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The map label for this gene is cybB [C]

Identifier: 110680807

GI number: 110680807

Start: 3518094

End: 3518633

Strand: Direct

Name: cybB [C]

Synonym: RD1_3654

Alternate gene names: 110680807

Gene position: 3518094-3518633 (Clockwise)

Preceding gene: 110680806

Following gene: 110680815

Centisome position: 85.12

GC content: 60.19

Gene sequence:

>540_bases
ATGCCACGATTTTTCGACACCCCTGAACGGTACAGCCTCATTTCCCGGAGCCTCCATTGGGGCATGGCCCTGCTCTTCGC
GATGCAATTTGTCACCTCGGCGACCCGCTGGGCCCTGCCCCGCGAAGACCCCATACGCGAATTTTTCTGGGCCTATCACG
CACCTATCGGCACCACGCTGTTTCTGCTCGTGCTGTTGCGCGGTCTCTGGGGGCTGATCAACATGCACCGCCGCCCTGCA
CATGGCTCAGGCCTGATCGGGCGCATGGCACGTGTGGGGCATCTGGCGATCTATGCGCTTATGGTGATTGTTCCCACACT
CCGCCTGATTGCCGCGGCAGGCAGCACCCGAGGCTTCAGCTATCTGGGCGTTGAAATCTTTGCCGCGCGTGAGACTGAAA
TCGCGTGGATGGATGCAATGGCCGAATGGCATGGGGAACTGGGCTGGATCCTCGGCCTGCTCGTTCTGGGCCATATCGCG
ATGGCGGTCGGCTGGCATCATTTTATCAAACGCGATGGCACCTTGCAGCGTATGACCTGA

Upstream 100 bases:

>100_bases
TTTTCGCTATGCGGCGGATCTTGAGCCACAACCAAGCGCGCGCGTATCACGCGACCCCGCGCCACCAACGACACACCTAA
TTCGAAACAGAGGAGCCAGA

Downstream 100 bases:

>100_bases
GCGATGCCCCTGTCACAAAGGTCAGGCAGCACACACTGAAGCGCCATGCGAAAAACCGCGATCACGTAACGCTGCCTGAA
ATCAAGGATTGCAACGCGTT

Product: cytochrome b561, putative

Products: NA

Alternate protein names: Cytochrome

Number of amino acids: Translated: 179; Mature: 178

Protein sequence:

>179_residues
MPRFFDTPERYSLISRSLHWGMALLFAMQFVTSATRWALPREDPIREFFWAYHAPIGTTLFLLVLLRGLWGLINMHRRPA
HGSGLIGRMARVGHLAIYALMVIVPTLRLIAAAGSTRGFSYLGVEIFAARETEIAWMDAMAEWHGELGWILGLLVLGHIA
MAVGWHHFIKRDGTLQRMT

Sequences:

>Translated_179_residues
MPRFFDTPERYSLISRSLHWGMALLFAMQFVTSATRWALPREDPIREFFWAYHAPIGTTLFLLVLLRGLWGLINMHRRPA
HGSGLIGRMARVGHLAIYALMVIVPTLRLIAAAGSTRGFSYLGVEIFAARETEIAWMDAMAEWHGELGWILGLLVLGHIA
MAVGWHHFIKRDGTLQRMT
>Mature_178_residues
PRFFDTPERYSLISRSLHWGMALLFAMQFVTSATRWALPREDPIREFFWAYHAPIGTTLFLLVLLRGLWGLINMHRRPAH
GSGLIGRMARVGHLAIYALMVIVPTLRLIAAAGSTRGFSYLGVEIFAARETEIAWMDAMAEWHGELGWILGLLVLGHIAM
AVGWHHFIKRDGTLQRMT

Specific function: Unknown

COG id: COG3038

COG function: function code C; Cytochrome B561

Gene ontology:

Cell location: Integral membrane protein (Potential) [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787296, Length=178, Percent_Identity=29.7752808988764, Blast_Score=61, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20341; Mature: 20210

Theoretical pI: Translated: 10.75; Mature: 10.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRFFDTPERYSLISRSLHWGMALLFAMQFVTSATRWALPREDPIREFFWAYHAPIGTTL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHH
FLLVLLRGLWGLINMHRRPAHGSGLIGRMARVGHLAIYALMVIVPTLRLIAAAGSTRGFS
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
YLGVEIFAARETEIAWMDAMAEWHGELGWILGLLVLGHIAMAVGWHHFIKRDGTLQRMT
HHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
PRFFDTPERYSLISRSLHWGMALLFAMQFVTSATRWALPREDPIREFFWAYHAPIGTTL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHH
FLLVLLRGLWGLINMHRRPAHGSGLIGRMARVGHLAIYALMVIVPTLRLIAAAGSTRGFS
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
YLGVEIFAARETEIAWMDAMAEWHGELGWILGLLVLGHIAMAVGWHHFIKRDGTLQRMT
HHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA