| Definition | Clostridium perfringens ATCC 13124, complete genome. |
|---|---|
| Accession | NC_008261 |
| Length | 3,256,683 |
Click here to switch to the map view.
The map label for this gene is polA
Identifier: 110799426
GI number:
Start: 2496982
End: 2499582
Strand: Reverse
Name: polA
Synonym: CPF_2250
Alternate gene names: NA
Gene position: NA
Preceding gene: 110798998
Following gene: 110801385
Centisome position: NA
GC content: NA
Gene sequence:
>2601_bases ATGAAAAGATTATTGATATTAGACGGGAACAGTCTTTTAAATAGAGCCTTTTATGCTGTGCCTTTGCTTAGCAATAGTGA AGGAACTCATACAAATGCTATTTATGGTTTTACAAATATGCTTTTTAAGATGAGAGAGGATATAAAACCTGATTATATAG TTTGTACTTTTGATAAAAAAGCACCAACTTTTAGACATTTAGAGTATGGGGATTATAAGGCTGGAAGAAAGAAAATGCCT CCTGAGTTAGCAGAGCAGTTTCCTATTGTTAAGGAAATGCTAAAGTTATTTTCAATAACAACTTATGAATTAGATGGATT CGAAGCAGATGATATTATAGGAAGTTTAGCTAAGGTGGCTGAAGGTGAAGGAATCGAAGTTTATATTATGACTGGAGATA AGGATGCCCTTCAACTAGCAGCTAAGGATATAAATGTATGTATAACTAAGAAGGGTGTTTCTGAAATAGAAGTTTATAAC TATGATAGAATGGTTGAAGAATATGGAGTTACTCCTACTCAGTTCATAGATGTTAAAGGACTTATGGGAGATAAATCTGA TAATATTCCAGGGGTACCAGGAGTAGGAGAAAAAACAGCCTTTAAATTAATAAAAGAGTATGGTTCAGTAGAGGCAGTTT TAGAAAATATAGATAACATAAGTGGTAAAAAGTTAAAAGAAAATTTAACTGAGTACAGCGAACAGGCTATATTCTCTAAA AAGTTAGCTACTATTATGACTAATGTTCCTATAGATTTTGATTTAGATGAGATTAAATCAAAGGATGATTATAATAAAGA TCAGTTAAAAGCTTTATTTACAAAGCTTCAAATGAAATCTATATTAGATAAATTATCAAATGGGGAAGAAGAAGAGCCAG AAATAGAAGTTAAAATAACTAATATAGAAAATAGTAAAGAATTAGAAGAGTTATTTAAGAATATAAACGAAGAAGTATAT ATTAATTTTACTTATTTAAATAAAGAAAAGTATTCTACTATAGAGATTGATAAAATATTTATTAATTATGATGAGAAAAA TTATTTAATTAACTTTAAAGAGTTAGTAAAAGAAGAGGAGAATATTAAATCCTTTAAAGAATTTTTTGAGAATGAAGATA TATTAAAAAATGGCTATAGTATAAAAAATGCCTTAACAGCATTAAAAAAATTAGGAATAGATTTTAATGGATTAGCCTTT GATTGTGAATTAGCAGCATATTTAATAGATTCATCTAAGGGAGAATATACTCTTTTATCCTTAATAAATAACTATCTTTC AAAATTCCCTAATGTAAAAGAGGGGGAAGAAGACTTAGTTGGAATTTCATTTATGAAAGAGTTGACTTTAGTTCTAAAGA AAAAGATAGAAGAAGAGAAAATGGAAAGACTTATGTATGATATTGAGCTTCCTTTAGAAACAGTTTTATCTTCTATGGAA TCAATAGGGTTTAAAGTAAATAAAAATATTTTAGATGAGCTATCTATTAAGTTTAAAAGAGAGTTAGAGGAAACACAAAA AGAGATCTTTGAACTTGCAGATGAAGAGTTCAACATAAATTCTCCAAAACAATTAGGTAAGATATTATTTGAAAAATTAG ATTTACCAGTTATAAAGAAAACTAAAACTGGCTATTCAACTAACGCAGAAGTTTTAGAAAAGCTTAAGGACAAACATCCT ATAATAGAAAAAATAACATATTTTAGACAGCTTTCAAAAATATATTCAACTTATGTTGAAGGATTAAAGTCTGTTATAGA TACAGATGGTTCTATACATTCAACATTTAATCAAACTGTAACTACTACAGGTAGACTTTCATCAACAGAGCCTAATCTTC AAAATATACCTATAAAATACGAAATGGGTAGAGAAATAAGAAAGGTATTTATACCAAAAGAAGAAGGAGATTTATTAATA TCAGCTGACTACTCACAAATAGAACTTAGAGTTTTAGCTCATATTTCTGGTGATGAAAATATGATAGATGCATTTAATCA TCATTCAGATATACACACTAAGACTGCTTCTGAAGTATTTAAAGTTCCAGTTGAAGAGGTAACTCCATTAATGAGAAGTA GGGCTAAGGCAGTAAACTTTGGTATAGTATATGGAATAGGAGATTTTAGTCTTTCACAGGATTTAAATATTTCAAGAAAA GAAGCTAAAGAATATATGGATATATATTTTGAAAGATATCCAAAAATTAAAGAGTATATTTCTAAGGTTATTCATGAAGC TCAAACAAAGGGATATGTATTAACTATGTTAAATAGAAGAAGATATATACCTGAAGCAAATTCTTCAAATAAAATAGTAA AAGCCTTAGGAGAAAGACTTGCAATGAATGCTCCAATACAAGGAACAGCAGCAGATATAATAAAACTTGCTATGGTAAAT GTATATAACAAGTTAAAAGAATTAAATTTAAATAGTAAGTTAATATTACAGGTTCATGATGAACTTATAATAAATGTTGT AAAAGGAGAATTAGACATTGTTAAGAAACTTCTAAAAGAGGAAATGGAAAATACAATTAAATTAAGTGTACCATTAGATG TTGATGTTAATGTTGGAGAAGATTGGTATAAGTTAAAATAA
Upstream 100 bases:
>100_bases ATTTTATTTTAACTACTTTTTACAGAGTAGATTAGAAGTGAAATTTATTAATAGTAAAGTTTTTTGTTAGATTAATAGAA TAATATATTGGAGGATTAGA
Downstream 100 bases:
>100_bases GGAGGGTACTGATTCTATGATTAAAGTAGGCCTTACAGGAGGAATATGCTCAGGCAAAAGCACTATTTCTTCTATGATAA AAGAGGCAGGAATCCCAGTT
Product: DNA polymerase I
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>866_residues MKRLLILDGNSLLNRAFYAVPLLSNSEGTHTNAIYGFTNMLFKMREDIKPDYIVCTFDKKAPTFRHLEYGDYKAGRKKMP PELAEQFPIVKEMLKLFSITTYELDGFEADDIIGSLAKVAEGEGIEVYIMTGDKDALQLAAKDINVCITKKGVSEIEVYN YDRMVEEYGVTPTQFIDVKGLMGDKSDNIPGVPGVGEKTAFKLIKEYGSVEAVLENIDNISGKKLKENLTEYSEQAIFSK KLATIMTNVPIDFDLDEIKSKDDYNKDQLKALFTKLQMKSILDKLSNGEEEEPEIEVKITNIENSKELEELFKNINEEVY INFTYLNKEKYSTIEIDKIFINYDEKNYLINFKELVKEEENIKSFKEFFENEDILKNGYSIKNALTALKKLGIDFNGLAF DCELAAYLIDSSKGEYTLLSLINNYLSKFPNVKEGEEDLVGISFMKELTLVLKKKIEEEKMERLMYDIELPLETVLSSME SIGFKVNKNILDELSIKFKRELEETQKEIFELADEEFNINSPKQLGKILFEKLDLPVIKKTKTGYSTNAEVLEKLKDKHP IIEKITYFRQLSKIYSTYVEGLKSVIDTDGSIHSTFNQTVTTTGRLSSTEPNLQNIPIKYEMGREIRKVFIPKEEGDLLI SADYSQIELRVLAHISGDENMIDAFNHHSDIHTKTASEVFKVPVEEVTPLMRSRAKAVNFGIVYGIGDFSLSQDLNISRK EAKEYMDIYFERYPKIKEYISKVIHEAQTKGYVLTMLNRRRYIPEANSSNKIVKALGERLAMNAPIQGTAADIIKLAMVN VYNKLKELNLNSKLILQVHDELIINVVKGELDIVKKLLKEEMENTIKLSVPLDVDVNVGEDWYKLK
Sequences:
NA
Specific function: NA
COG id: COG0749
COG function: function code L; DNA polymerase I - 3'-5' exonuclease and polymerase domains
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA