| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is 110680842
Identifier: 110680842
GI number: 110680842
Start: 3556240
End: 3556341
Strand: Direct
Name: 110680842
Synonym: RD1_3691
Alternate gene names: NA
Gene position: 3556240-3556341 (Clockwise)
Preceding gene: 110680838
Following gene: 110680844
Centisome position: 86.04
GC content: 44.12
Gene sequence:
>102_bases TTGCGCAAGAGTGAAGAGGTGGATGCCAGCCAGCTATTCATGCCCATAATCCTCAAAGCGATTTCGTTTCTTCAATCGCA TAAAATGCGCAGTTTTGGTTAA
Upstream 100 bases:
>100_bases CGCTTCCAGATCATCAAGGCCGCGCAGCGCGTCTTCGGAAAACCCCTGCATCTTGCGCGCAGGCGGGTGTTTCAGGTCCG AGCCCGAAGACCTCTTCTTC
Downstream 100 bases:
>100_bases AGCACGGTTAACCAAAACAGGGGGACATCCCTTTTGGCGCGCAATCGGCCTGCTTTGGCGGCACCGTTGTGCGGTGATCC TTGCCCTGACGGTTCTGTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 33; Mature: 33
Protein sequence:
>33_residues MRKSEEVDASQLFMPIILKAISFLQSHKMRSFG
Sequences:
>Translated_33_residues MRKSEEVDASQLFMPIILKAISFLQSHKMRSFG >Mature_33_residues MRKSEEVDASQLFMPIILKAISFLQSHKMRSFG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 3827; Mature: 3827
Theoretical pI: Translated: 10.50; Mature: 10.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 9.1 %Met (Translated Protein) 9.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 9.1 %Met (Mature Protein) 9.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKSEEVDASQLFMPIILKAISFLQSHKMRSFG CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRKSEEVDASQLFMPIILKAISFLQSHKMRSFG CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA