BacMap

Definition	Roseobacter denitrificans OCh 114, complete genome.
Accession	NC_008209
Length	4,133,097

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The map label for this gene is rbsA

Identifier: 110680269

GI number: 110680269

Start: 2950667

End: 2952202

Strand: Reverse

Name: rbsA

Synonym: RD1_3079

Alternate gene names: 110680269

Gene position: 2952202-2950667 (Counterclockwise)

Preceding gene: 110680270

Following gene: 110680268

Centisome position: 71.43

GC content: 59.24

Gene sequence:

>1536_bases
ATGTCAAAGCACACCCTATCTGCAGATGTGCCCGTGGTATCCATGGATGCCATCACCAAGACGTTTCCGGGGGTCAAAGC
GCTGGATCAGGTCAGGCTTGATCTTTACCCCGGGCAGGTCACGGCCCTTGTGGGCGAAAACGGGGCGGGGAAATCCACGA
CCGTCAAAATCCTGACCGGAATTTATCAGCCGGACGGGGGCACCATCCGGATCGCGGGCGCGCCGGTTATTCTGAACACT
CCGAATGACGCCTCCGCCGCAGGGATCACGGCCATCCATCAGGAAACGGTGTTGTTTGATGAGCTTACGGTTGCTGAAAA
CATCTTCATCGGTCACGCGCCGCGCACAAAATGGGGTTTGATCGACAAGGCAGCGATGCACCGCAAGGCGCGCGGACTGC
TGGACGAGATCGGTGCGCCTTTCGACACGGGTGCCTATCTGCGCGAACTGGGCATTGCGAATAAACATCTGGTGGCCATC
GCCCGCGCCTTGTCGGTGGATGCCCGCGTTGTGATCATGGACGAGCCGACGGCAGCGCTGTCCCACAAGGAAATCGAAGA
GCTTTATGAACTGGTCGAAACCCTGAAAGCGCAGGGAAAGGCGATCCTGTTCATCAGCCATAAATTCGACGAGATTTTCC
GCATTGCTGACCGCTACACGGTGTTTCGCGACGGGGCCTTTGTCAGCGATGGCCTGATCAGTGACATTGATCAGGACGCG
CTGGTTAAAATGATGGTGGGGCGGGCGGTCGATCACATCTTTCCCGAACGTCAGGCAGCGCTTGGCGAGGAGGTGCTGCA
AGTTGCAGGCTATGCGCATCCCACGGAATTTGCCGGTATCGGGTTCACGCTGAAACGCGGTGAAATCCTCGGGTTTTACG
GGCTTGTCGGGGCAGGGCGCTCCGAATTGATGCAAGCGCTCTTTGGCATCACCCGGCCCAGCAAAGGGGTGACAAAGATC
AATGGGGACATTCGCGTGATCCGCTCTCCTGCGGATGCCGTAAACAACGGGATTGTCTATGTCCCCGAGGATCGCGGCAA
GCAGGGTGTGGTGATCGGGTTGCCGATTTTTCAGAACATCACCTTGCCCTCACTTGGCCGCACGTCGCAATCGGGCTTTT
TGCGCATGGCCGAAGAATTCAAACTGGCGCGCGACTATGCCGAGCGGCTGGATCTGCGCGCCGCCGCCCTTGATCAGGAT
GTGGGCAACCTGTCGGGGGGCAACCAGCAAAAAGTCGTCATTGCCAAGTGGCTGGCCACGCAGCCGCAGGTCATCATTCT
GGATGAACCGACCAAGGGCATCGACATCGGCTCCAAGGCGGCGGTGCACGAGTTCATGGCCGAGCTTGCAGGCCAAGGCC
TCGCGGTCATCATGGTCAGTTCCGAGATACCCGAAGTCATCGGCATGTCCGATCGTGTGATCGTGATGCGCGAGGGTCGC
ATCGCCGCCGAGGTGCAGGGCGAAGATCTGACGCCAGAAACCCTTGTCCGCCACGCCGCGGGCATTGCACCCGCTCCAGA
AAGCATCCCCGCATGA

Upstream 100 bases:

>100_bases
CCCTTCGTCTATGACGCCAGCAACATCGAGCAGTTCAAGTCGATTTTCTAATTTGCGCCGGACCAGCCCCTTTTATCAAC
GCCCCCAAAAGAGTGTCGTC

Downstream 100 bases:

>100_bases
GCCGTTTCATCCCTGTGCGCGAAACCATTCTTGCCGCGGCGATTGTCGTGTTGCTGATCCTGATCGCCTCGCGGTTTTCA
GGTTTTGTCGCCCCCTCCAA

Product: ribose transport ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 511; Mature: 510

Protein sequence:

>511_residues
MSKHTLSADVPVVSMDAITKTFPGVKALDQVRLDLYPGQVTALVGENGAGKSTTVKILTGIYQPDGGTIRIAGAPVILNT
PNDASAAGITAIHQETVLFDELTVAENIFIGHAPRTKWGLIDKAAMHRKARGLLDEIGAPFDTGAYLRELGIANKHLVAI
ARALSVDARVVIMDEPTAALSHKEIEELYELVETLKAQGKAILFISHKFDEIFRIADRYTVFRDGAFVSDGLISDIDQDA
LVKMMVGRAVDHIFPERQAALGEEVLQVAGYAHPTEFAGIGFTLKRGEILGFYGLVGAGRSELMQALFGITRPSKGVTKI
NGDIRVIRSPADAVNNGIVYVPEDRGKQGVVIGLPIFQNITLPSLGRTSQSGFLRMAEEFKLARDYAERLDLRAAALDQD
VGNLSGGNQQKVVIAKWLATQPQVIILDEPTKGIDIGSKAAVHEFMAELAGQGLAVIMVSSEIPEVIGMSDRVIVMREGR
IAAEVQGEDLTPETLVRHAAGIAPAPESIPA

Sequences:

>Translated_511_residues
MSKHTLSADVPVVSMDAITKTFPGVKALDQVRLDLYPGQVTALVGENGAGKSTTVKILTGIYQPDGGTIRIAGAPVILNT
PNDASAAGITAIHQETVLFDELTVAENIFIGHAPRTKWGLIDKAAMHRKARGLLDEIGAPFDTGAYLRELGIANKHLVAI
ARALSVDARVVIMDEPTAALSHKEIEELYELVETLKAQGKAILFISHKFDEIFRIADRYTVFRDGAFVSDGLISDIDQDA
LVKMMVGRAVDHIFPERQAALGEEVLQVAGYAHPTEFAGIGFTLKRGEILGFYGLVGAGRSELMQALFGITRPSKGVTKI
NGDIRVIRSPADAVNNGIVYVPEDRGKQGVVIGLPIFQNITLPSLGRTSQSGFLRMAEEFKLARDYAERLDLRAAALDQD
VGNLSGGNQQKVVIAKWLATQPQVIILDEPTKGIDIGSKAAVHEFMAELAGQGLAVIMVSSEIPEVIGMSDRVIVMREGR
IAAEVQGEDLTPETLVRHAAGIAPAPESIPA
>Mature_510_residues
SKHTLSADVPVVSMDAITKTFPGVKALDQVRLDLYPGQVTALVGENGAGKSTTVKILTGIYQPDGGTIRIAGAPVILNTP
NDASAAGITAIHQETVLFDELTVAENIFIGHAPRTKWGLIDKAAMHRKARGLLDEIGAPFDTGAYLRELGIANKHLVAIA
RALSVDARVVIMDEPTAALSHKEIEELYELVETLKAQGKAILFISHKFDEIFRIADRYTVFRDGAFVSDGLISDIDQDAL
VKMMVGRAVDHIFPERQAALGEEVLQVAGYAHPTEFAGIGFTLKRGEILGFYGLVGAGRSELMQALFGITRPSKGVTKIN
GDIRVIRSPADAVNNGIVYVPEDRGKQGVVIGLPIFQNITLPSLGRTSQSGFLRMAEEFKLARDYAERLDLRAAALDQDV
GNLSGGNQQKVVIAKWLATQPQVIILDEPTKGIDIGSKAAVHEFMAELAGQGLAVIMVSSEIPEVIGMSDRVIVMREGRI
AAEVQGEDLTPETLVRHAAGIAPAPESIPA

Specific function: Part of the ABC transporter complex RbsABCD involved in ribose import. Responsible for energy coupling to the transport system

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains

Homologues:

Organism=Homo sapiens, GI31657092, Length=222, Percent_Identity=28.8288288288288, Blast_Score=98, Evalue=2e-20,
Organism=Homo sapiens, GI105990541, Length=268, Percent_Identity=26.4925373134328, Blast_Score=97, Evalue=5e-20,
Organism=Homo sapiens, GI45446740, Length=222, Percent_Identity=28.8288288288288, Blast_Score=97, Evalue=5e-20,
Organism=Homo sapiens, GI47078218, Length=222, Percent_Identity=28.8288288288288, Blast_Score=97, Evalue=5e-20,
Organism=Homo sapiens, GI150417984, Length=218, Percent_Identity=33.9449541284404, Blast_Score=96, Evalue=1e-19,
Organism=Homo sapiens, GI21536376, Length=222, Percent_Identity=32.4324324324324, Blast_Score=92, Evalue=9e-19,
Organism=Homo sapiens, GI9961252, Length=215, Percent_Identity=34.4186046511628, Blast_Score=92, Evalue=9e-19,
Organism=Homo sapiens, GI9961250, Length=215, Percent_Identity=34.4186046511628, Blast_Score=92, Evalue=1e-18,
Organism=Homo sapiens, GI4505771, Length=215, Percent_Identity=34.4186046511628, Blast_Score=92, Evalue=1e-18,
Organism=Homo sapiens, GI27881501, Length=216, Percent_Identity=27.3148148148148, Blast_Score=90, Evalue=5e-18,
Organism=Homo sapiens, GI30795238, Length=216, Percent_Identity=27.3148148148148, Blast_Score=90, Evalue=5e-18,
Organism=Homo sapiens, GI116734710, Length=205, Percent_Identity=27.8048780487805, Blast_Score=86, Evalue=7e-17,
Organism=Homo sapiens, GI9955968, Length=195, Percent_Identity=33.8461538461538, Blast_Score=85, Evalue=2e-16,
Organism=Homo sapiens, GI9955966, Length=195, Percent_Identity=33.8461538461538, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI45243524, Length=195, Percent_Identity=33.8461538461538, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI42741659, Length=222, Percent_Identity=32.4324324324324, Blast_Score=83, Evalue=6e-16,
Organism=Homo sapiens, GI255708477, Length=212, Percent_Identity=30.6603773584906, Blast_Score=81, Evalue=3e-15,
Organism=Homo sapiens, GI9665248, Length=217, Percent_Identity=30.4147465437788, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI73747915, Length=236, Percent_Identity=29.2372881355932, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI21536378, Length=212, Percent_Identity=32.5471698113208, Blast_Score=77, Evalue=4e-14,
Organism=Homo sapiens, GI153792144, Length=212, Percent_Identity=28.3018867924528, Blast_Score=74, Evalue=4e-13,
Organism=Homo sapiens, GI27262624, Length=218, Percent_Identity=28.8990825688073, Blast_Score=73, Evalue=6e-13,
Organism=Homo sapiens, GI27262626, Length=218, Percent_Identity=28.8990825688073, Blast_Score=73, Evalue=6e-13,
Organism=Homo sapiens, GI73747917, Length=164, Percent_Identity=34.1463414634146, Blast_Score=73, Evalue=6e-13,
Organism=Homo sapiens, GI156105685, Length=205, Percent_Identity=30.7317073170732, Blast_Score=73, Evalue=7e-13,
Organism=Homo sapiens, GI9955963, Length=213, Percent_Identity=30.0469483568075, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI27477115, Length=214, Percent_Identity=27.5700934579439, Blast_Score=70, Evalue=7e-12,
Organism=Homo sapiens, GI27436953, Length=203, Percent_Identity=28.0788177339901, Blast_Score=69, Evalue=1e-11,
Organism=Homo sapiens, GI171184400, Length=202, Percent_Identity=30.1980198019802, Blast_Score=68, Evalue=3e-11,
Organism=Homo sapiens, GI148612844, Length=237, Percent_Identity=28.2700421940928, Blast_Score=67, Evalue=3e-11,
Organism=Escherichia coli, GI1790190, Length=491, Percent_Identity=43.3808553971487, Blast_Score=424, Evalue=1e-120,
Organism=Escherichia coli, GI1790525, Length=503, Percent_Identity=41.351888667992, Blast_Score=379, Evalue=1e-106,
Organism=Escherichia coli, GI1788210, Length=485, Percent_Identity=39.5876288659794, Blast_Score=362, Evalue=1e-101,
Organism=Escherichia coli, GI1788472, Length=506, Percent_Identity=36.9565217391304, Blast_Score=360, Evalue=1e-100,
Organism=Escherichia coli, GI1789991, Length=501, Percent_Identity=39.9201596806387, Blast_Score=350, Evalue=8e-98,
Organism=Escherichia coli, GI48995001, Length=486, Percent_Identity=37.4485596707819, Blast_Score=343, Evalue=1e-95,
Organism=Escherichia coli, GI1788897, Length=486, Percent_Identity=37.6543209876543, Blast_Score=325, Evalue=6e-90,
Organism=Escherichia coli, GI1787792, Length=505, Percent_Identity=35.049504950495, Blast_Score=288, Evalue=6e-79,
Organism=Escherichia coli, GI1789864, Length=252, Percent_Identity=29.3650793650794, Blast_Score=115, Evalue=5e-27,
Organism=Escherichia coli, GI1787758, Length=245, Percent_Identity=31.8367346938775, Blast_Score=102, Evalue=7e-23,
Organism=Escherichia coli, GI1788506, Length=511, Percent_Identity=26.027397260274, Blast_Score=96, Evalue=5e-21,
Organism=Escherichia coli, GI1787712, Length=214, Percent_Identity=27.5700934579439, Blast_Score=94, Evalue=2e-20,
Organism=Escherichia coli, GI1786253, Length=201, Percent_Identity=31.8407960199005, Blast_Score=94, Evalue=2e-20,
Organism=Escherichia coli, GI87081791, Length=228, Percent_Identity=28.5087719298246, Blast_Score=94, Evalue=2e-20,
Organism=Escherichia coli, GI145693107, Length=531, Percent_Identity=25.6120527306968, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1788761, Length=214, Percent_Identity=29.4392523364486, Blast_Score=91, Evalue=2e-19,
Organism=Escherichia coli, GI1788225, Length=239, Percent_Identity=28.4518828451883, Blast_Score=90, Evalue=3e-19,
Organism=Escherichia coli, GI1787105, Length=230, Percent_Identity=30.4347826086957, Blast_Score=89, Evalue=6e-19,
Organism=Escherichia coli, GI48994943, Length=530, Percent_Identity=22.6415094339623, Blast_Score=86, Evalue=7e-18,
Organism=Escherichia coli, GI1788450, Length=233, Percent_Identity=28.3261802575107, Blast_Score=85, Evalue=1e-17,
Organism=Escherichia coli, GI1787029, Length=225, Percent_Identity=27.1111111111111, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1786398, Length=232, Percent_Identity=27.5862068965517, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1788165, Length=233, Percent_Identity=27.4678111587983, Blast_Score=84, Evalue=3e-17,
Organism=Escherichia coli, GI87081782, Length=241, Percent_Identity=28.6307053941909, Blast_Score=83, Evalue=4e-17,
Organism=Escherichia coli, GI1787089, Length=224, Percent_Identity=27.6785714285714, Blast_Score=83, Evalue=4e-17,
Organism=Escherichia coli, GI1789593, Length=228, Percent_Identity=26.7543859649123, Blast_Score=82, Evalue=6e-17,
Organism=Escherichia coli, GI1789891, Length=227, Percent_Identity=28.1938325991189, Blast_Score=82, Evalue=9e-17,
Organism=Escherichia coli, GI1790739, Length=229, Percent_Identity=24.4541484716157, Blast_Score=79, Evalue=5e-16,
Organism=Escherichia coli, GI1787370, Length=230, Percent_Identity=27.3913043478261, Blast_Score=79, Evalue=6e-16,
Organism=Escherichia coli, GI87081709, Length=264, Percent_Identity=23.4848484848485, Blast_Score=78, Evalue=2e-15,
Organism=Escherichia coli, GI1786872, Length=223, Percent_Identity=25.5605381165919, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1787759, Length=250, Percent_Identity=29.6, Blast_Score=77, Evalue=3e-15,
Organism=Escherichia coli, GI1789032, Length=233, Percent_Identity=26.1802575107296, Blast_Score=77, Evalue=4e-15,
Organism=Escherichia coli, GI1787500, Length=223, Percent_Identity=26.457399103139, Blast_Score=76, Evalue=5e-15,
Organism=Escherichia coli, GI48994997, Length=217, Percent_Identity=26.7281105990783, Blast_Score=76, Evalue=5e-15,
Organism=Escherichia coli, GI87082268, Length=225, Percent_Identity=23.1111111111111, Blast_Score=76, Evalue=6e-15,
Organism=Escherichia coli, GI1790544, Length=243, Percent_Identity=28.8065843621399, Blast_Score=76, Evalue=6e-15,
Organism=Escherichia coli, GI1787143, Length=231, Percent_Identity=30.7359307359307, Blast_Score=75, Evalue=9e-15,
Organism=Escherichia coli, GI1789962, Length=227, Percent_Identity=29.9559471365639, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI1789672, Length=237, Percent_Identity=23.6286919831224, Blast_Score=72, Evalue=6e-14,
Organism=Escherichia coli, GI1786319, Length=221, Percent_Identity=26.6968325791855, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI87081834, Length=209, Percent_Identity=28.2296650717703, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1786345, Length=251, Percent_Identity=25.4980079681275, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1789873, Length=217, Percent_Identity=27.6497695852535, Blast_Score=70, Evalue=4e-13,
Organism=Escherichia coli, GI1787164, Length=231, Percent_Identity=25.974025974026, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI1786698, Length=204, Percent_Identity=25.4901960784314, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI87082267, Length=219, Percent_Identity=25.5707762557078, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI1788540, Length=197, Percent_Identity=30.4568527918782, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI1788002, Length=246, Percent_Identity=26.4227642276423, Blast_Score=66, Evalue=4e-12,
Organism=Escherichia coli, GI1786563, Length=215, Percent_Identity=23.2558139534884, Blast_Score=66, Evalue=7e-12,
Organism=Escherichia coli, GI1786654, Length=206, Percent_Identity=26.2135922330097, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1790467, Length=214, Percent_Identity=23.8317757009346, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1786981, Length=211, Percent_Identity=30.8056872037915, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1786703, Length=216, Percent_Identity=27.3148148148148, Blast_Score=64, Evalue=3e-11,
Organism=Escherichia coli, GI1787112, Length=231, Percent_Identity=25.974025974026, Blast_Score=63, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17567265, Length=210, Percent_Identity=33.8095238095238, Blast_Score=96, Evalue=4e-20,
Organism=Caenorhabditis elegans, GI115533608, Length=211, Percent_Identity=31.2796208530806, Blast_Score=94, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17567269, Length=209, Percent_Identity=33.0143540669856, Blast_Score=92, Evalue=5e-19,
Organism=Caenorhabditis elegans, GI115535101, Length=262, Percent_Identity=30.9160305343511, Blast_Score=91, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI71983523, Length=260, Percent_Identity=29.6153846153846, Blast_Score=89, Evalue=6e-18,
Organism=Caenorhabditis elegans, GI71983510, Length=260, Percent_Identity=29.6153846153846, Blast_Score=89, Evalue=7e-18,
Organism=Caenorhabditis elegans, GI71983516, Length=260, Percent_Identity=29.6153846153846, Blast_Score=89, Evalue=7e-18,
Organism=Caenorhabditis elegans, GI17569143, Length=225, Percent_Identity=32, Blast_Score=86, Evalue=6e-17,
Organism=Caenorhabditis elegans, GI17569145, Length=230, Percent_Identity=31.7391304347826, Blast_Score=85, Evalue=8e-17,
Organism=Caenorhabditis elegans, GI17541710, Length=212, Percent_Identity=29.7169811320755, Blast_Score=85, Evalue=9e-17,
Organism=Caenorhabditis elegans, GI17565938, Length=235, Percent_Identity=30.6382978723404, Blast_Score=81, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17510237, Length=220, Percent_Identity=27.2727272727273, Blast_Score=79, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI17543740, Length=233, Percent_Identity=28.755364806867, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17565586, Length=207, Percent_Identity=28.0193236714976, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI193202349, Length=210, Percent_Identity=32.3809523809524, Blast_Score=76, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI17558664, Length=225, Percent_Identity=29.3333333333333, Blast_Score=76, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI193209708, Length=225, Percent_Identity=29.7777777777778, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17533971, Length=230, Percent_Identity=27.3913043478261, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI212646699, Length=229, Percent_Identity=29.6943231441048, Blast_Score=72, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI71984940, Length=204, Percent_Identity=30.8823529411765, Blast_Score=72, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI25146777, Length=206, Percent_Identity=30.5825242718447, Blast_Score=72, Evalue=9e-13,
Organism=Caenorhabditis elegans, GI115533592, Length=235, Percent_Identity=29.3617021276596, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI193211015, Length=217, Percent_Identity=29.4930875576037, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI193211017, Length=226, Percent_Identity=28.3185840707965, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI71996809, Length=217, Percent_Identity=29.4930875576037, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17511077, Length=229, Percent_Identity=26.2008733624454, Blast_Score=67, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI115534520, Length=190, Percent_Identity=28.9473684210526, Blast_Score=67, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI71992290, Length=201, Percent_Identity=27.8606965174129, Blast_Score=66, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17551702, Length=205, Percent_Identity=25.8536585365854, Blast_Score=65, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI17551700, Length=205, Percent_Identity=25.8536585365854, Blast_Score=65, Evalue=8e-11,
Organism=Saccharomyces cerevisiae, GI6323959, Length=231, Percent_Identity=30.3030303030303, Blast_Score=71, Evalue=5e-13,
Organism=Saccharomyces cerevisiae, GI6324985, Length=220, Percent_Identity=28.1818181818182, Blast_Score=66, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6322640, Length=232, Percent_Identity=29.3103448275862, Blast_Score=66, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24643674, Length=219, Percent_Identity=29.2237442922374, Blast_Score=89, Evalue=5e-18,
Organism=Drosophila melanogaster, GI281363262, Length=215, Percent_Identity=31.6279069767442, Blast_Score=89, Evalue=6e-18,
Organism=Drosophila melanogaster, GI24653245, Length=215, Percent_Identity=31.6279069767442, Blast_Score=89, Evalue=8e-18,
Organism=Drosophila melanogaster, GI17136662, Length=214, Percent_Identity=32.2429906542056, Blast_Score=89, Evalue=1e-17,
Organism=Drosophila melanogaster, GI221512771, Length=291, Percent_Identity=25.7731958762887, Blast_Score=88, Evalue=1e-17,
Organism=Drosophila melanogaster, GI24666092, Length=243, Percent_Identity=25.9259259259259, Blast_Score=83, Evalue=4e-16,
Organism=Drosophila melanogaster, GI23397593, Length=225, Percent_Identity=31.5555555555556, Blast_Score=83, Evalue=5e-16,
Organism=Drosophila melanogaster, GI24648314, Length=239, Percent_Identity=23.4309623430962, Blast_Score=82, Evalue=8e-16,
Organism=Drosophila melanogaster, GI24659289, Length=212, Percent_Identity=29.2452830188679, Blast_Score=79, Evalue=7e-15,
Organism=Drosophila melanogaster, GI24641565, Length=211, Percent_Identity=30.3317535545024, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI85726357, Length=246, Percent_Identity=28.4552845528455, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI21357907, Length=217, Percent_Identity=27.1889400921659, Blast_Score=69, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RBSA_ROSDO (Q164K3)

Other databases:

- EMBL:   CP000362
- RefSeq:   YP_683276.1
- ProteinModelPortal:   Q164K3
- STRING:   Q164K3
- GeneID:   4198705
- GenomeReviews:   CP000362_GR
- KEGG:   rde:RD1_3079
- NMPDR:   fig|375451.6.peg.2858
- eggNOG:   COG1129
- HOGENOM:   HBG758042
- OMA:   HAFMSEL
- PhylomeDB:   Q164K3
- ProtClustDB:   CLSK864371
- BioCyc:   RDEN375451:RD1_3079-MONOMER
- HAMAP:   MF_01716
- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR015861
- InterPro:   IPR003593
- SMART:   SM00382

Pfam domain/function: PF00005 ABC_tran

EC number: =3.6.3.17

Molecular weight: Translated: 54818; Mature: 54687

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: PS00211 ABC_TRANSPORTER_1; PS50893 ABC_TRANSPORTER_2; PS51254 RBSA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKHTLSADVPVVSMDAITKTFPGVKALDQVRLDLYPGQVTALVGENGAGKSTTVKILTG
CCCCCCCCCCCEEEHHHHHHHCCCHHHHHHHHEEECCCEEEEEECCCCCCCCEEEEEEEE
IYQPDGGTIRIAGAPVILNTPNDASAAGITAIHQETVLFDELTVAENIFIGHAPRTKWGL
EECCCCCEEEEECCEEEEECCCCCCCCCEEHHHHHHHHHHHHHHHHHEEEECCCCCCCCC
IDKAAMHRKARGLLDEIGAPFDTGAYLRELGIANKHLVAIARALSVDARVVIMDEPTAAL
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCHHHHHHHHHHCCCEEEEEEECCCHHH
SHKEIEELYELVETLKAQGKAILFISHKFDEIFRIADRYTVFRDGAFVSDGLISDIDQDA
HHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHEEEECCCEECCCHHHCCCHHH
LVKMMVGRAVDHIFPERQAALGEEVLQVAGYAHPTEFAGIGFTLKRGEILGFYGLVGAGR
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCEEEEEHHHCCCH
SELMQALFGITRPSKGVTKINGDIRVIRSPADAVNNGIVYVPEDRGKQGVVIGLPIFQNI
HHHHHHHHCCCCCCCCCEEECCCEEEEECCHHHHCCCEEEEECCCCCCEEEEEECHHCCC
TLPSLGRTSQSGFLRMAEEFKLARDYAERLDLRAAALDQDVGNLSGGNQQKVVIAKWLAT
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCC
QPQVIILDEPTKGIDIGSKAAVHEFMAELAGQGLAVIMVSSEIPEVIGMSDRVIVMREGR
CCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHCCCCCEEEEECCC
IAAEVQGEDLTPETLVRHAAGIAPAPESIPA
EEEEECCCCCCHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
SKHTLSADVPVVSMDAITKTFPGVKALDQVRLDLYPGQVTALVGENGAGKSTTVKILTG
CCCCCCCCCCEEEHHHHHHHCCCHHHHHHHHEEECCCEEEEEECCCCCCCCEEEEEEEE
IYQPDGGTIRIAGAPVILNTPNDASAAGITAIHQETVLFDELTVAENIFIGHAPRTKWGL
EECCCCCEEEEECCEEEEECCCCCCCCCEEHHHHHHHHHHHHHHHHHEEEECCCCCCCCC
IDKAAMHRKARGLLDEIGAPFDTGAYLRELGIANKHLVAIARALSVDARVVIMDEPTAAL
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCHHHHHHHHHHCCCEEEEEEECCCHHH
SHKEIEELYELVETLKAQGKAILFISHKFDEIFRIADRYTVFRDGAFVSDGLISDIDQDA
HHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHEEEECCCEECCCHHHCCCHHH
LVKMMVGRAVDHIFPERQAALGEEVLQVAGYAHPTEFAGIGFTLKRGEILGFYGLVGAGR
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCEEEEEHHHCCCH
SELMQALFGITRPSKGVTKINGDIRVIRSPADAVNNGIVYVPEDRGKQGVVIGLPIFQNI
HHHHHHHHCCCCCCCCCEEECCCEEEEECCHHHHCCCEEEEECCCCCCEEEEEECHHCCC
TLPSLGRTSQSGFLRMAEEFKLARDYAERLDLRAAALDQDVGNLSGGNQQKVVIAKWLAT
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCC
QPQVIILDEPTKGIDIGSKAAVHEFMAELAGQGLAVIMVSSEIPEVIGMSDRVIVMREGR
CCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHCCCCCEEEEECCC
IAAEVQGEDLTPETLVRHAAGIAPAPESIPA
EEEEECCCCCCHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA