Definition Clostridium perfringens ATCC 13124, complete genome.
Accession NC_008261
Length 3,256,683

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Identifier: 110800747

GI number:

Start: 1795557

End: 1798811

Strand: Reverse

Name: Not Available

Synonym: CPF_1576

Alternate gene names: NA

Gene position: NA

Preceding gene: 110799182

Following gene: 110798753

Centisome position: NA

GC content: NA

Gene sequence:

>3255_bases
ATGGGTGCTAATGTAAAAATAGGAGCAAATACATCTGACTTTCAAAAGCAAATGAAGGATATGGTAAGAGAGCTTAAATC
TCTTGGCAGTACATTTAATTTAGCAAGTACTCAGGCTAAATTATTTGGTAATGCTAATGAACAATTAAAAGTAAAACAGG
CTGAGCTTACTGAAAAAATGAAACTTCAAAATAGAATGATTAATTTACAAAAAGAAGCAATTAATAAGTTGACTAATGAT
GTTCAGAAGCAAAAAGAAAAAAGAGAAGAATTATCTAAAAAAATAGAAGAAGTAACTAAAAAATATAAAGAAAGTTCTGA
AGCTACTGGAAAGAATAGCGAGGAAACAAAAAAGTTAGGAAAATCTTTAGCTGATTTAAAAGAAGAATATGCTAGGAATG
AAAGAGCAATAGATTCATCTAATAGAAAAATAGATACTGCAAATATGAAAATGAATAAATCTAAGACAGAGCTATTAGAA
AATAAAAAAGCTTTAGAAGAGGTTGATAAGAAATTAAAAGATATCAATTTAGATAAATTCTCTCAAAAAATGGACAAGGT
AAGCAATGCTACAGGGAAGGCAGCTAGTGCTTTAAAACCAGCAGCAATAGCTGTTACTGGATTTGGTGTTGCTGCTGCAG
TGACAGAAATGAAGTTTCAGGATGGTATAGCAAATATAAATACTCTTTTAGATGACCAAAGTCATTTAGAAGGATATAAA
AATAAAATAATGGAAGTATCAAACCAAACAGGAATTGATTTGAAGATTGTAACAGATGGTATGTATCAGGCTATTTCATC
AATTGGAGATGGAGGAGCAGAAACAGAGAAGATATTTGATACTATGGCTAAAAGTGCTAAGGCTGGTGGAGCAGAGGTTA
AAGATGCAGTTGCTTTAATTAGTGCAGGAATGAAAGGATATAATCAAGTTAATGATGAAACAGCAAAGAAGATAAGTGAT
TTAGCCTTCCAAACAGCTAAGTTGGGAGTAACAACTTTTCCAGAAATGGCTTCAAGCATGCAACCATTATTCCCACTAGC
AAGCAATTTAAATTTATCAATGACAGATTTATTTACTAATATGGCTACATTAACAGGGGTTACAGGAAACACTTCAGAAG
TATGTACCCAGTTAAAAGCAGTATTTAGTAACTTAATTAAACCAACAGCAGATATGCAAAAATTAATGGAGAAATATGGC
TTCCAAAATGGTCAAGCAATGTTAAAAAGTGAGGGCTTAATTGGTACTTTAAAAATATTACAAAAAGAAACTGGTGGACA
ATCAGATAAAATGGGAAAACTTTTTAGTAGTACTGAAGGACTAACAGCAATTACAGCATTAACAAGTTCACAGTTTGATA
CGTTGGCAGATAAGTCTAAGAAAATGAATGAGGCTATAGGAACAACTGATTCAGCTCTTGCAAAAATAAATAATACTACT
GGAAATGATTTAAGAACATCTTTAAACTTAGCTAAAAATAGTCTAGTTGGATTTGGTGAAGTATTAGCACCATTTATTTC
TTTAGCTGCTAAGGGAATAGGTGGTATAGCTAAAGCTTTTGGTGGATTAAGTGAAGGGCAAAAAAAGGCAGTAGTGGGAA
TAGGAGCTTTTGTAGTTGGTTCTTATGGAGCTTTAGCAGTAACAACTAAAGTTACAGGAACAATAAGAAATGCCATTAAA
GATTATAAAGCATTTAGAGATGTTATGGAAAAATTAAAAATTGCTACAAAGTTACAAACAGCAGCACAGAAAGCTTTAAA
TTTTGTTACTGAAATATCTCCAGTAGGAAAAATTATATTAGTCGTTGGATTAGTAGTAGGAGCTTTAACTTATTTATATA
ATCATTGCGAGTGGTTTAGAAATGGAGTTAATAAAATATTTAGTGGACTTATAAAGTTTTTTACAGAAACAGTACCTAAT
AAATTAAAGCAGTTAATAAATTTCTTTAAAAATGATTGGAAGGAAATTTTGTTGCTTATAGTTAATCCTTTTGCTGGAGC
TTTTGCATTAGCTTACAAGCATTGTGAAGGATTTAGGAATGGAGTGGACAAATTATTTTCAAATATTAAAGAGTTTTTTA
CTAAAAGTATTCCTGATTTCTTTAAGTGGTTAATATCTAAACTTACACAATTTAAAACAGACTTCATAAATAAAATAAAA
GAGTTTGGTACTATAATAAAAACTAGAATAAAAAATTATATAGAAGAAGTAAAATTTATATTTAGTAATTTACCTAAACT
TATGGGGATATTGATAGGAAAAATTGCAGGAGAAATTTATAAGGGATTTTTAAACATAAAAATATTTATCACTAAAACTA
TTCCAGATGCAATAAATTCTATAAAGCAATGGTTTGCACAGCTTCCTGAAGCAATAGGGAAACAATTACTTGATTCATAT
ATGAAAGTAAAGACATGGGGAAATAATTTATATATTTCAGCAAAAAAGACAGGTAAGGATTTTATATATGGAGTGATAGA
TTATGTTAAGGAACTACCACATAAAATTTGGAATAAGATTACTGAAGCTTATGATGGAGTTACTACATGGGGAAATAATA
TGTACCAAGAAGCTAAGAAAGTGGGAAAGGAATTTGTTGATTCTATAGTAGATCATGTTAAAGAACTACCAACAAGATTT
AAAAATTGGTTAAAAGAATCTTGGAATAAGGTAAGTGCATGGGGAGAAGATTTAAAGACTGCTGGTAAAGAGAGTGGTAA
AAAGTTAGTTGATTCTATAGTAGATACAGTAAAAGCTATACCAGGACAAATGAAAGAGATAGGTAAAAATATAGTTCATG
GGATTTGGGATGGTATAACAGGTGCTATTGGATGGATAAAAAGTAAGATAAAACAATTTTGTGATGGAATTGTAGAAGGA
TTTAAAAGTTCTTTAGATATACATTCTCCATCTAGGGTGTTAAGAGATCAGGTTGGTAAATTTATGGCTCAAGGTGTTGG
AGTAGGTTTTGTCAATGAAATGGAAGATATAAATTTAGATATAAAGCAAAGTTTGGATAGAACTATAAATACTAATATAG
TACCTTCTATATCAAATGTTGACTTAGAAAAAATAAATACAAAACTTAATAATACAAACAATAATAATATAGTAGTTGTA
ATTGAAAATGTAACTAATTTAGATGGTGAAGTAATCAGTACTAAAGTATATAAGAAAGTAGCTAAACAAATGAAAAGTGA
TGAAAATAGTTATAGAGTTACTAAAGGAAAGAAGGGAGGTCGAATATGTGCATAA

Upstream 100 bases:

>100_bases
ATTATATAAATTCAGAATTTGAATATTTAGAAGAGAATAAAGACAAGGATTATACAGATGTATAGTCCTTTTTATTTTGT
TGAAGAAAGGAGGTTGATTA

Downstream 100 bases:

>100_bases
ATATTTTATTTGGTTCAATAATTGCACAGATTTAGAAATAGGAATTAAGGCAATAAAAAGACCATTCTTCCCTTCACTAA
AAAAGAGATATAGAGAACAA

Product: TP901 family phage tail tape measure protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1084_residues
MGANVKIGANTSDFQKQMKDMVRELKSLGSTFNLASTQAKLFGNANEQLKVKQAELTEKMKLQNRMINLQKEAINKLTND
VQKQKEKREELSKKIEEVTKKYKESSEATGKNSEETKKLGKSLADLKEEYARNERAIDSSNRKIDTANMKMNKSKTELLE
NKKALEEVDKKLKDINLDKFSQKMDKVSNATGKAASALKPAAIAVTGFGVAAAVTEMKFQDGIANINTLLDDQSHLEGYK
NKIMEVSNQTGIDLKIVTDGMYQAISSIGDGGAETEKIFDTMAKSAKAGGAEVKDAVALISAGMKGYNQVNDETAKKISD
LAFQTAKLGVTTFPEMASSMQPLFPLASNLNLSMTDLFTNMATLTGVTGNTSEVCTQLKAVFSNLIKPTADMQKLMEKYG
FQNGQAMLKSEGLIGTLKILQKETGGQSDKMGKLFSSTEGLTAITALTSSQFDTLADKSKKMNEAIGTTDSALAKINNTT
GNDLRTSLNLAKNSLVGFGEVLAPFISLAAKGIGGIAKAFGGLSEGQKKAVVGIGAFVVGSYGALAVTTKVTGTIRNAIK
DYKAFRDVMEKLKIATKLQTAAQKALNFVTEISPVGKIILVVGLVVGALTYLYNHCEWFRNGVNKIFSGLIKFFTETVPN
KLKQLINFFKNDWKEILLLIVNPFAGAFALAYKHCEGFRNGVDKLFSNIKEFFTKSIPDFFKWLISKLTQFKTDFINKIK
EFGTIIKTRIKNYIEEVKFIFSNLPKLMGILIGKIAGEIYKGFLNIKIFITKTIPDAINSIKQWFAQLPEAIGKQLLDSY
MKVKTWGNNLYISAKKTGKDFIYGVIDYVKELPHKIWNKITEAYDGVTTWGNNMYQEAKKVGKEFVDSIVDHVKELPTRF
KNWLKESWNKVSAWGEDLKTAGKESGKKLVDSIVDTVKAIPGQMKEIGKNIVHGIWDGITGAIGWIKSKIKQFCDGIVEG
FKSSLDIHSPSRVLRDQVGKFMAQGVGVGFVNEMEDINLDIKQSLDRTINTNIVPSISNVDLEKINTKLNNTNNNNIVVV
IENVTNLDGEVISTKVYKKVAKQMKSDENSYRVTKGKKGGRICA

Sequences:
NA

Specific function: NA

COG id: COG5283

COG function: function code S; Phage-related tail protein

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA