Definition Clostridium perfringens ATCC 13124, complete genome.
Accession NC_008261
Length 3,256,683

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 110799132

GI number:

Start: 3045781

End: 3046761

Strand: Reverse

Name: Not Available

Synonym: CPF_2783

Alternate gene names: NA

Gene position: NA

Preceding gene: 110799940

Following gene: 110799156

Centisome position: NA

GC content: NA

Gene sequence:

>981_bases
ATGAAAATATCAAACATAGTTTTAGAAAATAATGTTTTCTTAGCACCTATGGCAGGGGTTACAGATATATCTTTTAGGGG
ATTATGTAAAGAGATGGGTGCAGGAATTGTTTGCACTGAAATGGTTAGTGCAAAGGCATTGTACTATGGGAGTGAAAATA
CAAAAGAATTAATGAGAATTGCAGATGAAGAAAAACCGGTATCTTGTCAGATGTTTGGAAATGATCCAGAGATAATGGCT
TATGTCACTGAGAAGCATTTTAATACAAATGATGATATATGTATAATAGATGTGAATATGGGATGTCCTGCACCTAAGAT
AGTAAAAAATGGTGAAGGTTCAGCCTTAATGAAAAATCCTAAATTAGCTTATGAGATCATGAGTAGCATAAAAAAAGTTG
CAACAAAGCCTGTAACAGTTAAGTTTAGAATGGGTTTTGATGAAGAAAATATAAATGCTGTTGAGTTTGCTAAAATCATG
GAAGAAGCAGGAGTAGATGCCATTGCTGTACATGGAAGAACTAGGGCTCAAATGTATGAAGGAAAAGCTAACTGGGATAT
AATAAGACAAGTAAAGGAAGCAGTTAATATTCCTGTTATAGGAAATGGAGATGTATTTACTGCGGAGGATGCTTTAAGTC
TTAAAAATCAAACTAACTGTGATGGAATTATGGTTGCAAGAGGAAGTATGGGAAACCCATGGATCTTCAAGCAAATAGTT
CAGAAATTAAATGGAGAAGAGGTTTATATGCCTACTCCAGAAGAAAAAATAGATATGTGTATAAGACACTATAATTTATC
ACTTAAATATGATGGAGAGTATAAGGCTGTAAGAGAAATGAGAAAACATGCAGCTTGGTATATAAAAGGATTAAATAATT
GTACTGAAGTTAAGAATAGGCTTAATTTAGAAGCTGATCCAGAGAAGATTATGGGTATCCTTAATGAGTATAAAGAATAT
TTAATGAAAAATGATTTATAA

Upstream 100 bases:

>100_bases
ACTTGTTTATAGCGAAACGGATGTAATTGATGAAGTAGATCGTAAATTAACTTTAGAAGGGCTTAAGATTCTTTACGAAA
AAAACAAGGAGTAGAAAGTA

Downstream 100 bases:

>100_bases
TATTTATCATAAATGGGGATATAACTGGATATAATAAAGCATCAGTAAAATATTAGATGTTTAATTTATACAAATAAAGG
TGAGAATTAAAGCTAAATAA

Product: putative dihydrouridine synthase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>326_residues
MKISNIVLENNVFLAPMAGVTDISFRGLCKEMGAGIVCTEMVSAKALYYGSENTKELMRIADEEKPVSCQMFGNDPEIMA
YVTEKHFNTNDDICIIDVNMGCPAPKIVKNGEGSALMKNPKLAYEIMSSIKKVATKPVTVKFRMGFDEENINAVEFAKIM
EEAGVDAIAVHGRTRAQMYEGKANWDIIRQVKEAVNIPVIGNGDVFTAEDALSLKNQTNCDGIMVARGSMGNPWIFKQIV
QKLNGEEVYMPTPEEKIDMCIRHYNLSLKYDGEYKAVREMRKHAAWYIKGLNNCTEVKNRLNLEADPEKIMGILNEYKEY
LMKNDL

Sequences:
NA

Specific function: NA

COG id: COG0042

COG function: function code J; tRNA-dihydrouridine synthase

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA