Definition Clostridium perfringens ATCC 13124, complete genome.
Accession NC_008261
Length 3,256,683

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The map label for this gene is polC

Identifier: 110799061

GI number:

Start: 2181712

End: 2186061

Strand: Reverse

Name: polC

Synonym: CPF_1945

Alternate gene names: NA

Gene position: NA

Preceding gene: 110800593

Following gene: 110799296

Centisome position: NA

GC content: NA

Gene sequence:

>4350_bases
TTGAGTAACGAGTTTGTTAAACAGATTAACAGATCCATAAAATCAGATGATAATCTTAATGATTTAGAGTTTGAAATAAC
TAAGTTTCAATTGTTGAAGAAAAGCAATACTTTAAGAACCATAATAAAAAGTAAAGATCAATTATCAGAAGAACAAAAGA
AAATAATTAAGCAATATATAAAAAAAGCTATAGGTTTTGAAATAAATATAGAGATTATGTATTACATAGATATTTCTGAT
ATAACTTTAAAACAGGTAGTAGATCAGCATTGGAATCATGTTTGTGAAAAAATTATAGAGAAACATCCTGTTTTAAAAGA
AGTTTTACTTAATTCTCCTATAGTAATTGAAGGAGAAAAAATAATTATAAAAAATGGTTCTGAGTTTTTATGTACTTTTG
TTAATAAAAAACATATAGATAGAGAGATTAAGGGATATATAAAATCATTCTTTGGAATAAATTCTTTAGTAGAAGTTAAA
TATGATGAAAGTTTAGCTAATAAGAATTACAATGATGAAAAGTTAAATGAAAACAAAGAAATAGCTAAAAAAGTTATAGA
AACTATGAAAGCTCAAGCTGCTCAAGAAAAGCCTGTTAAAAAGGAAATTAGTGATAATAAACATAAATCTAATGGTGGCA
ATAAAGGTGGTTATGAGAAAAAATCTTATAAAGATGAGCCTAAGAATGAAAATACTATACTGGGAAGAAATATTCAAGGA
GATACTATAGATATAAGCAGTATAGATATGGGATCTGGAATTGTTACTATTTCAGGAGATGTATTTAAAACTGATATTTT
TGAAACTAAGACAGGTAGAATAATACTTACATTCTTCATAACAGACTATACAAGTTCTATAGCCGTTAAATGCTTCTTAA
GAGATAAGGATAAAGAACATGTTTTAGAAAATGTTAAAAAAGGTCTTTATTGTAAAGTAAGAGGGGAAGCTACTATGGAT
CCTTATGCTAAGGAAGTTGTAATAATGGCTAGGGATATAAATAAGCTTACAAAAATAGAGCGTATGGATACAGCAGAGGA
AAAAAGAGTAGAGCTTCATATGCATACAACTATGAGCTCAATGGATGCCGTAACTGCTGCAAGTAAAATTGTTGAGAGAG
CAGCAAAGTTTGGACATAAGGCTGTAGCCATAACAGACCATGGAGTTGTTCAGGCCTTTCCAGATGCTCAAATAGCTGCT
AAAAAGAATAACATAAAAGTTATTTATGGGGTAGAGGGATATTTAGCTGATAATGGAACACCTATAGTTATTAATGGGCA
TGAGGAATCCTTTGATGATGAGTATGTGGTTTTTGATATAGAAACCACAGGTTTTTCAAGTAAAAATGATAAGATTATAG
AAATTGGTGCTGTTAAGTTAAAGGATGGAGAAATAGTTGATTCCTTTAGTACTTTTGTTGATCCAAAGGTAAATATTCCA
TATAAGATTACAGAGCTTACAAGTATAACTCAAAATATGGTTAATGGACAGCCTACTATAGATGAAGTGCTTCCTAAATT
TATGGAATTTGTAGGAGATTCTGTACTAGTAGCCCACAATGCTGCCTTTGACGTTGGTTTTATAAAAAAGAACTTAATGG
ATATGGGAAAAACTTTAAAGAATCCTGTAATGGATACTGTTCCTTTAGCTAGATATCTTTATCCAGATTTAAAAAAGGTT
AAGTTAAATCTAGTTGCTAAACATTTAGGAATTAGCCTTGAAAATCACCATAGAGCTGTTGATGATGCAAAGGCTACTGC
GGAGATATTAAAGTTTTCTTTCAAAAAGATGAAAGAAGAAATGGATATTCATGATGTTAAAACTCTAAATGAAAAGTATT
TATCAAATATAGATGTAAAGAAACTTCCTCTACATCACATAATAATATTAGCTAAAAATCAAACTGGAATTAAGAATTTA
TATAAATTAGTTTCTATGGCTCACTTAGATTATTTTGCTAGAAGACCAAGACTTCCTAAAAGTATAATAACTGAGTATAG
AGAAGGTTTAATAATTGGTTCAGCTTGTGAAGCAGGACAATTATATAAGGCAGTTTTAGAAGGAAAGACAGATGGGGAAT
TAAAAGAAATAGCATCTTTCTATGATTATCTAGAAATTCAGCCAATACAAAATAATGAATTCCTTATAAGAAAAGGAAAT
GTAAAAGATGAAGAAGAACTTAGAGAGTTAAATAGAAAAATATATGATTTAGGAAAGGAAATGGATAAACCAGTAGTGGC
TACATGCGATTGTCATTTCTTAGATCCTAATGATGAAGTATTTAGAAGAATAATAATGGCTGGTCAAGGATATGGAGATG
CAGATAATCAACCACCTTTATATTTTAGAACTACTAATGAAATGATGAAAGAGTTTGAATATTTAGGAGAAGAGGCTTGC
AGGGAAGTTGTAATAGAAAATACTCAGAAGATAGCTGATATGGTTGAGGCTGTAAAACCTATACCAGATGAAACATTTCC
TCCTAAAATAGAGGGGGCTGAGGAAGAAATAAGAAACATGACTATGAATAAGGTTCATAGTATATATGGAGAAAATCTTC
CTGAAGTTGTTCAAAAGAGATTAGATAAAGAACTTAATTCTATAATAAATAATGGATATGCGGTGCTTTATCTTATAGCT
CAAAAATTAGTTGCTAAATCCTTAGAAGACGGATACCTAGTTGGTTCAAGGGGGTCTGTTGGTTCCTCTTTCGTAGCAAC
AATGTCAGATATAACAGAGGTTAATGGATTACCACCTCATTATGTTTGTCCAAATTGTAAGAAATCAGAATTTTTCTTAG
ATGGTTCTATAAGTTCAGGAGCAGATTTACCAGATAAAAATTGTCCTGATTGTGGAGCTAAGTATATTAAGGATGGCCAT
GATATTCCTTTCGAAACATTCTTAGGTTTTGAAGGAGATAAAGAACCAGATATAGACCTTAACTTCTCAGGGGAATACCA
AGCTGTTGTACATAAGTACACAGAGGTTCTTTTCGGAAAAGGATATGTATTTAAAGCTGGAACTATAGGTACAGTAGCTG
AAAAAACAGCTTATGGTTTTGTAAAAAAATACCTTCAAGAAAGAGGATTAGTTGTATCTCAAGCTGAAATAGAAAGGCTT
ACTATTGGATGTACTGGAATAAAAAGAACTAGTGGACAGCATCCTGGTGGAATCATGGTTGTTCCAAATGACAATGAAAT
ATATAATTTTTGTCCAATACAACATCCAGCTGATGATGTTAACACAGATATTATAACAACTCACTTTGATTACCATTCAA
TAAGTGGTAGACTTCTTAAGCTTGATATACTTGGACACGACGACCCGACCGTTCTTAGAATGCTTCAAGACTTAACTGGC
TTAGATCCTAAGACAATACCTTTAAATGATCCTAAGGTTATAAGTTTATTTACATCACCAGATGCCTTAGGGGTAACTAA
AGAAGAATTAGGATGTGAAGTTGGTAGTTATGGACTTCCTGAGTTCGGTACTAAATTCGTTAGACAGATGCTAGTTGATA
CTCAACCTAAGAGTTTTGCAGACCTTGTGAGAATATCTGGACTTTCACATGGTACTGATGTTTGGCTTAATAATGCTCAG
TACTTTATTAAGGAAGGTTATACTACACTAAAAGACTGTATAGCAACAAGAGACGATATTATGGTTTATCTTATGTATAA
AGATCTTCCTCCTAAGACAGCCTTTACTATAATGGAAAAGGTAAGAAAGGGAAAAGGACTTAGTGAAGATGATGAAGCTT
TAATGAGAGAGAAAAATGTACCAGATTGGTATATTGAATCTTGTAAAAGAATAAAATATATGTTCCCTAAAGGCCATGCT
GTTGCATATGTTATGATGGCAGTTAGAATAGCATATTATAAAGTTTATTATCCAGAAGCATATTACACAACATATTTTAC
AGTAAGAGCTGATGATTTCGATGCAGACTTAATTTGTAAGGGTGAAGAAGCAATAAAGGCAAAGATGGAAGAACTAAATT
CTTTAGGAAATAACATATCAGTAAAAGAAAAAGGTCTTTTAACTATTTTAGAAATTTCTTATGAAATGTATAAAAGAGGA
TTGAATTTCTTAAAGGTTGATTTATATAAATCAGAAGCAACTAAGTTTAAGATAGAAGAAGATGGTATAAGACCTCCATT
AAATGCTCTTCAAGGAGTTGGAGACAATGCTGCAAAAAGTATAGTTGAATGTAGAGTTAATGGAGAGTTTATTTCAAAGG
AAGATTTAAGACTTAGATCTAAGGTTTCAAAGACTGTAATAGAAACTTTAGATAATCATGGATGCCTAGAAGGAATGCAA
GAAAGTAACCAACTTAGTTTGTTTGGCTAA

Upstream 100 bases:

>100_bases
TAAAGATAATAGAAACAATATAATTTAAAGGAGGGATTAATATCCCTTCTTTATGTCGTATAGGGATAAATTAAAATAAA
ATTCAAAGGAGGCTTAGATT

Downstream 100 bases:

>100_bases
TTTTAAAAATTTCTTGTAATATAAAATATACTATGTTACTATATAAGTAGAAGTTTTTTACTAATAGTTTGAGGTAAAGG
AGTGGGACAGAAAAGCCCGC

Product: DNA polymerase III PolC

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1449_residues
MSNEFVKQINRSIKSDDNLNDLEFEITKFQLLKKSNTLRTIIKSKDQLSEEQKKIIKQYIKKAIGFEINIEIMYYIDISD
ITLKQVVDQHWNHVCEKIIEKHPVLKEVLLNSPIVIEGEKIIIKNGSEFLCTFVNKKHIDREIKGYIKSFFGINSLVEVK
YDESLANKNYNDEKLNENKEIAKKVIETMKAQAAQEKPVKKEISDNKHKSNGGNKGGYEKKSYKDEPKNENTILGRNIQG
DTIDISSIDMGSGIVTISGDVFKTDIFETKTGRIILTFFITDYTSSIAVKCFLRDKDKEHVLENVKKGLYCKVRGEATMD
PYAKEVVIMARDINKLTKIERMDTAEEKRVELHMHTTMSSMDAVTAASKIVERAAKFGHKAVAITDHGVVQAFPDAQIAA
KKNNIKVIYGVEGYLADNGTPIVINGHEESFDDEYVVFDIETTGFSSKNDKIIEIGAVKLKDGEIVDSFSTFVDPKVNIP
YKITELTSITQNMVNGQPTIDEVLPKFMEFVGDSVLVAHNAAFDVGFIKKNLMDMGKTLKNPVMDTVPLARYLYPDLKKV
KLNLVAKHLGISLENHHRAVDDAKATAEILKFSFKKMKEEMDIHDVKTLNEKYLSNIDVKKLPLHHIIILAKNQTGIKNL
YKLVSMAHLDYFARRPRLPKSIITEYREGLIIGSACEAGQLYKAVLEGKTDGELKEIASFYDYLEIQPIQNNEFLIRKGN
VKDEEELRELNRKIYDLGKEMDKPVVATCDCHFLDPNDEVFRRIIMAGQGYGDADNQPPLYFRTTNEMMKEFEYLGEEAC
REVVIENTQKIADMVEAVKPIPDETFPPKIEGAEEEIRNMTMNKVHSIYGENLPEVVQKRLDKELNSIINNGYAVLYLIA
QKLVAKSLEDGYLVGSRGSVGSSFVATMSDITEVNGLPPHYVCPNCKKSEFFLDGSISSGADLPDKNCPDCGAKYIKDGH
DIPFETFLGFEGDKEPDIDLNFSGEYQAVVHKYTEVLFGKGYVFKAGTIGTVAEKTAYGFVKKYLQERGLVVSQAEIERL
TIGCTGIKRTSGQHPGGIMVVPNDNEIYNFCPIQHPADDVNTDIITTHFDYHSISGRLLKLDILGHDDPTVLRMLQDLTG
LDPKTIPLNDPKVISLFTSPDALGVTKEELGCEVGSYGLPEFGTKFVRQMLVDTQPKSFADLVRISGLSHGTDVWLNNAQ
YFIKEGYTTLKDCIATRDDIMVYLMYKDLPPKTAFTIMEKVRKGKGLSEDDEALMREKNVPDWYIESCKRIKYMFPKGHA
VAYVMMAVRIAYYKVYYPEAYYTTYFTVRADDFDADLICKGEEAIKAKMEELNSLGNNISVKEKGLLTILEISYEMYKRG
LNFLKVDLYKSEATKFKIEEDGIRPPLNALQGVGDNAAKSIVECRVNGEFISKEDLRLRSKVSKTVIETLDNHGCLEGMQ
ESNQLSLFG

Sequences:
NA

Specific function: NA

COG id: COG2176

COG function: function code L; DNA polymerase III, alpha subunit (gram-positive type)

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA