Click here to switch to the map view.

The map label for this gene is 110680220

Identifier: 110680220

GI number: 110680220

Start: 2899534

End: 2899872

Strand: Reverse

Name: 110680220

Synonym: RD1_3026

Alternate gene names: NA

Gene position: 2899872-2899534 (Counterclockwise)

Preceding gene: 110680221

Following gene: 110680219

Centisome position: 70.16

GC content: 60.18

Gene sequence:

>339_bases
ATGAGTATGCCGCGCCTGAACAGACGTTTGCTTTTGGAAACCCCCATTCGCCAAGGTGACAATGCCGGTGGTTTCACAAC
CATATGGCAGCCGTTGGGGTCACTGTGGGCGCAGGTTATTGCGCGCAGTGGACGCGAGGCGACCCAACTGGGCGCACCGG
TGTCGGCGGTGAGCTATCGCATTATCGTGCGGGGTGCCCCGCACAATACGCTCCAGCGCCCAAAGCCGGAACAGCGGTTT
CGCGATGGGGACCGGGTTTTTCTTATTCAGGCGGTGGCGGAAGCCGATGACGATGGCCGCCATCTGACCTGCTTTGCGAC
GGAGGAAACAGCGATATGA

Upstream 100 bases:

>100_bases
ACGAATATCGCAATGAGACCAGTCTGAGCGGGGGGTGCATGCCATTTGGCGTGACAAGTCTGATCGAGCGCTACAAGGTC
GTGCGTCTGGGTGGCTTGAG

Downstream 100 bases:

>100_bases
GTTATGCAGTTTCCGGTCCTTTGCAAAGCGCGATCTACGAAGCGCTGATCAGCGATACCGCGCTCAATGCGTTGGTTGGC
GGTGCCGTCTATGACGCCTT

Product: phage head-tail adaptor, putative

Products: NA

Alternate protein names: Head-Tail Adaptor

Number of amino acids: Translated: 112; Mature: 111

Protein sequence:

>112_residues
MSMPRLNRRLLLETPIRQGDNAGGFTTIWQPLGSLWAQVIARSGREATQLGAPVSAVSYRIIVRGAPHNTLQRPKPEQRF
RDGDRVFLIQAVAEADDDGRHLTCFATEETAI

Sequences:

>Translated_112_residues
MSMPRLNRRLLLETPIRQGDNAGGFTTIWQPLGSLWAQVIARSGREATQLGAPVSAVSYRIIVRGAPHNTLQRPKPEQRF
RDGDRVFLIQAVAEADDDGRHLTCFATEETAI
>Mature_111_residues
SMPRLNRRLLLETPIRQGDNAGGFTTIWQPLGSLWAQVIARSGREATQLGAPVSAVSYRIIVRGAPHNTLQRPKPEQRFR
DGDRVFLIQAVAEADDDGRHLTCFATEETAI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12454; Mature: 12323

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMPRLNRRLLLETPIRQGDNAGGFTTIWQPLGSLWAQVIARSGREATQLGAPVSAVSYR
CCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHEEEE
IIVRGAPHNTLQRPKPEQRFRDGDRVFLIQAVAEADDDGRHLTCFATEETAI
EEEECCCCCCCCCCCCHHHHCCCCEEEEEEEECCCCCCCCEEEEEECCCCCC
>Mature Secondary Structure 
SMPRLNRRLLLETPIRQGDNAGGFTTIWQPLGSLWAQVIARSGREATQLGAPVSAVSYR
CCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHEEEE
IIVRGAPHNTLQRPKPEQRFRDGDRVFLIQAVAEADDDGRHLTCFATEETAI
EEEECCCCCCCCCCCCHHHHCCCCEEEEEEEECCCCCCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA