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The map label for this gene is 110680345

Identifier: 110680345

GI number: 110680345

Start: 3030806

End: 3032023

Strand: Direct

Name: 110680345

Synonym: RD1_3158

Alternate gene names: NA

Gene position: 3030806-3032023 (Clockwise)

Preceding gene: 110680344

Following gene: 110680346

Centisome position: 73.33

GC content: 65.6

Gene sequence:

>1218_bases
ATGCCAAAATCGCCTGACGCGTTCCGCACGATCTCAGAGGTCGCAGACTGGTTGGGCGTTCAGGCCCATGTTCTGCGGTT
CTGGGAAAGCAAATTCAGCCAGGTCAAACCGGTCAAACGTGCGGGCGGCAGGCGCTATTACAGACCCGCGGACATGCTGC
TGCTTGGTGGGATCAAACAATTGCTGCATGAGGATGGCCTGACCATCAAGGGCGCGCAGAAAATGCTGCGCGAACACGGG
GTGTCCTACGTCGCGGATATGTCGCAACCGCTGGATGATCTGACCATTGCCGTGATCGAAGGGAATGCCGCCGGACCCGA
AGACGACACGGTCGATCTGACAGAGCCAGCGATCGAAAGTGCAGCCCACGAAGAAGCTGCTGCGCCGCAAGAAGCCGAGG
CGTTTGATGCCCCGCCTGCTGCGCAAACTGCCGAAGTATTTGATGACCCCCCCGCCGCGCCCGACGCGACGCCGCTGCCG
GAACCAGAGGTGCGTGATGTGACACCGCCTGAGCCGCAGGATATGGCCGGCCTGTCGCAACCCGATCTGCCGCCCGAGAC
GCCCGAAGCCATCCCGCCTGAGGCGTCTGACCCTGAACCCGCGGTGCAGCACGCCGAACCAGAGGCCGCACCTGCCCCCG
CTCCTGATCCGGCACCAACGATGCAGCCTGCCGAACCGGTTGAAGCCCCCGCACCGCAGGATCCCACGCCTGCGCCGATG
GAAACCATCCCGGAGGCAGCGACACCGCAAAGCGACGCGGTCAACGCGGAACCCGAGCAGCCAACAGAGGAGCCGCAGGA
AACAGCGCCGGCCATGCCGAGCTTTCGCGCACGCCCACGTACAGCCGAAGCCACGCCGCCCGCCACGCCAGAACCGAGCG
CTGTTGCACCAACCCCGGCGGCTGCGGAAAATGTACCACCCACAGACCCCACCCCCGCCGCGCCCCAGGACAGCGGCGAA
GCCGAACCGGCGCCTGCCGACACCACCGCGCCCGCGCCCACGCCTGAGGCCCCGGTGGCGCGTAAACCGAAGGTCGTCGA
TCTGCCGCCCATACCGCTGCTTTCGCAGATCGCGGTCGACCCCTCAGCGCTGGCCGCGCTGACGAAGGTCAAGGCGCTGA
CCCCGGCACAGGCGCAAGAGATCAAACCGCTTGTCGCGCGACTGACCCGATTGCACGCGAGCATGGCAAACCCGCTCAAA
GACATGCACAAAGACTAA

Upstream 100 bases:

>100_bases
ACCGGCGAAGAGGTTCCGATCAACCCGCGCCGCGTGCTAACGTTCAGGCCCTCTCACCTGATGAAAGACCGCGTAGCCAA
CGGCAACAAGTCCTGACAAC

Downstream 100 bases:

>100_bases
GCGGTGGTATTTCTCTCTTGCCACGACGCCCAGATCGGGTATGTAGCGCGTCAAGTCGGGCTATGGCGCAGCCTGGTAGC
GCGTCCGTCTGGGGGACGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 405; Mature: 404

Protein sequence:

>405_residues
MPKSPDAFRTISEVADWLGVQAHVLRFWESKFSQVKPVKRAGGRRYYRPADMLLLGGIKQLLHEDGLTIKGAQKMLREHG
VSYVADMSQPLDDLTIAVIEGNAAGPEDDTVDLTEPAIESAAHEEAAAPQEAEAFDAPPAAQTAEVFDDPPAAPDATPLP
EPEVRDVTPPEPQDMAGLSQPDLPPETPEAIPPEASDPEPAVQHAEPEAAPAPAPDPAPTMQPAEPVEAPAPQDPTPAPM
ETIPEAATPQSDAVNAEPEQPTEEPQETAPAMPSFRARPRTAEATPPATPEPSAVAPTPAAAENVPPTDPTPAAPQDSGE
AEPAPADTTAPAPTPEAPVARKPKVVDLPPIPLLSQIAVDPSALAALTKVKALTPAQAQEIKPLVARLTRLHASMANPLK
DMHKD

Sequences:

>Translated_405_residues
MPKSPDAFRTISEVADWLGVQAHVLRFWESKFSQVKPVKRAGGRRYYRPADMLLLGGIKQLLHEDGLTIKGAQKMLREHG
VSYVADMSQPLDDLTIAVIEGNAAGPEDDTVDLTEPAIESAAHEEAAAPQEAEAFDAPPAAQTAEVFDDPPAAPDATPLP
EPEVRDVTPPEPQDMAGLSQPDLPPETPEAIPPEASDPEPAVQHAEPEAAPAPAPDPAPTMQPAEPVEAPAPQDPTPAPM
ETIPEAATPQSDAVNAEPEQPTEEPQETAPAMPSFRARPRTAEATPPATPEPSAVAPTPAAAENVPPTDPTPAAPQDSGE
AEPAPADTTAPAPTPEAPVARKPKVVDLPPIPLLSQIAVDPSALAALTKVKALTPAQAQEIKPLVARLTRLHASMANPLK
DMHKD
>Mature_404_residues
PKSPDAFRTISEVADWLGVQAHVLRFWESKFSQVKPVKRAGGRRYYRPADMLLLGGIKQLLHEDGLTIKGAQKMLREHGV
SYVADMSQPLDDLTIAVIEGNAAGPEDDTVDLTEPAIESAAHEEAAAPQEAEAFDAPPAAQTAEVFDDPPAAPDATPLPE
PEVRDVTPPEPQDMAGLSQPDLPPETPEAIPPEASDPEPAVQHAEPEAAPAPAPDPAPTMQPAEPVEAPAPQDPTPAPME
TIPEAATPQSDAVNAEPEQPTEEPQETAPAMPSFRARPRTAEATPPATPEPSAVAPTPAAAENVPPTDPTPAAPQDSGEA
EPAPADTTAPAPTPEAPVARKPKVVDLPPIPLLSQIAVDPSALAALTKVKALTPAQAQEIKPLVARLTRLHASMANPLKD
MHKD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH merR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR000551 [H]

Pfam domain/function: PF00376 MerR [H]

EC number: NA

Molecular weight: Translated: 42476; Mature: 42344

Theoretical pI: Translated: 4.07; Mature: 4.07

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKSPDAFRTISEVADWLGVQAHVLRFWESKFSQVKPVKRAGGRRYYRPADMLLLGGIKQ
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCHHHHHHHHHHHH
LLHEDGLTIKGAQKMLREHGVSYVADMSQPLDDLTIAVIEGNAAGPEDDTVDLTEPAIES
HHHHCCCEEHHHHHHHHHHCHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHH
AAHEEAAAPQEAEAFDAPPAAQTAEVFDDPPAAPDATPLPEPEVRDVTPPEPQDMAGLSQ
HHHHHHCCCCHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCC
PDLPPETPEAIPPEASDPEPAVQHAEPEAAPAPAPDPAPTMQPAEPVEAPAPQDPTPAPM
CCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
ETIPEAATPQSDAVNAEPEQPTEEPQETAPAMPSFRARPRTAEATPPATPEPSAVAPTPA
HHCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AAENVPPTDPTPAAPQDSGEAEPAPADTTAPAPTPEAPVARKPKVVDLPPIPLLSQIAVD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHCC
PSALAALTKVKALTPAQAQEIKPLVARLTRLHASMANPLKDMHKD
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PKSPDAFRTISEVADWLGVQAHVLRFWESKFSQVKPVKRAGGRRYYRPADMLLLGGIKQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCHHHHHHHHHHHH
LLHEDGLTIKGAQKMLREHGVSYVADMSQPLDDLTIAVIEGNAAGPEDDTVDLTEPAIES
HHHHCCCEEHHHHHHHHHHCHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHH
AAHEEAAAPQEAEAFDAPPAAQTAEVFDDPPAAPDATPLPEPEVRDVTPPEPQDMAGLSQ
HHHHHHCCCCHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCC
PDLPPETPEAIPPEASDPEPAVQHAEPEAAPAPAPDPAPTMQPAEPVEAPAPQDPTPAPM
CCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
ETIPEAATPQSDAVNAEPEQPTEEPQETAPAMPSFRARPRTAEATPPATPEPSAVAPTPA
HHCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AAENVPPTDPTPAAPQDSGEAEPAPADTTAPAPTPEAPVARKPKVVDLPPIPLLSQIAVD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHCC
PSALAALTKVKALTPAQAQEIKPLVARLTRLHASMANPLKDMHKD
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1961742 [H]