Definition Clostridium perfringens ATCC 13124, complete genome.
Accession NC_008261
Length 3,256,683

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The map label for this gene is pnpA

Identifier: 110799658

GI number:

Start: 2171507

End: 2173615

Strand: Reverse

Name: pnpA

Synonym: CPF_1934

Alternate gene names: NA

Gene position: NA

Preceding gene: 110799206

Following gene: 110801345

Centisome position: NA

GC content: NA

Gene sequence:

>2109_bases
ATGAATCATACCCATGAAACTATCATAGCAGGAAGACCGATGAAAGTTGAGTTCGGGAAATTAGGAATGCTTTCAGATGC
TGCTATATTAATGAGTTATGGTGATACAGTAATATTAACAAATGTAAATGCATCAGAAAAACCAAGAGAGGGAATAGACT
TTTTCCCACTAAGTGTTGAATACGAAGAGAGATTATATTCAGTTGGTAAAATACCAGGTGGATTTATAAAAAGAGAAGGA
AAACCTTCAGAGAAAGCTATACTAAATGGTAGAGCTATAGACAGACCTTTAAGACCTTTATTCCCAAAAGGATATAGAAA
TGATGTTCAAGTAGTATGTACAGTTGTTTCAGTAGAAAATGATAACCTTCCTGAAATACTAGCTATAAATGCTGCCTCAA
TGGCATTATGTTTATCAAGCATACCTTTTACTACTCCAGTGGCTGCAGTTCAAGTAGGATTAATAGGAGAAGAATTCATA
CTAAACCCTACTTCAAAGGAAAGAGAAGAAAGTTCACTTCAATTAACTGTTTGCGCAACTAAGGAAAGAGTTATGATGAT
TGAAGCTGGTGGAGATGAAATCCCAGAAGATACAATGATTAATGCTATCAAATTTGGTTTTGATAAGTGTCAAGATATAA
TAAAATTCCAAGAAGAAGCTGTAAGTATGTTCGGTAAAGAGAAAAAAGTGCCAGAACTACATAAAGTACCAGAAGAAATA
GAAGAAGCTGTAAGAGAATTTGCTTTTGATATGATTAGTGAGTCAATGCACATTACTGATAGAGATGAAAGAAATGCTGC
AATGGACGAAGTTAAAGCTAAAATAAATGAAGAGTTCGAAGAAAAATATCCAGATAACATGTCTGATATTGGAGAAGCAG
TTTATGATATGCAAAAAGAAGTCGTAAGACATATGCTTTTAAAAGAAGGAAAAAGACCTGATGGAAGAGCTTTTGATGAG
GTAAGAAACATTGGTTGTGAAGTTGGATTACTTCCAAGAACTCATGGAACAGGATTATTTACAAGAGGACTTACTCAAGT
AATGACTGTTGCAACTTTAGGATCAATAAGTGAAATTCAAATATTAGATGGTATTGGTGAAGAAGAATCTAAGAGATATA
TGCATCACTATAACTTCCCAGCATACAGTGTAGGAGAAGTTAGACCATTAAGAGGACCAGGTAGAAGAGAAATTGGTCAT
GGAGCTTTAGCTGAAAGAGCTTTAGAACCACTTATACCTTCAGAAGCTAAGTTCCCATACACAATAAGATTAGTATCAGA
AGTATTAAGCTCAAATGGATCTACTTCACAGGCTTCAGTTTGTGGTAGTACATTAGCACTTTTAGATGCTGGGGTTCCAA
TAAAGAGACCAGCAGCAGGTATAGCTATGGGATTAATAACTTCAAAAGATTTAACTGAGGAAGAAGTTTTAACTGATATC
CAAGGTTTAGAAGATTTCTTTGGAGATATGGACTTTAAAGTAGCTGGAACAGAAGAGGGAATAACTTCAATCCAAGTAGA
TACTAAAATAAAAGGTCTATCAGAAAAAGTTATACACGATGCTATATATGGAGCAAGAAAAGCAAGATTAATGATCTTAG
ATAAGATTAAAGAATGCATACCAGCTCCAAGAGAAGAAGTTTCAAAATATGCACCTAAAACATCAACTCTACAAATAGAT
CCTGAGAAAATCAGAGATGTAATTGGGGCTGGTGGAAAAGTTATAAACAAGATTATAGCTGACACTGGTGTTAAAATAGA
TATAAAAGAAGATGGATTAGTTTATGTTTCATCAGCTGAATCAGAAGGTGTTAAAGAAGCTGTTAAAATAATAGAAGGTT
TAACTAAAGAGGTTAAAGCTGGAGAAATTTATTTAGGTAAAGTTACAAAAATTGCTCAATTTGGTGCCTTTGTTGAGGTA
TTACCTAATAAAGAAGGATTAGTTCATATTTCTAAGTTAGATAATAAGAGAGTAGAAAAAGTTGAGGATGTAGTATCTGT
TGGAGATGAAATCTTAGTTAAGGTAACAGAAATAGATTCTCAAGGTAGAATAAATCTTTCAAGAAAAGATGCAATAAAAG
AAGCTGAAGAAGAAAATAAACAGCAATAG

Upstream 100 bases:

>100_bases
AGAAGATAATTTAGTAGAGCGGGTTTTTTACCGCTCTATTATTTTAAAAATATTAATATTGTAAAAATTTAGTCTTTATA
TACCGAAAGGAGGTATTTAT

Downstream 100 bases:

>100_bases
TAAAAGGCAATTATTATTGCCTTTTTATTTTTTTTCTTATTCATAAAGCCTACCTCTTTTAATAAGAATTGACATATATT
ATTTATAATCAACATATTAT

Product: polynucleotide phosphorylase/polyadenylase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>702_residues
MNHTHETIIAGRPMKVEFGKLGMLSDAAILMSYGDTVILTNVNASEKPREGIDFFPLSVEYEERLYSVGKIPGGFIKREG
KPSEKAILNGRAIDRPLRPLFPKGYRNDVQVVCTVVSVENDNLPEILAINAASMALCLSSIPFTTPVAAVQVGLIGEEFI
LNPTSKEREESSLQLTVCATKERVMMIEAGGDEIPEDTMINAIKFGFDKCQDIIKFQEEAVSMFGKEKKVPELHKVPEEI
EEAVREFAFDMISESMHITDRDERNAAMDEVKAKINEEFEEKYPDNMSDIGEAVYDMQKEVVRHMLLKEGKRPDGRAFDE
VRNIGCEVGLLPRTHGTGLFTRGLTQVMTVATLGSISEIQILDGIGEEESKRYMHHYNFPAYSVGEVRPLRGPGRREIGH
GALAERALEPLIPSEAKFPYTIRLVSEVLSSNGSTSQASVCGSTLALLDAGVPIKRPAAGIAMGLITSKDLTEEEVLTDI
QGLEDFFGDMDFKVAGTEEGITSIQVDTKIKGLSEKVIHDAIYGARKARLMILDKIKECIPAPREEVSKYAPKTSTLQID
PEKIRDVIGAGGKVINKIIADTGVKIDIKEDGLVYVSSAESEGVKEAVKIIEGLTKEVKAGEIYLGKVTKIAQFGAFVEV
LPNKEGLVHISKLDNKRVEKVEDVVSVGDEILVKVTEIDSQGRINLSRKDAIKEAEEENKQQ

Sequences:
NA

Specific function: NA

COG id: COG1185

COG function: function code J; Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase)

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA