Definition Clostridium perfringens ATCC 13124, complete genome.
Accession NC_008261
Length 3,256,683

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The map label for this gene is rpoA

Identifier: 110799041

GI number:

Start: 2959822

End: 2960769

Strand: Reverse

Name: rpoA

Synonym: CPF_2685

Alternate gene names: NA

Gene position: NA

Preceding gene: 110801306

Following gene: 110800144

Centisome position: NA

GC content: NA

Gene sequence:

>948_bases
ATGTTAGAAATAGAAAAGCCAGTAATTCAATGTGTTGAATCAAACGATAACGGAACATATGGTAAGTTTGAGATAGAACC
ATTAGAAAGAGGTTATGGAATAACTCTTGGTAATGCATTAAGAAGAATATTACTTTCTTCTTTACCTGGAGTGGCTCCAA
CTTCAGTTAAAATAGATTCAGTTCTTCATGAGTTTTCAACAATAACAGGTGTTAAAGAAGATGTTACAGAGATAATCTTA
AATCTTAAAATGTTAGCACTTACTATGGAAGGTGAAGGACCAAAAACTATTTATATTGATGCTCAAGGACCAGGTGTTGT
TACTGGAGCAGATATAAAAACAGATGGTGATGTAGAAGTTGTAAACAAAGATCTACATATCGCTACATTAGACAACGATG
GTAAGTTATATATGGAAATCGTAGTTAATAGAGGAAGAGGATATGTTACTCAAAACAAAAATAAAACAGAAGATCTTCCA
TTATCAGCTATTGCTATAGATTCTATATACACTCCTGTAAAGAGAGTTAATTTCTCTGTTCAAAATACAAGAGTTGGTCA
AATTACTGACTATGATAAACTTACATTAGAAATTTGGACTAATGGAACTATAAGAATAGAAGAAGCGATTTCATTATCAG
CTAAAATTCTTATAGAGCACTTCAAATTATTCATGACTTTAACTGACAACGCTAATGATGTTGAGATAATGATTGAAAAA
GAAGAAGATAAAAAAGAAAAAGCTTTAGAGATGACTATAGAAGAGCTTGACTTATCAGTAAGATCATACAATTGCTTAAA
GAGAGCAGGTATAAACACTGTTCAAGAGCTTGCGGGCAAGAGCATGGATGATATGATGAAAGTTAGAAACTTAGGTAAGA
AATCTCTAGAAGAAGTAGAAAGAAAGTTAAACGAGTTAGGCTTAAATTTAAGACTAAATGACGAGTAG

Upstream 100 bases:

>100_bases
GTTATACAGCAAATAATAATTATTGATCTTAAGAGTACTTTTACAATTGGATCAGTTGCCCTCATAAGGTTGCCATTTTA
ATATTAAGGAGGGTTTTTAA

Downstream 100 bases:

>100_bases
GTGAGGAGGTAAAGCCATGGCAGGATATCGTAAGTTAGGTCGTCCTACTGATCAAAGAAAAGCTATGCTTAGAAATCTTG
TTACAAGCTTCTTAAAGCAT

Product: DNA-directed RNA polymerase subunit alpha

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>315_residues
MLEIEKPVIQCVESNDNGTYGKFEIEPLERGYGITLGNALRRILLSSLPGVAPTSVKIDSVLHEFSTITGVKEDVTEIIL
NLKMLALTMEGEGPKTIYIDAQGPGVVTGADIKTDGDVEVVNKDLHIATLDNDGKLYMEIVVNRGRGYVTQNKNKTEDLP
LSAIAIDSIYTPVKRVNFSVQNTRVGQITDYDKLTLEIWTNGTIRIEEAISLSAKILIEHFKLFMTLTDNANDVEIMIEK
EEDKKEKALEMTIEELDLSVRSYNCLKRAGINTVQELAGKSMDDMMKVRNLGKKSLEEVERKLNELGLNLRLNDE

Sequences:
NA

Specific function: NA

COG id: COG0202

COG function: function code K; DNA-directed RNA polymerase, alpha subunit/40 kD subunit

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA