Click here to switch to the map view.

The map label for this gene is lktD [H]

Identifier: 110680878

GI number: 110680878

Start: 3601710

End: 3602897

Strand: Direct

Name: lktD [H]

Synonym: RD1_3728

Alternate gene names: 110680878

Gene position: 3601710-3602897 (Clockwise)

Preceding gene: 110680877

Following gene: 110680879

Centisome position: 87.14

GC content: 50.84

Gene sequence:

>1188_bases
TTGTGGATGGCCGCCTCCACAGTCGTTCCTGAGTTGACACGCGCAAGCGGCGCGCTTGTTCCGACCGGAAGATACCACCA
GATTCAGGCACCAGAAAGCGGGACAGTCGTTTCAGTTCACGTTCACGAAGGACAAGTGGTTCAAACCGGTGACGTTTTGG
CTGAGCTATCCTCCGCATCCCTGGACCAACTCGAACAAAACCTGCGCCAAGAGCTTCTGGCGATTGAAACAAAAGTGAAA
AATTTTCAGGCAATAATTGCAGGTGTTACAACCGACAATCCGACGACTGAGCCCTTGTCCAATCCTGAGATGGAGTTTGC
TGATACCCAACTGCAACTCTTTGAGAGCAGACAGCGCGCGCAGAAGGAATTGATAACAAGGCTGGAAGAAACGCTCGCAA
CGCTTGAGCGTGCGCGAAAACTAGCCGAAAAGCGCGTGATCGCCAAAACACTGTCAGTCCAAAAAGATGAAGACCTGTTC
AACAAAGGGCTGACCACTTCGCGCGATCTTGATGCGCAAAAGGACCGACTGGACCAATTGCAGGCGCGCCTCGTTGATGT
AGATGTACGACTGTCCCAACTTCAAAAGGAGGTTAGCCTTTCGCAATCCTCGGTCGTGCAAAACCGCCTGTCTATGGAGG
AAAAATACACCGAAAAGCTGTTTGAACTGGAATTGCAACGCGAGGCGCTGAAGGGTCAATTGGAAACCGTTGTGCAACAA
CGCGACAAGCTGAAATTACGCTCGCCCGCAAACGGCGTTCTACACGCAATTGGCTTCCCAAATCCGGGCGAAATCGTGAA
TGTTGGGGACGTACTTTTTGAACTTCTTCCAACTCAGCAAAGCCTTGTTGCAGAGATTGAAGTGAACCCATCTGACATCG
GTCATGTTTCAACGGGTGATCCGGTTGCATTGAAGTTCGACACCTTCGATCCGAGACGATACGGGCAAGTGGAGGGCGAA
ATCATAAGTATCTCACCTAATTCGGTGATGGATAGCGATACGGGTCAAGAACACTTTCGTGCCACTGTTGCCTTGGGCAA
CGCCTCGATAGGTGAAGGTGTCTGGCAAAGGGATTTGAAATCCGGCATGACTGCAACGGCCGAAATTGTGACTGATGAAC
GAACGGTATTGGCATATCTGCTAAAACCAATCAGCCGTTCGCTGGAAAACGCATTTGGGGAGAGGTAG

Upstream 100 bases:

>100_bases
AAAGGGTGTTTTCGCGAAGTCTGACGCCCGCGCAGCGCGGCGGGGCCCGAAACTGGCCAGCCTGCTGATCCTGACGCTTG
TTGGCTTTCTTGGTGGTTCC

Downstream 100 bases:

>100_bases
CGCTCGCAATTTCCATATCCGTCACAGCCTAAGCACTCACACAGGCAAACTCGGCATCTGTCCAAGGCGGTAACCGATTT
CTCGAACGTTTTTCTCGCAC

Product: leukotoxin secretion protein D, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 395; Mature: 395

Protein sequence:

>395_residues
MWMAASTVVPELTRASGALVPTGRYHQIQAPESGTVVSVHVHEGQVVQTGDVLAELSSASLDQLEQNLRQELLAIETKVK
NFQAIIAGVTTDNPTTEPLSNPEMEFADTQLQLFESRQRAQKELITRLEETLATLERARKLAEKRVIAKTLSVQKDEDLF
NKGLTTSRDLDAQKDRLDQLQARLVDVDVRLSQLQKEVSLSQSSVVQNRLSMEEKYTEKLFELELQREALKGQLETVVQQ
RDKLKLRSPANGVLHAIGFPNPGEIVNVGDVLFELLPTQQSLVAEIEVNPSDIGHVSTGDPVALKFDTFDPRRYGQVEGE
IISISPNSVMDSDTGQEHFRATVALGNASIGEGVWQRDLKSGMTATAEIVTDERTVLAYLLKPISRSLENAFGER

Sequences:

>Translated_395_residues
MWMAASTVVPELTRASGALVPTGRYHQIQAPESGTVVSVHVHEGQVVQTGDVLAELSSASLDQLEQNLRQELLAIETKVK
NFQAIIAGVTTDNPTTEPLSNPEMEFADTQLQLFESRQRAQKELITRLEETLATLERARKLAEKRVIAKTLSVQKDEDLF
NKGLTTSRDLDAQKDRLDQLQARLVDVDVRLSQLQKEVSLSQSSVVQNRLSMEEKYTEKLFELELQREALKGQLETVVQQ
RDKLKLRSPANGVLHAIGFPNPGEIVNVGDVLFELLPTQQSLVAEIEVNPSDIGHVSTGDPVALKFDTFDPRRYGQVEGE
IISISPNSVMDSDTGQEHFRATVALGNASIGEGVWQRDLKSGMTATAEIVTDERTVLAYLLKPISRSLENAFGER
>Mature_395_residues
MWMAASTVVPELTRASGALVPTGRYHQIQAPESGTVVSVHVHEGQVVQTGDVLAELSSASLDQLEQNLRQELLAIETKVK
NFQAIIAGVTTDNPTTEPLSNPEMEFADTQLQLFESRQRAQKELITRLEETLATLERARKLAEKRVIAKTLSVQKDEDLF
NKGLTTSRDLDAQKDRLDQLQARLVDVDVRLSQLQKEVSLSQSSVVQNRLSMEEKYTEKLFELELQREALKGQLETVVQQ
RDKLKLRSPANGVLHAIGFPNPGEIVNVGDVLFELLPTQQSLVAEIEVNPSDIGHVSTGDPVALKFDTFDPRRYGQVEGE
IISISPNSVMDSDTGQEHFRATVALGNASIGEGVWQRDLKSGMTATAEIVTDERTVLAYLLKPISRSLENAFGER

Specific function: Involved in the transport of the Leukotoxin [H]

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003997
- InterPro:   IPR006143
- InterPro:   IPR006144
- InterPro:   IPR010129 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 43735; Mature: 43735

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWMAASTVVPELTRASGALVPTGRYHQIQAPESGTVVSVHVHEGQVVQTGDVLAELSSAS
CCCCCHHHHHHHHHCCCCCCCCCCCEEEECCCCCCEEEEEECCCCEEEHHHHHHHHHHHH
LDQLEQNLRQELLAIETKVKNFQAIIAGVTTDNPTTEPLSNPEMEFADTQLQLFESRQRA
HHHHHHHHHHHHHHHHHHHHHHEEHEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
QKELITRLEETLATLERARKLAEKRVIAKTLSVQKDEDLFNKGLTTSRDLDAQKDRLDQL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCHHHHHHHHH
QARLVDVDVRLSQLQKEVSLSQSSVVQNRLSMEEKYTEKLFELELQREALKGQLETVVQQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RDKLKLRSPANGVLHAIGFPNPGEIVNVGDVLFELLPTQQSLVAEIEVNPSDIGHVSTGD
HHCCCCCCCCCCCEEECCCCCCCCEEEHHHHHHHHHCCCHHEEEEEECCHHHCCCCCCCC
PVALKFDTFDPRRYGQVEGEIISISPNSVMDSDTGQEHFRATVALGNASIGEGVWQRDLK
CEEEEECCCCCHHCCCCCCEEEEECCCCCCCCCCCHHHHEEEEEECCCCHHHHHHHHHHH
SGMTATAEIVTDERTVLAYLLKPISRSLENAFGER
CCCCEEHHHHCCCHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MWMAASTVVPELTRASGALVPTGRYHQIQAPESGTVVSVHVHEGQVVQTGDVLAELSSAS
CCCCCHHHHHHHHHCCCCCCCCCCCEEEECCCCCCEEEEEECCCCEEEHHHHHHHHHHHH
LDQLEQNLRQELLAIETKVKNFQAIIAGVTTDNPTTEPLSNPEMEFADTQLQLFESRQRA
HHHHHHHHHHHHHHHHHHHHHHEEHEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
QKELITRLEETLATLERARKLAEKRVIAKTLSVQKDEDLFNKGLTTSRDLDAQKDRLDQL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCHHHHHHHHH
QARLVDVDVRLSQLQKEVSLSQSSVVQNRLSMEEKYTEKLFELELQREALKGQLETVVQQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RDKLKLRSPANGVLHAIGFPNPGEIVNVGDVLFELLPTQQSLVAEIEVNPSDIGHVSTGD
HHCCCCCCCCCCCEEECCCCCCCCEEEHHHHHHHHHCCCHHEEEEEECCHHHCCCCCCCC
PVALKFDTFDPRRYGQVEGEIISISPNSVMDSDTGQEHFRATVALGNASIGEGVWQRDLK
CEEEEECCCCCHHCCCCCCEEEEECCCCCCCCCCCHHHHEEEEEECCCCHHHHHHHHHHH
SGMTATAEIVTDERTVLAYLLKPISRSLENAFGER
CCCCEEHHHHCCCHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 3040588; 2914876; 2707120 [H]