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The map label for this gene is 110680306

Identifier: 110680306

GI number: 110680306

Start: 2995504

End: 2996631

Strand: Direct

Name: 110680306

Synonym: RD1_3119

Alternate gene names: NA

Gene position: 2995504-2996631 (Clockwise)

Preceding gene: 110680303

Following gene: 110680307

Centisome position: 72.48

GC content: 57.62

Gene sequence:

>1128_bases
GTGGTCAGACTCGACAGATACATGCTGTCGCAACTTCTGGTTCTATTTGGCTTCTTCGCGCTGGTGCTGGTTGCCATTCT
CTGGATCAATCGCGGCGTTTCCCTGTTTGACGAATTGATCAGCGACGGGCAATCCGCCCTTGTTTTCCTCGAATTTACCG
CGTTGGGCTTGCCGAAACTGATCACCACGGTGCTGCCCATCGCGACATTTGCCGCCGCGGTTTACGTCACCAACCGCATG
AACAACGAAAGCGAGTTGACGGTGTTGCAGGCCACGGGTTCCGGCCCTGTGCGGCTGGCCCGCCCGGTTCTTGTTTTCGG
GCTGATCGTGTTTTTGATGGCGTCGATGTTGCACCATGTTCTGATGCCGCTTGCCCAGCAGCAACTGGGGCACAGGCAAA
ACGAGATCGCTCAGAACGCGACCTCCCGGTTGTTGACGGAGGGACGGTTTCTGCACCCTTCGGAAGGCGTGACGTTTTAC
ACGCAGGAGATTGATGATGACGGTGTTTTGCGCGACGTTTTCCTGTCTGACCGGCGCAGTGTCGAGGAAGGCGTCATCTA
CACCGCCGCACATGCCTATCTGATCCGTGACGACGAGCGCACGTCGTTGATCATGGTGGATGGGCTTGCACAACGGTTGA
CGACGGCGACCGATCGGCTGGCCACAGCGAACTTCCGCGATTTTTCCTTTGATATCTCGGCGCTGGTGCAAAATGATGTC
AGTCAGCGGCTTGATCCCGACAAAATGACCACCTTTCAGCTGCTCACCCCGTGGGATGAATTGTCACGCGAAACAGGGCG
CAGCATCGGCAAGATCACCCAGAGCTTTCATGCGCGCATTGCGGATCCGCTGTTCTGTATCGTCGCCGCGTTGATCGGAT
TTTCAACCCTGATGATCGGCGGTTTTTCACGTTTCGGCGTCTGGCGCGAAGTCGGCGTTGCCTTTGTCCTGCTGGTTGCG
ATTGATGGTCTGCGCAGCACCCTGCAAAGCCCTGTGCGGCGGGACCCTGAGCTTTGGCCTCTGCTGTATCTGCCGACCTT
CATCAGCGCGTTGCTCGTGATTGCCATGCTCTGGGTTGCTGCGCGGCCAAGGGGATCCTTCTTCGGCCTGCTGCGGAGAA
GTGGATGA

Upstream 100 bases:

>100_bases
TAGCGCGCCTGATGCGCAAAGACCAGATAGCAGTTTTACCACAGCGCGCTTTGGTCTAACGTGGCCGCAAGAATGAGAAA
CGGCGTAAGAGGGAATCGGA

Downstream 100 bases:

>100_bases
TCCTGCATTTGTATTTCGCGCGCCGCTTTGCATCCTGGCTGCTGATCGCCTTCATCGCGCTTTCCGCGCTGATCGCTTTG
GTCGATCTGGTAGATCAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 375; Mature: 375

Protein sequence:

>375_residues
MVRLDRYMLSQLLVLFGFFALVLVAILWINRGVSLFDELISDGQSALVFLEFTALGLPKLITTVLPIATFAAAVYVTNRM
NNESELTVLQATGSGPVRLARPVLVFGLIVFLMASMLHHVLMPLAQQQLGHRQNEIAQNATSRLLTEGRFLHPSEGVTFY
TQEIDDDGVLRDVFLSDRRSVEEGVIYTAAHAYLIRDDERTSLIMVDGLAQRLTTATDRLATANFRDFSFDISALVQNDV
SQRLDPDKMTTFQLLTPWDELSRETGRSIGKITQSFHARIADPLFCIVAALIGFSTLMIGGFSRFGVWREVGVAFVLLVA
IDGLRSTLQSPVRRDPELWPLLYLPTFISALLVIAMLWVAARPRGSFFGLLRRSG

Sequences:

>Translated_375_residues
MVRLDRYMLSQLLVLFGFFALVLVAILWINRGVSLFDELISDGQSALVFLEFTALGLPKLITTVLPIATFAAAVYVTNRM
NNESELTVLQATGSGPVRLARPVLVFGLIVFLMASMLHHVLMPLAQQQLGHRQNEIAQNATSRLLTEGRFLHPSEGVTFY
TQEIDDDGVLRDVFLSDRRSVEEGVIYTAAHAYLIRDDERTSLIMVDGLAQRLTTATDRLATANFRDFSFDISALVQNDV
SQRLDPDKMTTFQLLTPWDELSRETGRSIGKITQSFHARIADPLFCIVAALIGFSTLMIGGFSRFGVWREVGVAFVLLVA
IDGLRSTLQSPVRRDPELWPLLYLPTFISALLVIAMLWVAARPRGSFFGLLRRSG
>Mature_375_residues
MVRLDRYMLSQLLVLFGFFALVLVAILWINRGVSLFDELISDGQSALVFLEFTALGLPKLITTVLPIATFAAAVYVTNRM
NNESELTVLQATGSGPVRLARPVLVFGLIVFLMASMLHHVLMPLAQQQLGHRQNEIAQNATSRLLTEGRFLHPSEGVTFY
TQEIDDDGVLRDVFLSDRRSVEEGVIYTAAHAYLIRDDERTSLIMVDGLAQRLTTATDRLATANFRDFSFDISALVQNDV
SQRLDPDKMTTFQLLTPWDELSRETGRSIGKITQSFHARIADPLFCIVAALIGFSTLMIGGFSRFGVWREVGVAFVLLVA
IDGLRSTLQSPVRRDPELWPLLYLPTFISALLVIAMLWVAARPRGSFFGLLRRSG

Specific function: Unknown

COG id: COG0795

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005495 [H]

Pfam domain/function: PF03739 YjgP_YjgQ [H]

EC number: NA

Molecular weight: Translated: 41811; Mature: 41811

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRLDRYMLSQLLVLFGFFALVLVAILWINRGVSLFDELISDGQSALVFLEFTALGLPKL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEEEHHHHCHHHH
ITTVLPIATFAAAVYVTNRMNNESELTVLQATGSGPVRLARPVLVFGLIVFLMASMLHHV
HHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LMPLAQQQLGHRQNEIAQNATSRLLTEGRFLHPSEGVTFYTQEIDDDGVLRDVFLSDRRS
HHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHH
VEEGVIYTAAHAYLIRDDERTSLIMVDGLAQRLTTATDRLATANFRDFSFDISALVQNDV
HHHCEEEEEHEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
SQRLDPDKMTTFQLLTPWDELSRETGRSIGKITQSFHARIADPLFCIVAALIGFSTLMIG
HHCCCCCHHCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC
GFSRFGVWREVGVAFVLLVAIDGLRSTLQSPVRRDPELWPLLYLPTFISALLVIAMLWVA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
ARPRGSFFGLLRRSG
CCCCCHHHHHHHCCC
>Mature Secondary Structure
MVRLDRYMLSQLLVLFGFFALVLVAILWINRGVSLFDELISDGQSALVFLEFTALGLPKL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEEEHHHHCHHHH
ITTVLPIATFAAAVYVTNRMNNESELTVLQATGSGPVRLARPVLVFGLIVFLMASMLHHV
HHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LMPLAQQQLGHRQNEIAQNATSRLLTEGRFLHPSEGVTFYTQEIDDDGVLRDVFLSDRRS
HHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHH
VEEGVIYTAAHAYLIRDDERTSLIMVDGLAQRLTTATDRLATANFRDFSFDISALVQNDV
HHHCEEEEEHEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
SQRLDPDKMTTFQLLTPWDELSRETGRSIGKITQSFHARIADPLFCIVAALIGFSTLMIG
HHCCCCCHHCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC
GFSRFGVWREVGVAFVLLVAIDGLRSTLQSPVRRDPELWPLLYLPTFISALLVIAMLWVA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
ARPRGSFFGLLRRSG
CCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]