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The map label for this gene is yfdV [C]

Identifier: 110680634

GI number: 110680634

Start: 3339922

End: 3340857

Strand: Direct

Name: yfdV [C]

Synonym: RD1_3470

Alternate gene names: 110680634

Gene position: 3339922-3340857 (Clockwise)

Preceding gene: 110680633

Following gene: 110680638

Centisome position: 80.81

GC content: 58.97

Gene sequence:

>936_bases
ATGCAAACCCTTCTTGATGTCATCCTGCCCGTCTTTCTCGTAATCGGGTTCGGGTATGTGGCTGTGTGGAAGGGGCTTTT
CCCGATCTCAGGCATTGATGGGGTCATGCGCTTTACCCAAGGTTTCGCGATCCCCTGCCTGCTGTTCAAGGCCATCGCGG
AAATTGATCTGGGCAGTTCGTTTGATCCCGGTCTGCTGGTCAGTTTCTATGCCGGGGCGACCACATGCTTTTTCGCGGGG
ATGACCGGTGCGCGCCTGTTGTTCAAACGCGACTGGGAAGACTGTGTGGCCATCGGCTTTTGCTGTCTTTTTTCAAATTC
GGTGCTGCTGGGCCTGCCGATCACGGAGCGCGCTTACGGGGCCGAAGCGCTCACCGGAAACTTTGCCATTGTCGCGCTGC
ATTCGCCCTTTTGCTACGGCCTTGGCATCACCGTGATGGAGATCACCCGCAACCGGGGTAAATCCCCGCTGCTGATGGCC
CGTTCAGTGGGGCGGGCGATGTTTCGCAACGGGCTGGTCATCGGGATTGCGCTGGGGTTTTTGGTCAATGTCACGGGGAT
GCCGATCCCCAGTGTGGTCAATGACGCGCTGTCACTGATCATTCAGGCGGCGTTGCCTGCGGCCCTTTTCGCCTTGGGCG
GTGTGTTGATACAATACAAACCCGAGGGCGATCTGCGTGCCATTGCCATGGTTTGTGTCATTGCTCTGATCCTGCACCCG
GCGCTGATGTGGGGGTTTGGTACCACGCTTTCCGTGCCTCCGGATGCGTTCCGCTCGGGCGTGCTGACGGCGGCCATGGC
GCCCGGGTTCAATGCCTATATCTTTGCCAATATGTACGGACGCGCCCGACGGATCGCAGCATCATCCGTGCTGCTGGCGA
CGCTTGGGTCAATCCTGACCGTCTGGGTCTGGTTGATGCTGTTGCAGGGCGTCTGA

Upstream 100 bases:

>100_bases
GGCCTATGATGGCTTGCGGCTGACCTACCCCACGACCTGAGCCTCACCCTCTTTTACGCCCCCCTCGCCGTGAAGATACG
CAGCGGCACAACGAGGCACC

Downstream 100 bases:

>100_bases
GGCGCGCATCTGCGCAAAAAGCTGCCCCGGTGCATGTGGCGGGGCGCGCAGGCCGGCAAGGCGCATCATATGCCACGCCA
AGACCTGATTGCTGCTGAGG

Product: auxin efflux carrier family protein

Products: NA

Alternate protein names: Auxin Efflux Carrier Family Protein; Permease; Malonate Transporter; AEC Family Transporter; MdcF Malonate Transporter; Transporter AEC Family; Membrane Transport Family Protein; Transmembrane Permease Protein; Membrane Transport Family; Malonate Transporter MdcF AEC Family Protein

Number of amino acids: Translated: 311; Mature: 311

Protein sequence:

>311_residues
MQTLLDVILPVFLVIGFGYVAVWKGLFPISGIDGVMRFTQGFAIPCLLFKAIAEIDLGSSFDPGLLVSFYAGATTCFFAG
MTGARLLFKRDWEDCVAIGFCCLFSNSVLLGLPITERAYGAEALTGNFAIVALHSPFCYGLGITVMEITRNRGKSPLLMA
RSVGRAMFRNGLVIGIALGFLVNVTGMPIPSVVNDALSLIIQAALPAALFALGGVLIQYKPEGDLRAIAMVCVIALILHP
ALMWGFGTTLSVPPDAFRSGVLTAAMAPGFNAYIFANMYGRARRIAASSVLLATLGSILTVWVWLMLLQGV

Sequences:

>Translated_311_residues
MQTLLDVILPVFLVIGFGYVAVWKGLFPISGIDGVMRFTQGFAIPCLLFKAIAEIDLGSSFDPGLLVSFYAGATTCFFAG
MTGARLLFKRDWEDCVAIGFCCLFSNSVLLGLPITERAYGAEALTGNFAIVALHSPFCYGLGITVMEITRNRGKSPLLMA
RSVGRAMFRNGLVIGIALGFLVNVTGMPIPSVVNDALSLIIQAALPAALFALGGVLIQYKPEGDLRAIAMVCVIALILHP
ALMWGFGTTLSVPPDAFRSGVLTAAMAPGFNAYIFANMYGRARRIAASSVLLATLGSILTVWVWLMLLQGV
>Mature_311_residues
MQTLLDVILPVFLVIGFGYVAVWKGLFPISGIDGVMRFTQGFAIPCLLFKAIAEIDLGSSFDPGLLVSFYAGATTCFFAG
MTGARLLFKRDWEDCVAIGFCCLFSNSVLLGLPITERAYGAEALTGNFAIVALHSPFCYGLGITVMEITRNRGKSPLLMA
RSVGRAMFRNGLVIGIALGFLVNVTGMPIPSVVNDALSLIIQAALPAALFALGGVLIQYKPEGDLRAIAMVCVIALILHP
ALMWGFGTTLSVPPDAFRSGVLTAAMAPGFNAYIFANMYGRARRIAASSVLLATLGSILTVWVWLMLLQGV

Specific function: Unknown

COG id: COG0679

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Integral membrane protein (Potential) [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33130; Mature: 33130

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTLLDVILPVFLVIGFGYVAVWKGLFPISGIDGVMRFTQGFAIPCLLFKAIAEIDLGSS
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCC
FDPGLLVSFYAGATTCFFAGMTGARLLFKRDWEDCVAIGFCCLFSNSVLLGLPITERAYG
CCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHCCCEEEECCCHHHHCC
AEALTGNFAIVALHSPFCYGLGITVMEITRNRGKSPLLMARSVGRAMFRNGLVIGIALGF
CCEECCCEEEEEECCCHHHHHCHHHEEEHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHH
LVNVTGMPIPSVVNDALSLIIQAALPAALFALGGVLIQYKPEGDLRAIAMVCVIALILHP
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHH
ALMWGFGTTLSVPPDAFRSGVLTAAMAPGFNAYIFANMYGRARRIAASSVLLATLGSILT
HHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHH
VWVWLMLLQGV
HHHHHHHHHCC
>Mature Secondary Structure
MQTLLDVILPVFLVIGFGYVAVWKGLFPISGIDGVMRFTQGFAIPCLLFKAIAEIDLGSS
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCC
FDPGLLVSFYAGATTCFFAGMTGARLLFKRDWEDCVAIGFCCLFSNSVLLGLPITERAYG
CCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHCCCEEEECCCHHHHCC
AEALTGNFAIVALHSPFCYGLGITVMEITRNRGKSPLLMARSVGRAMFRNGLVIGIALGF
CCEECCCEEEEEECCCHHHHHCHHHEEEHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHH
LVNVTGMPIPSVVNDALSLIIQAALPAALFALGGVLIQYKPEGDLRAIAMVCVIALILHP
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHH
ALMWGFGTTLSVPPDAFRSGVLTAAMAPGFNAYIFANMYGRARRIAASSVLLATLGSILT
HHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHH
VWVWLMLLQGV
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA