| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is plsX
Identifier: 110680342
GI number: 110680342
Start: 3028360
End: 3029433
Strand: Direct
Name: plsX
Synonym: RD1_3155
Alternate gene names: 110680342
Gene position: 3028360-3029433 (Clockwise)
Preceding gene: 110680341
Following gene: 110680343
Centisome position: 73.27
GC content: 60.89
Gene sequence:
>1074_bases ATGACGGCGCAGACCGGTCAGACGCAATCACAGGACGCGCGCATCATCATCTCGGTAGATGCGATGGGGGGGGATGAAGG TCCCGCCGCCGTTATTGCGGGCTGCGATGTGTCAGCGCGCAAGAATCCGGATGTGTTTTTCATCCTGCACGGGCCAGAGG CGGAGATCACGGCACTCGTGAACCGCCGCAAATCATTGCAAGGCCGATGCGAAGTCCGCGATGCAACCGGTGTCGTCACG ATGGACGACAAGCCCAGTCAGGTTGTGCGCAACAGCAAGGGCACCTCCATGTGGTCCGCCATAGAGGCCGTGCGCGATGG CAGTGCGTCAGTCGCCGTTTCCTGCGGGAATACCGGCGCGCTCATGGCGCTGTCCATGATCCGGCTGCGCAAACTGCCCG GTGTGAACCGTCCCGCGATTGCCGTGCTTTATCCTTCTTCCAATCAACAGGGCTTCAATGTGCTGCTTGACGTGGGTGCG GACATCAAGGCGGATGCCGATGATTTGCTGCGCTATGCGCTGATGGGTATGTCCTATGCGCGCAACGGTCTGGACCTGCC CCGCCCCCGGGTTGGATTGCTCAATGTGGGAACAGAGGAACACAAGGGCCGCACCGAACTCAAGGAAGCCTTTGACCTGA TCAAGGAACAGCAGGAGCCGGCGGGATTTGATTTTGTCGGCTTCGTGGAAGGCGGCGATATTTCGGGTGATCTGTGTGAT GTGATCGTGACAGACGGTTTCACCGGCAACGTCGCGATCAAGACCGGCGAAGGCACGGCGAACCTTGTGGGCAACCGTCT GCGCGAGGCTTTCCGCTACACGCCCCTGTCGCGACTGGCCTCGCTGCTGGCCTATCCGTCGCTGCGCCGTCTGAAGAAAA AGATCGACCCCCGCCGTGTGAATGGCGGCGTTTTTCTGGGGCTGAACGGCACGGTCGTGAAATCCCACGGGGCCGCCGAT GCTACCGGCGTGTCATCCGCAATCAAACTCGCGGCACAACTGGCGCATATCCAGTTCACCGACAAACTTGCGGCCCGCGT TGCCGGTCTGCCCGCAGAGGAGAAAACCCAGTGA
Upstream 100 bases:
>100_bases GAAGTCGTGGCGCTGACAGAAGAGATTGATCTGGAAGACGACGCAGCCTAAACCTGTGCCTTAACGAATACGGGCAGCAG GGTTTGGGGGCAGTCGCTTT
Downstream 100 bases:
>100_bases CGCTGCGTGCCGTTGTAACGGGTGTCGGACATTACCTGCCCGACCGTATCGTGCCCAATTCCGAGTTCGAAAAGACGCTG GATACCAATGACGAATGGAT
Product: putative glycerol-3-phosphate acyltransferase PlsX
Products: NA
Alternate protein names: Acyl-ACP phosphotransacylase; Acyl-[acyl-carrier-protein]--phosphate acyltransferase; Phosphate-acyl-ACP acyltransferase
Number of amino acids: Translated: 357; Mature: 356
Protein sequence:
>357_residues MTAQTGQTQSQDARIIISVDAMGGDEGPAAVIAGCDVSARKNPDVFFILHGPEAEITALVNRRKSLQGRCEVRDATGVVT MDDKPSQVVRNSKGTSMWSAIEAVRDGSASVAVSCGNTGALMALSMIRLRKLPGVNRPAIAVLYPSSNQQGFNVLLDVGA DIKADADDLLRYALMGMSYARNGLDLPRPRVGLLNVGTEEHKGRTELKEAFDLIKEQQEPAGFDFVGFVEGGDISGDLCD VIVTDGFTGNVAIKTGEGTANLVGNRLREAFRYTPLSRLASLLAYPSLRRLKKKIDPRRVNGGVFLGLNGTVVKSHGAAD ATGVSSAIKLAAQLAHIQFTDKLAARVAGLPAEEKTQ
Sequences:
>Translated_357_residues MTAQTGQTQSQDARIIISVDAMGGDEGPAAVIAGCDVSARKNPDVFFILHGPEAEITALVNRRKSLQGRCEVRDATGVVT MDDKPSQVVRNSKGTSMWSAIEAVRDGSASVAVSCGNTGALMALSMIRLRKLPGVNRPAIAVLYPSSNQQGFNVLLDVGA DIKADADDLLRYALMGMSYARNGLDLPRPRVGLLNVGTEEHKGRTELKEAFDLIKEQQEPAGFDFVGFVEGGDISGDLCD VIVTDGFTGNVAIKTGEGTANLVGNRLREAFRYTPLSRLASLLAYPSLRRLKKKIDPRRVNGGVFLGLNGTVVKSHGAAD ATGVSSAIKLAAQLAHIQFTDKLAARVAGLPAEEKTQ >Mature_356_residues TAQTGQTQSQDARIIISVDAMGGDEGPAAVIAGCDVSARKNPDVFFILHGPEAEITALVNRRKSLQGRCEVRDATGVVTM DDKPSQVVRNSKGTSMWSAIEAVRDGSASVAVSCGNTGALMALSMIRLRKLPGVNRPAIAVLYPSSNQQGFNVLLDVGAD IKADADDLLRYALMGMSYARNGLDLPRPRVGLLNVGTEEHKGRTELKEAFDLIKEQQEPAGFDFVGFVEGGDISGDLCDV IVTDGFTGNVAIKTGEGTANLVGNRLREAFRYTPLSRLASLLAYPSLRRLKKKIDPRRVNGGVFLGLNGTVVKSHGAADA TGVSSAIKLAAQLAHIQFTDKLAARVAGLPAEEKTQ
Specific function: Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
COG id: COG0416
COG function: function code I; Fatty acid/phospholipid biosynthesis enzyme
Gene ontology:
Cell location: Cytoplasm. Note=Associated with the membrane possibly through plsY (By similarity)
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the plsX family
Homologues:
Organism=Escherichia coli, GI87081831, Length=338, Percent_Identity=35.7988165680473, Blast_Score=209, Evalue=2e-55,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PLSX_ROSDO (Q164D0)
Other databases:
- EMBL: CP000362 - RefSeq: YP_683349.1 - ProteinModelPortal: Q164D0 - SMR: Q164D0 - STRING: Q164D0 - GeneID: 4198623 - GenomeReviews: CP000362_GR - KEGG: rde:RD1_3155 - NMPDR: fig|375451.6.peg.2930 - eggNOG: COG0416 - HOGENOM: HBG288268 - OMA: EGFSGNI - PhylomeDB: Q164D0 - ProtClustDB: PRK05331 - BioCyc: RDEN375451:RD1_3155-MONOMER - GO: GO:0005737 - HAMAP: MF_00019 - InterPro: IPR003664 - InterPro: IPR012281 - PIRSF: PIRSF002465 - TIGRFAMs: TIGR00182
Pfam domain/function: PF02504 FA_synthesis
EC number: NA
Molecular weight: Translated: 37891; Mature: 37759
Theoretical pI: Translated: 8.32; Mature: 8.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAQTGQTQSQDARIIISVDAMGGDEGPAAVIAGCDVSARKNPDVFFILHGPEAEITALV CCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCCCEEEEEECCCHHHHHHH NRRKSLQGRCEVRDATGVVTMDDKPSQVVRNSKGTSMWSAIEAVRDGSASVAVSCGNTGA HHHHCCCCCEEEECCCEEEEECCCHHHHHHCCCCCHHHHHHHHHHCCCCEEEEEECCCHH LMALSMIRLRKLPGVNRPAIAVLYPSSNQQGFNVLLDVGADIKADADDLLRYALMGMSYA HHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHH RNGLDLPRPRVGLLNVGTEEHKGRTELKEAFDLIKEQQEPAGFDFVGFVEGGDISGDLCD CCCCCCCCCCEEEEECCCHHCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCEEE VIVTDGFTGNVAIKTGEGTANLVGNRLREAFRYTPLSRLASLLAYPSLRRLKKKIDPRRV EEEECCCCCCEEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHCCCEEE NGGVFLGLNGTVVKSHGAADATGVSSAIKLAAQLAHIQFTDKLAARVAGLPAEEKTQ CCCEEEECCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure TAQTGQTQSQDARIIISVDAMGGDEGPAAVIAGCDVSARKNPDVFFILHGPEAEITALV CCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCCCEEEEEECCCHHHHHHH NRRKSLQGRCEVRDATGVVTMDDKPSQVVRNSKGTSMWSAIEAVRDGSASVAVSCGNTGA HHHHCCCCCEEEECCCEEEEECCCHHHHHHCCCCCHHHHHHHHHHCCCCEEEEEECCCHH LMALSMIRLRKLPGVNRPAIAVLYPSSNQQGFNVLLDVGADIKADADDLLRYALMGMSYA HHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHH RNGLDLPRPRVGLLNVGTEEHKGRTELKEAFDLIKEQQEPAGFDFVGFVEGGDISGDLCD CCCCCCCCCCEEEEECCCHHCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCEEE VIVTDGFTGNVAIKTGEGTANLVGNRLREAFRYTPLSRLASLLAYPSLRRLKKKIDPRRV EEEECCCCCCEEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHCCCEEE NGGVFLGLNGTVVKSHGAADATGVSSAIKLAAQLAHIQFTDKLAARVAGLPAEEKTQ CCCEEEECCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA