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The map label for this gene is 110680778

Identifier: 110680778

GI number: 110680778

Start: 3484894

End: 3486315

Strand: Direct

Name: 110680778

Synonym: RD1_3621

Alternate gene names: NA

Gene position: 3484894-3486315 (Clockwise)

Preceding gene: 110680777

Following gene: 110680779

Centisome position: 84.32

GC content: 58.23

Gene sequence:

>1422_bases
ATGGCCGGTGTCGGCATGTCGGCTTTCGCCGCAGGCTCGCTCGGCGGTTTCCGCTCCTTTGGCAACATGGCGATGGCCGA
TGCCCATGGGGAGACGCCGGAGGATGTCGCGAACTTCCTGCGTGAAGCGGGCAAGCCCTTCGCCGGCACCACGATCCGCT
ACACCTCGGAATCAACACCGCCCACCGTTGTTCTGAACCAGCTGAAATCCGAGTTCACCGAGTTGACCGGGATCAACGTG
GAAATCGAAATCGTGCCACTTGAGCAGGTTCTGGCCAAGGCGACACAGGACGTTCAGGGCCAGCTTGGCACCTATGACCT
TTACTACCTCGATCAGGCGTGGACTGCGACTTTCTCGCGCGACACGATTGATCCACGGGAATATTATGCCGACAAGCCCG
ACCTTGCGATGCCGGGTTTCGATTTTGATGACTTCTCCGAGCCCTTGGTCGAAGGCATCAGCCTTTATCAGGACAAGTGG
ATCGGCCTTCCCTTCGACATTCCGATCTTTACGCTGATGTACCGCAAGGACATCCTTGAAAAGCACGGCATTGCAGTTCC
CCAGACCTATGAAGACTTCACGCAGGCAGTGGAACTGATCACCGCAGCAGAGCAGGAAAACGGCATCTACGGCACCGGTC
TTCAGGCGAAATCCGGTCACTATTCGCTGGAATGTGACTGGTCGCAGGCGGTTTGGGGCCACGGCGGGTCAATCTTTGAC
TCCGACAAGATGTTCTCGGGCAATGATGCCGCGGGCATTGAAGGGCTGGAGTGGTACATGAACCTGCTGGCAAATGCGCC
AGCGAACTCCGTCGCCGCAACGTGGGATGGCCAGTGGCAGATGGGGGCCTCAGGCCAGATCGCGCTCTGCCAGTCGTGGG
CGGAATTCTTCCCCGGCTGGAATGCGGATGATTCCGCTGTGAAAGGTCTGTGGGAGATGACGACACCTCTCAAAGGTCCA
TCGACCCTGCGTGGTCGCGATGCAGTTGGCTTTGGTGAGATTCCAAACTGGGGCCATCAGGGTGGATCCTCGATCGCCCT
GTCGCGCTATTCCAGCAACATAGACGCTGCGTGGTTGTTCCTGCAGTGGGCCTGTTCCAAGGACATCATGACACGCTGCA
CGCTTGCGGGCGGTTTTGCCCCGATGCGCACATCGTCCTACAACGACCCGCGTATTCTGGAGCGTAAGAACCTGGAAGGG
TCAGGCACCACCCGCCACCTTGGCACGGTGCTCGAGACGATCAACAACTATATGGCGTCCGAGCCGGACATGGCGATCTG
GGCCGGTCTTGCGAACAATGAAATCCCGACCGAACTGGGCAAATTGCTCACCGGTCAGGACTATGATGGCAATCCAAAAG
CCTGCATGGATCAGATCGCGAAACTGGTGGACCAACAGGTCGCAGAAGCAGAGCTGCGCTAA

Upstream 100 bases:

>100_bases
GAGCTTCAGGACCCACGACAAGCAGCGCTTCATCATAGACAGCGCCAATGACTTCACGAACAGACGCATCTCGAAACGGG
ATTTTCTGCGCAAACTGGGC

Downstream 100 bases:

>100_bases
GCCTCTCACCCGTGACACGCGCCGTCGCCTTTCGGGGCGGCGGCGTGCAAGTTGAATACATCAAGGCAGCCGGAGGCATG
TCTTGGCAAGGAACCAAGTG

Product: ABC transporter, substrate-binding protein, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 473; Mature: 472

Protein sequence:

>473_residues
MAGVGMSAFAAGSLGGFRSFGNMAMADAHGETPEDVANFLREAGKPFAGTTIRYTSESTPPTVVLNQLKSEFTELTGINV
EIEIVPLEQVLAKATQDVQGQLGTYDLYYLDQAWTATFSRDTIDPREYYADKPDLAMPGFDFDDFSEPLVEGISLYQDKW
IGLPFDIPIFTLMYRKDILEKHGIAVPQTYEDFTQAVELITAAEQENGIYGTGLQAKSGHYSLECDWSQAVWGHGGSIFD
SDKMFSGNDAAGIEGLEWYMNLLANAPANSVAATWDGQWQMGASGQIALCQSWAEFFPGWNADDSAVKGLWEMTTPLKGP
STLRGRDAVGFGEIPNWGHQGGSSIALSRYSSNIDAAWLFLQWACSKDIMTRCTLAGGFAPMRTSSYNDPRILERKNLEG
SGTTRHLGTVLETINNYMASEPDMAIWAGLANNEIPTELGKLLTGQDYDGNPKACMDQIAKLVDQQVAEAELR

Sequences:

>Translated_473_residues
MAGVGMSAFAAGSLGGFRSFGNMAMADAHGETPEDVANFLREAGKPFAGTTIRYTSESTPPTVVLNQLKSEFTELTGINV
EIEIVPLEQVLAKATQDVQGQLGTYDLYYLDQAWTATFSRDTIDPREYYADKPDLAMPGFDFDDFSEPLVEGISLYQDKW
IGLPFDIPIFTLMYRKDILEKHGIAVPQTYEDFTQAVELITAAEQENGIYGTGLQAKSGHYSLECDWSQAVWGHGGSIFD
SDKMFSGNDAAGIEGLEWYMNLLANAPANSVAATWDGQWQMGASGQIALCQSWAEFFPGWNADDSAVKGLWEMTTPLKGP
STLRGRDAVGFGEIPNWGHQGGSSIALSRYSSNIDAAWLFLQWACSKDIMTRCTLAGGFAPMRTSSYNDPRILERKNLEG
SGTTRHLGTVLETINNYMASEPDMAIWAGLANNEIPTELGKLLTGQDYDGNPKACMDQIAKLVDQQVAEAELR
>Mature_472_residues
AGVGMSAFAAGSLGGFRSFGNMAMADAHGETPEDVANFLREAGKPFAGTTIRYTSESTPPTVVLNQLKSEFTELTGINVE
IEIVPLEQVLAKATQDVQGQLGTYDLYYLDQAWTATFSRDTIDPREYYADKPDLAMPGFDFDDFSEPLVEGISLYQDKWI
GLPFDIPIFTLMYRKDILEKHGIAVPQTYEDFTQAVELITAAEQENGIYGTGLQAKSGHYSLECDWSQAVWGHGGSIFDS
DKMFSGNDAAGIEGLEWYMNLLANAPANSVAATWDGQWQMGASGQIALCQSWAEFFPGWNADDSAVKGLWEMTTPLKGPS
TLRGRDAVGFGEIPNWGHQGGSSIALSRYSSNIDAAWLFLQWACSKDIMTRCTLAGGFAPMRTSSYNDPRILERKNLEGS
GTTRHLGTVLETINNYMASEPDMAIWAGLANNEIPTELGKLLTGQDYDGNPKACMDQIAKLVDQQVAEAELR

Specific function: Probably part of the binding-protein-dependent transport system y4oPQRS. This system probably transports a sugar-like molecule [H]

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 51739; Mature: 51608

Theoretical pI: Translated: 4.16; Mature: 4.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGVGMSAFAAGSLGGFRSFGNMAMADAHGETPEDVANFLREAGKPFAGTTIRYTSESTP
CCCCCCHHHHHCCCHHHHHHCCEEEECCCCCCHHHHHHHHHHCCCCCCCCEEEECCCCCC
PTVVLNQLKSEFTELTGINVEIEIVPLEQVLAKATQDVQGQLGTYDLYYLDQAWTATFSR
HHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHCCCCCCEEEEEECCHHHHCCCC
DTIDPREYYADKPDLAMPGFDFDDFSEPLVEGISLYQDKWIGLPFDIPIFTLMYRKDILE
CCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
KHGIAVPQTYEDFTQAVELITAAEQENGIYGTGLQAKSGHYSLECDWSQAVWGHGGSIFD
HCCCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCEEEEECHHHHHHCCCCCCCC
SDKMFSGNDAAGIEGLEWYMNLLANAPANSVAATWDGQWQMGASGQIALCQSWAEFFPGW
CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCEEECCCCCHHHHHHHHHHCCCC
NADDSAVKGLWEMTTPLKGPSTLRGRDAVGFGEIPNWGHQGGSSIALSRYSSNIDAAWLF
CCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHCCCCCHHHHH
LQWACSKDIMTRCTLAGGFAPMRTSSYNDPRILERKNLEGSGTTRHLGTVLETINNYMAS
HHHHHCHHHHHHHHHHCCCCCCCCCCCCCCCHHECCCCCCCCCHHHHHHHHHHHHHHHCC
EPDMAIWAGLANNEIPTELGKLLTGQDYDGNPKACMDQIAKLVDQQVAEAELR
CCCCEEEECCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AGVGMSAFAAGSLGGFRSFGNMAMADAHGETPEDVANFLREAGKPFAGTTIRYTSESTP
CCCCCHHHHHCCCHHHHHHCCEEEECCCCCCHHHHHHHHHHCCCCCCCCEEEECCCCCC
PTVVLNQLKSEFTELTGINVEIEIVPLEQVLAKATQDVQGQLGTYDLYYLDQAWTATFSR
HHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHCCCCCCEEEEEECCHHHHCCCC
DTIDPREYYADKPDLAMPGFDFDDFSEPLVEGISLYQDKWIGLPFDIPIFTLMYRKDILE
CCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
KHGIAVPQTYEDFTQAVELITAAEQENGIYGTGLQAKSGHYSLECDWSQAVWGHGGSIFD
HCCCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCEEEEECHHHHHHCCCCCCCC
SDKMFSGNDAAGIEGLEWYMNLLANAPANSVAATWDGQWQMGASGQIALCQSWAEFFPGW
CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCEEECCCCCHHHHHHHHHHCCCC
NADDSAVKGLWEMTTPLKGPSTLRGRDAVGFGEIPNWGHQGGSSIALSRYSSNIDAAWLF
CCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHCCCCCHHHHH
LQWACSKDIMTRCTLAGGFAPMRTSSYNDPRILERKNLEGSGTTRHLGTVLETINNYMAS
HHHHHCHHHHHHHHHHCCCCCCCCCCCCCCCHHECCCCCCCCCHHHHHHHHHHHHHHHCC
EPDMAIWAGLANNEIPTELGKLLTGQDYDGNPKACMDQIAKLVDQQVAEAELR
CCCCEEEECCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]