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The map label for this gene is 110680486

Identifier: 110680486

GI number: 110680486

Start: 3168343

End: 3168897

Strand: Direct

Name: 110680486

Synonym: RD1_3306

Alternate gene names: NA

Gene position: 3168343-3168897 (Clockwise)

Preceding gene: 110680485

Following gene: 110680487

Centisome position: 76.66

GC content: 58.2

Gene sequence:

>555_bases
GTGGCCACACAATATGAAAACCTCAACGACACCCTGACGAAATTCATCGCGGCTCAGCATCTCTTTTTCTGCGCCACGGC
AGGCCCCGGTGGGCGGGTGAATGTGTCCCCGAAAGGGATGGACAGCCTGCGTGTTCTGGGACCAGACCGTATCATCTGGC
GCAACCTCACCGGGTCGGGGAATGAGACCGCAGGGCATCTTGCCCAGATCAACCGCATGACCCTGATGTGGTGCGGGTTC
GAGAAAAAACCCTTGATCCTGAGGGTTTACGGAACGGCGCGCACGCTGCACCCGCGCGATGGGGATTTTGACGCATTGAA
CAGCGAATTTCCACCATCCATCGCCGCGCGCCAGATCTACGATGTCACGATTGACATGGTACAGACCAGTTGCGGCTACG
CGGTGCCGTTCATGGACTACGCAGGCGAGCGCGATGTGTTGGCCAATTGGGCAGAGGATAAGGGCCCGGACGGCATCGCG
GAATACTGGGAAACGCGCAATCAAACCACGATTGACAACGATCCCACCTTCATTCTCTCCCCCGTCAAAGGGTAG

Upstream 100 bases:

>100_bases
GGGTTTTGCAAAAAACCGCGCCACATGCGATGAAACTCAGGCGATCGACGCAAACCCGAACCCCGGGCCGGCACTTTCTG
ATCATGACACGGAGAACCCT

Downstream 100 bases:

>100_bases
GCCGTTTCAAACGCGGCGGGCGTGACACGATCGCACGCCACTTTTGACGTTATATGCTTGCCGCCCCGCGCGCGGACCAT
TACTTGTTAATGCATGAATG

Product: pyridoxamine 5'-phosphate oxidase family protein, putative

Products: NA

Alternate protein names: Pyridoxamine 5-Phosphate Oxidase Family Protein; Pyridoxamine 5-Phosphate Oxidase-Like Protein; Signal Transduction Histidine Kinase; Pyridoxamine-Phosphate Oxidase; Pyridoxamine 5-Phosphate Oxidase Family

Number of amino acids: Translated: 184; Mature: 183

Protein sequence:

>184_residues
MATQYENLNDTLTKFIAAQHLFFCATAGPGGRVNVSPKGMDSLRVLGPDRIIWRNLTGSGNETAGHLAQINRMTLMWCGF
EKKPLILRVYGTARTLHPRDGDFDALNSEFPPSIAARQIYDVTIDMVQTSCGYAVPFMDYAGERDVLANWAEDKGPDGIA
EYWETRNQTTIDNDPTFILSPVKG

Sequences:

>Translated_184_residues
MATQYENLNDTLTKFIAAQHLFFCATAGPGGRVNVSPKGMDSLRVLGPDRIIWRNLTGSGNETAGHLAQINRMTLMWCGF
EKKPLILRVYGTARTLHPRDGDFDALNSEFPPSIAARQIYDVTIDMVQTSCGYAVPFMDYAGERDVLANWAEDKGPDGIA
EYWETRNQTTIDNDPTFILSPVKG
>Mature_183_residues
ATQYENLNDTLTKFIAAQHLFFCATAGPGGRVNVSPKGMDSLRVLGPDRIIWRNLTGSGNETAGHLAQINRMTLMWCGFE
KKPLILRVYGTARTLHPRDGDFDALNSEFPPSIAARQIYDVTIDMVQTSCGYAVPFMDYAGERDVLANWAEDKGPDGIAE
YWETRNQTTIDNDPTFILSPVKG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20434; Mature: 20303

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATQYENLNDTLTKFIAAQHLFFCATAGPGGRVNVSPKGMDSLRVLGPDRIIWRNLTGSG
CCCCCCCHHHHHHHHHHHHHEEEEEECCCCCEEEECCCCCCCEEEECCCEEEEEECCCCC
NETAGHLAQINRMTLMWCGFEKKPLILRVYGTARTLHPRDGDFDALNSEFPPSIAARQIY
CCCHHHHHHHCCEEEEEECCCCCCEEEEEECCCEEECCCCCCCCCCCCCCCCCHHHHHHH
DVTIDMVQTSCGYAVPFMDYAGERDVLANWAEDKGPDGIAEYWETRNQTTIDNDPTFILS
HHHHEEHHCCCCCCCCHHHCCCCCHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCEEEE
PVKG
CCCC
>Mature Secondary Structure 
ATQYENLNDTLTKFIAAQHLFFCATAGPGGRVNVSPKGMDSLRVLGPDRIIWRNLTGSG
CCCCCCHHHHHHHHHHHHHEEEEEECCCCCEEEECCCCCCCEEEECCCEEEEEECCCCC
NETAGHLAQINRMTLMWCGFEKKPLILRVYGTARTLHPRDGDFDALNSEFPPSIAARQIY
CCCHHHHHHHCCEEEEEECCCCCCEEEEEECCCEEECCCCCCCCCCCCCCCCCHHHHHHH
DVTIDMVQTSCGYAVPFMDYAGERDVLANWAEDKGPDGIAEYWETRNQTTIDNDPTFILS
HHHHEEHHCCCCCCCCHHHCCCCCHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCEEEE
PVKG
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA