAAATTTAGGTGATTTAAGAAACGCTGAGCTTTAGTATATAGTTAATAATGAGCCCTATAAA TAATTTAAAATAATAAAGTT
Product: Snf2/Rad54 family helicase
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>1084_residues MLVEDLLLQRFKEETTGRNYAKGQRIINNDLVESVEIEDEEDLVAVNGIVISEQLFSKYSTKLEIDIRSRGILSTYCTCT DYEKHEFSKENYCCKHLVATFYKALEDLAKKKEFKEDKNLFSKKKENKILDLILQEETDKEELKIEVYINKNEWSNSILA EFKIGTKSMSSNKLYILKDIEQFLVAYYNRIPIKYSKVFTFDIREQKLSTKDRELIEFIESLKEIEKPIKSFLRNRDTFI EGKSIKIPNYLVRDFFRVIKNHRIYLNEGFFYRAVESEVLFEDVPIDFSLKDSKNNFELSSLNGMPKVLGDRADVFLYGT NIYIPKKDFCYKIKNYLDIFSEGKVIKIDKCEEERVFRKLIPSLRDLTENVVLSKNIMNKTVLEPVKFNFYFDKEGKEVT LTLKVKYGSYEFNIFDDCKEKIIYRDIKKEKELIALIERFSLEEINKKFYFYLGDEYIFSFFKYDVCKLQEYGEVYYSEN FKGIKSLGSKGIKGDIKPGRYNYFEFDFKIGDIPSEETREILRAFRENLKFFKLKSGEFLDLEELELKQFLKLLDSVDNG DLEKNCLEINNSRALYIANYIEEKGIRYIKGKKKLNELKSKFKNINKLSFEVPKDLKANLREYQKFGYNWLKTLEHLGLG GILGDEMGLGKTLQAITFILSNKGKKTLVVAPTSLIYNWKEEFNKFAPNLVVEVLNEGKDKREEALRDIESKDVIITTYN LLKRDLEEYKKINFDYCFIDEAQAIKNPDSQNSEAVKEVNSEYKFALTGTPMENSLMELWSIFDFVMPGYLYDRKRFTVR YYKKLNESEEVLNEIHSLIKPFILRRKKKDVIKELPDKIEKMHLVDLGEDQKKVYSIYANNALSIMEKKQDAEEFNKSKI EILSYITKLRQLALDPAVTINDYMGESAKIEALVEILNQGIEEGHKILVFSQFTSVLKNISSRLKEEKISFSYLDGSVSS KKRINMVNEFNEGENSVFLISLKAGGTGLNLTSADIVIHFDPWWNPAVENQATDRAHRMGQKNVVEVIKLIAKGTIEEKV VALQEEKKELISKIIEEGELGAGSTFNTLSEEELMDLFKVDYLG
Sequences:
NA
Specific function: NA
COG id: COG0553
COG function: function code KL; Superfamily II DNA/RNA helicases, SNF2 family
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA