| Definition | Clostridium perfringens ATCC 13124, complete genome. |
|---|---|
| Accession | NC_008261 |
| Length | 3,256,683 |
Click here to switch to the map view.
The map label for this gene is Not Available
Identifier: 110799664
GI number:
Start: 1823380
End: 1827795
Strand: Reverse
Name: Not Available
Synonym: CPF_1614
Alternate gene names: NA
Gene position: NA
Preceding gene: 110799276
Following gene: 110799559
Centisome position: NA
GC content: NA
Gene sequence:
>4416_bases ATGAAAAGGTTAATAGCTTGTGGAATAGCAGCAAGTATAGTTTCAGTTAATGGATTATCTGTTCTTGCTTCTGAGTTAAA TAAGTCAGATAAAGTTAATTTAGCTTTAAACAAAAAAACTGTTGCCTCTTCAAGAGAAGTTAATGACAAATGGGGTGCAG AATTAATAACTGATGGTATTAAGGATAAGCCAAGTGATCCAAATGCTAAGCCAGGAAATTCTAGGTGGGCTAGTTCAAGA AGTGTACCACAATGGATATACATTGATTTTGAAGAAGCAACAACCTTTGATCAAGTTGATATACTTTGGGATGGTGCATA TTCAAGAAATTATAAATTAGAGGTTTCTAATGATGGGGAAACTTGGGAAGAAGTTTACGCAACTAGTGAGGGGAAAGGAA ATCAAGAGTCTATAAATCTTGGAGAAGATATAACTGCTAATTATTTAAGAGTTAGTTGTGAAGATACAGCTCATGAATGG GGAAATGTATCAATATATGAAGTTGAGGTTTATGATAACGAAAATGAGGAAAATGTAACTCCTCCAGAAACAGAGATAGG AGTTAATATTGCTTTAAATAAAACTGCTACGGCATCAGCATCAGAAACTAATACACTTACTCCAGACAAAGTTGTAGATG GAGATACATCTTCAAGAAATTCAAGATGGTCAAGTGGAGGATTTTCTAATGGTGCTAAACAGTGGATAACTATTGACCTA GAAAAGGAAAGCACTTTTGACAAGGTTAGATTATTCTGGGAAGCTGCCAACGCTAAGGTCTATGAAATCCAAACTTCTAA TGATAATGAAAATTGGAAAACAGTTCATAGAAACGAAGCTGGAAAAGGTGGCACTGAGGTTATAGAATTAAGTGAAAAAG AAAATGCAAGGTATGTAAGAGTTTATTGTGAAGAAAATAATCCAGCAGTATGGAATGCAGTATCTTTATATGAAGTAGAG ATATATAATGGAGAGATTCCTTCATCTGGTGATTTAGATGAAGTTTTAAACTCATTAGAAGTTCCTACTATAAATAAGGG GGACTCTAAACTTCAAATGCCAGAGGTTCCAAAAGGGTTTGAGATAAAATTTATTGGGGCAGATTATAATCAAATAATAA ATGATGATATGACCATAAATGAACCTTTAGTAGATACAAAGGTAGTTGTGGATTTTGAAATAAAAAAAGGCAGTCTAAAA AGAGAAACTACTGGTATTGAAATAACTGTACCTGGTAAATATTCTGGTTCTTTAGGAAGTAATACTAAGCCAGAAGTAGT TCCAAGTTTAAGAGAATGGGTTGGAAAAGATGGAAACTTTACTATAAGAGATTCTTCAAGAATAGTTATTGATCCTACCT ATGAAAATGAACTAAGCAAAACTGCAAGTGAATTTAAATCTGATTATGAGGAGATAGTTGGTAAACCAATGGAAATAGTT TACTCAAGTTCACCTGTAGAAGGAGATTTTTATTTTACTTTAAATTGTGAAGATAAGAGTATTGGAGAAGAAGGATATTA CATGTATGTAGATGAGTATGTAAAGGTTGAAGCTACTCATAATACAGGAGCTTTCTACTCAACTAGATCAATACTTCAAA TATTAAAGCAAAATGGAGAAACTATTCAGAAAGGAATAGTTAGAGATTTCCCAAGATATGAAAATAGAGGATTTATGCTT GATGCAGGAAGAAAATTCTTTACAATGGATTATTTAGAGCAGTTTATGGAAGTTATGTCTTGGTACAAATTAAATAACTT CCAAGTTCATTTAAGTGATAACTATATTTGGACTAATAATGAGAATTGGGAAACTGCTTATGCTGCTTTTAGATTAGAAT CTGACACATATCCAGGTTTAACAGCAACAGATGGAAGTTATACTAAAGAAGAGTTTAGAGAATTTATAGAAAAGTCTGGG GATCATGGAGTAGAAATTATTCCAGAAATAGATGTTCCTGCTCACTCCTTAGCATTTACTCGCTATGATCAATCTTTAGC CTTAGGTACAGGAGGAGATGCAACTTATTTAGATGTAGGTAATCCAAAGGTTTATGATTTTGTAGATGGATTATTTGATG AATATTTAGGAGGAGAAAATCCAGTCTTTGGAGATCAAGATTTCCATATTGGAACAGATGAGTATAAGGGAGCACCAGAG AAAAAAGAAGAATTTAGAGCATTTACAGATAGATATCTTAAAAAAGTAAGAGATGATTATGGTAGAAATCCAAGACTATG GGGAAGTTTAGATGTTTTCCCAGGACAAACTCCTGTAACTAGCGATGGAGTCCTTATGAATATATGGTATAGGGGATATG CTGATGCTAGAAATATGATAAATCAAGGATATGATATTTTAAATACACAGGATGCAGATCTTTATATAGTTCCAGAAGCA GGTTACTATAATAACTATCTTAACACAAGATTTTTATATAATGAGTGGGAACCAAGAAGATTTGCTTCAGATTACAAACT TCCAGCGGGACATCCTCAATTAAAGGGAGGAATGTTTGCTGTATGGAATGATATGATAGATGAAAAAGCAAATGGAATTT CTGAAAGAGACATCTATGATAGATCATTCCAAGCTGCTCAAGTTTTATCAGAAAAAATGTGGGCGGCACCTGATAGTGAA ACAAGTTTTGAAGAATTTAAAGAAAGAGTTGACAAAGTAAGTGATGTTCCAGATTCTAACTTAACTTATGATGTGGAATC TAAAACTGAAACTGTAATTGATTATGATTTTGAAGAAGATTCTACAGAAAATATTAAAGATAATTCTGGAAATGAATATA ATGCTACAGGAGTAAATGTAGAATCTGTAGAAGGTAAAGAAGGAAAAGGAATTAAATTAAGTGGAGGAGAAAGCTATATT GATACTCCAATTGATAACAAAGGTTTAGACTATACGGTTTCTATGTGGGTGAAGAAAGATGCAAATGGAGATTATAGTGA GCAAATATTATCAGAATCTAACACAGGGGTATTAAAGGCTTGTCAAAAAGAAACTGGTAATGTTGGTTTCTCAAGAGAAG GATATGACTATTCATTTAATTATAAATTACCTGAGGATGAATGGGTAGAGTTAACATTTATTGGAGAATTAAATAAAACA AGTCTTTATGTAAATGGAGAATTTATAGAAACTATAAATAAGAGTAATGGTGGTAAGGTAGGAACATTTATTTTACCTTT AGATAAAATAGGAAGTTCAACTAATTCCTTTAAGGGTAGCATAGATGAAATTACTATTAAGGATGGGGCTCATAAAATTG TAGATCCTACAGTTATACCTCAAGAGCAAATGAGTGCAACTGCTAGCAGTGAGCATCCTAATATAGGATCAGAGGGAATA GCTGATTTTGCTATAGATGGAGATGAAAGTACTATATGGCATACTAAGTGGAGTCCTGTAGAAGCATTACCTCAACACAT TACTTTAGACTTAGGTGGAAGTTATAATATAAATAAATTTACTCATATGCCAAGACAGGATGCCTTAAATGGTAGCATAA GTAAATATGAATTCCAAGTTAGTACTGATGGAGAAAACTTTACAAAGGTTTTAGAGGGAGATTGGACTGCTGACCATAGT ACTAAGGTATTAAAATTTGATCCAGTAGAAGCTACTCATGTAAGATTAGTGGCTAAAGCTGGTCATGGTGGATTTGCCTC AGCTGCTGAATTAAATGTTCATCAAGTTTTAGAAGTTCCACAAGAGAATGTGGGACAAAGTTTCTTAACTTTACCAGAAA GCCTTAAAGTAAATGAAAATTTTGATGTTTTCTTAGGTGCTAACGAAATAAAAGAAGATTTATCAGCTTATGCAGCAGAA TTTACTTTAAAATATAATCAAGAAGTATTTGACTTAGTTGAAGTTGCAAGTGGAATAGATGGAGTTTTGGTAAATTATAA AGAAGTAGAACCAGGCGTAGTAAAAATATTAGTTGCTAGTTTAGAAAAAACTATAGAAAATGATACAAACTTAGTAAAGG TAACTCTTACTCCTAAGAGTGAATCAGAAAGAGAAATTTTTGAAGTAATTTCAGCAAACTTAGGTGATGGAGAAAATGGA AAAGTTTGTGAATTAGGATTAACAAGTGGAGAGGTAGCAGTAGGCAAAGGTAGTGTAGATATAATTGTTAACCCAGTAGA AAACTTTGTGGCTTCAGAGATTAGTAGAAAATATGTAAATGTAACTTGGGAAGCTCCAAAGACAACTGAAGGTTTAGAAG GATATATTTTATATAAAGATGGTAAAAAGGTTGGAGAAGTTGGTGCTGATGAGACAACTTATAAATTTAAAGGCTTAAAT AGACACACAATTTACAACTTTAAAATAGCTGCTAAGTATTCAAATGGAGAAATTTCTAGTAAGAAGTCAATAACTTTAAG AACAAGCAGAAATTAG
Upstream 100 bases:
>100_bases ATTAAAAATTATTCATATATATTTAATGTATTGAATAAATATGGTACTTAGAATAGTGTGAAAATTTGGGGGTGGAATTT TGTTAAAGAATAGAGAGAGG
Downstream 100 bases:
>100_bases AGAAATAAAAAAATAAGAAAAAGACCAGAATCCTTGATTTTGGTCTTTTTTTATAATAAATATTATTTTGCTATATAATA TAATTAGTTATAGAAAGAGA
Product: glycosy hydrolase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>1471_residues MKRLIACGIAASIVSVNGLSVLASELNKSDKVNLALNKKTVASSREVNDKWGAELITDGIKDKPSDPNAKPGNSRWASSR SVPQWIYIDFEEATTFDQVDILWDGAYSRNYKLEVSNDGETWEEVYATSEGKGNQESINLGEDITANYLRVSCEDTAHEW GNVSIYEVEVYDNENEENVTPPETEIGVNIALNKTATASASETNTLTPDKVVDGDTSSRNSRWSSGGFSNGAKQWITIDL EKESTFDKVRLFWEAANAKVYEIQTSNDNENWKTVHRNEAGKGGTEVIELSEKENARYVRVYCEENNPAVWNAVSLYEVE IYNGEIPSSGDLDEVLNSLEVPTINKGDSKLQMPEVPKGFEIKFIGADYNQIINDDMTINEPLVDTKVVVDFEIKKGSLK RETTGIEITVPGKYSGSLGSNTKPEVVPSLREWVGKDGNFTIRDSSRIVIDPTYENELSKTASEFKSDYEEIVGKPMEIV YSSSPVEGDFYFTLNCEDKSIGEEGYYMYVDEYVKVEATHNTGAFYSTRSILQILKQNGETIQKGIVRDFPRYENRGFML DAGRKFFTMDYLEQFMEVMSWYKLNNFQVHLSDNYIWTNNENWETAYAAFRLESDTYPGLTATDGSYTKEEFREFIEKSG DHGVEIIPEIDVPAHSLAFTRYDQSLALGTGGDATYLDVGNPKVYDFVDGLFDEYLGGENPVFGDQDFHIGTDEYKGAPE KKEEFRAFTDRYLKKVRDDYGRNPRLWGSLDVFPGQTPVTSDGVLMNIWYRGYADARNMINQGYDILNTQDADLYIVPEA GYYNNYLNTRFLYNEWEPRRFASDYKLPAGHPQLKGGMFAVWNDMIDEKANGISERDIYDRSFQAAQVLSEKMWAAPDSE TSFEEFKERVDKVSDVPDSNLTYDVESKTETVIDYDFEEDSTENIKDNSGNEYNATGVNVESVEGKEGKGIKLSGGESYI DTPIDNKGLDYTVSMWVKKDANGDYSEQILSESNTGVLKACQKETGNVGFSREGYDYSFNYKLPEDEWVELTFIGELNKT SLYVNGEFIETINKSNGGKVGTFILPLDKIGSSTNSFKGSIDEITIKDGAHKIVDPTVIPQEQMSATASSEHPNIGSEGI ADFAIDGDESTIWHTKWSPVEALPQHITLDLGGSYNINKFTHMPRQDALNGSISKYEFQVSTDGENFTKVLEGDWTADHS TKVLKFDPVEATHVRLVAKAGHGGFASAAELNVHQVLEVPQENVGQSFLTLPESLKVNENFDVFLGANEIKEDLSAYAAE FTLKYNQEVFDLVEVASGIDGVLVNYKEVEPGVVKILVASLEKTIENDTNLVKVTLTPKSESEREIFEVISANLGDGENG KVCELGLTSGEVAVGKGSVDIIVNPVENFVASEISRKYVNVTWEAPKTTEGLEGYILYKDGKKVGEVGADETTYKFKGLN RHTIYNFKIAAKYSNGEISSKKSITLRTSRN
Sequences:
NA
Specific function: NA
COG id: COG3525
COG function: function code G; N-acetyl-beta-hexosaminidase
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA