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The map label for this gene is 110680287

Identifier: 110680287

GI number: 110680287

Start: 2974675

End: 2975583

Strand: Reverse

Name: 110680287

Synonym: RD1_3098

Alternate gene names: NA

Gene position: 2975583-2974675 (Counterclockwise)

Preceding gene: 110680288

Following gene: 110680286

Centisome position: 71.99

GC content: 63.04

Gene sequence:

>909_bases
GTGCCGGCCCTCGTGGTGGTCGCGGTGATCATTGCCGTCTGGACGCTGGCCGTCGTGCCGATGAACGCGCATCTGACCGC
AGATCAGGCGCAGCGCGACGGGCTGGTCATGACACCCGAGGCCCCGGCGGAACGGCAGGAATACTCGGGTCTCGTGCTGG
CGTTCAAGAACCCGCAGATCATCCCGCTGACCTACACGCAGACACGCCCGCGGCTGCCCTCGCCGCATCAGGTCACCGCC
GAGCTTTATGACAGTGTCTTTACCAAGAAGATCACCTCCAAACGCAGTCTTGTCTATCATGGCTGGGTCACGCTGTCGGC
GACGCTGTTGGGGTTTGCCATCGGGACGGGTCTGGGCATTCTGCTGGCGATTGGCATCGTGTATAGCCGCACGATGGACA
AATCCGTGATGCCCTGGGCCATCACGTCGCAGACCATTCCCATACTGGCGCTGGCCCCGATGATCATCGTCATGCTGGGC
GCCATTGGCATTCAGGGGCTTTTGCCCAAATCGGTCATATCCGCATACCTGAGCTTTTTCCCGGTGGTCGTGGGCATGGT
CAAGGGGCTGCGCAGCCCCGATGCGATGCAGCTTGATCTGTTGCGCACCTATAGCGCCAGCCCGTCGCAGGGGTTCTGGA
AGCTGCGCCTGCCCGCTTCTGTGCCCTATCTGTTTGCATCGCTCAAGATTGGTATCTCCGCCGCGTTGGTCGGTGCCATC
GTGGGCGAATTGCCGACCGGCGCGCGGGCGGGCTTTGGCGCGCGCATGTTGGTGGGGGATCAATACGGCCAGCCGATGGT
GACGTGGGCGGCTCTGTTTGCAGCGGCGATTACGGCGGCGGCACTGGTCGCCATTCTGACGCTGATCGAGCGGCAGACGC
TCAGGCGCATGGGGATGGAGGCAGCATGA

Upstream 100 bases:

>100_bases
CCGCTGGACATTCGCGACAGCGTGGAGTTCATCGAGATTGCCCATCGCGTGCGCGACGGGCTGCGCGCGGGTCACATTGA
TGAATAGACTGGCCGGTATC

Downstream 100 bases:

>100_bases
TGGCCTACGTACTGGCGTTGATCGTCTGGGGTTTTGGGTGGTGGCTCAATATCAGGCTGTCGCATTCCCCGCGGGCGGAC
ACCCGACTGTTCAGCTTGCT

Product: ABC transporter, permease protein, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 301

Protein sequence:

>302_residues
MPALVVVAVIIAVWTLAVVPMNAHLTADQAQRDGLVMTPEAPAERQEYSGLVLAFKNPQIIPLTYTQTRPRLPSPHQVTA
ELYDSVFTKKITSKRSLVYHGWVTLSATLLGFAIGTGLGILLAIGIVYSRTMDKSVMPWAITSQTIPILALAPMIIVMLG
AIGIQGLLPKSVISAYLSFFPVVVGMVKGLRSPDAMQLDLLRTYSASPSQGFWKLRLPASVPYLFASLKIGISAALVGAI
VGELPTGARAGFGARMLVGDQYGQPMVTWAALFAAAITAAALVAILTLIERQTLRRMGMEAA

Sequences:

>Translated_302_residues
MPALVVVAVIIAVWTLAVVPMNAHLTADQAQRDGLVMTPEAPAERQEYSGLVLAFKNPQIIPLTYTQTRPRLPSPHQVTA
ELYDSVFTKKITSKRSLVYHGWVTLSATLLGFAIGTGLGILLAIGIVYSRTMDKSVMPWAITSQTIPILALAPMIIVMLG
AIGIQGLLPKSVISAYLSFFPVVVGMVKGLRSPDAMQLDLLRTYSASPSQGFWKLRLPASVPYLFASLKIGISAALVGAI
VGELPTGARAGFGARMLVGDQYGQPMVTWAALFAAAITAAALVAILTLIERQTLRRMGMEAA
>Mature_301_residues
PALVVVAVIIAVWTLAVVPMNAHLTADQAQRDGLVMTPEAPAERQEYSGLVLAFKNPQIIPLTYTQTRPRLPSPHQVTAE
LYDSVFTKKITSKRSLVYHGWVTLSATLLGFAIGTGLGILLAIGIVYSRTMDKSVMPWAITSQTIPILALAPMIIVMLGA
IGIQGLLPKSVISAYLSFFPVVVGMVKGLRSPDAMQLDLLRTYSASPSQGFWKLRLPASVPYLFASLKIGISAALVGAIV
GELPTGARAGFGARMLVGDQYGQPMVTWAALFAAAITAAALVAILTLIERQTLRRMGMEAA

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0600

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32258; Mature: 32127

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPALVVVAVIIAVWTLAVVPMNAHLTADQAQRDGLVMTPEAPAERQEYSGLVLAFKNPQI
CCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCEEECCCCCCCHHHCCCEEEEECCCEE
IPLTYTQTRPRLPSPHQVTAELYDSVFTKKITSKRSLVYHGWVTLSATLLGFAIGTGLGI
EEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHH
LLAIGIVYSRTMDKSVMPWAITSQTIPILALAPMIIVMLGAIGIQGLLPKSVISAYLSFF
HHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
PVVVGMVKGLRSPDAMQLDLLRTYSASPSQGFWKLRLPASVPYLFASLKIGISAALVGAI
HHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHH
VGELPTGARAGFGARMLVGDQYGQPMVTWAALFAAAITAAALVAILTLIERQTLRRMGME
HHCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
AA
CC
>Mature Secondary Structure 
PALVVVAVIIAVWTLAVVPMNAHLTADQAQRDGLVMTPEAPAERQEYSGLVLAFKNPQI
CHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCEEECCCCCCCHHHCCCEEEEECCCEE
IPLTYTQTRPRLPSPHQVTAELYDSVFTKKITSKRSLVYHGWVTLSATLLGFAIGTGLGI
EEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHH
LLAIGIVYSRTMDKSVMPWAITSQTIPILALAPMIIVMLGAIGIQGLLPKSVISAYLSFF
HHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
PVVVGMVKGLRSPDAMQLDLLRTYSASPSQGFWKLRLPASVPYLFASLKIGISAALVGAI
HHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHH
VGELPTGARAGFGARMLVGDQYGQPMVTWAALFAAAITAAALVAILTLIERQTLRRMGME
HHCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
AA
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]