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The map label for this gene is 110680215

Identifier: 110680215

GI number: 110680215

Start: 2897509

End: 2898171

Strand: Reverse

Name: 110680215

Synonym: RD1_3020

Alternate gene names: NA

Gene position: 2898171-2897509 (Counterclockwise)

Preceding gene: 110680216

Following gene: 110680214

Centisome position: 70.12

GC content: 61.84

Gene sequence:

>663_bases
ATGACAGATGACAATAGCTTTGAGGACCTTGAGGCGGGTGCGGAAGGTCTGAACGATACGTTGGGACAAACAAGCACGCT
GGTCAGCGGTTTCGATGGTGAATTGCGGCGCATGCAAAACGCGCTGGATGCCACAAGCAAGGGACTTGCGACCGTGGAGC
GTGGCATCAGTCGCGGCCTGCGCGGTGCCTTTGACGGTGTCATTCTGGACGGGGTGAAGTTGTCGGATGCCCTGAAGTCC
GTGCGCGACAGTATGGTTCAGACGGCTTACAACGCCGCGATCAAACCCGTGACCAACGGCCTTGGGAGCGCGCTGGCGCA
GGGCGTGGGCGGGCTGGTGCAGGGTGTTTTGCCTTTCGCCAATGGCGCGCCGTTCAGTCAGGGGCGGGTCATGCCCTTTG
CAAATGGCGGAATCGTCAGCAGCACCACGCCTTTCGGAATGCGCGGCGGTATGGGCATCATGGGCGAGGCGGGACCCGAG
GCGATCATGCCTCTGGCGCGCGGCCCTGATGGGAAGCTTGGCGTGCGCGGGGCAGGTGGTGGCGGTGGGCAAACCATCGT
CATGAACATCAGCACGCCGGATGTTCAGAATTTCCAGAGATCTCAGGCGCAGATCGCGGCACAGATGAGTCGTGCTCTGG
GACGTGGTCAGCGCAACCGGTAA

Upstream 100 bases:

>100_bases
ACTGCTGCTGGGCGACGCGACGACGTCCGGGCCGCTGCTGAGCGATGGGCTGGAGGCGTTGATGGATGCCTTCCCTGACA
AGACATAAAGGACAGCCAAG

Downstream 100 bases:

>100_bases
CTTGAAGGGACCAAGAAATGCAATTTCATGATGTCAGATTTCCGGCAAAACTGAGCTTTGGCTCCGTTGGCGGACCCGAG
CGGCGCACAGACGTTGTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: Gene Transfer Agent Orfg; Gene Transfer Agent Like Protein; Phage Tail Minor Protein; Phage-Related Minor Tail Protein-Like; PHage Minor Tail Protein H; Phage-Related Minor Tail Protein-Like Protein; Gene Transfer Agent Protein

Number of amino acids: Translated: 220; Mature: 219

Protein sequence:

>220_residues
MTDDNSFEDLEAGAEGLNDTLGQTSTLVSGFDGELRRMQNALDATSKGLATVERGISRGLRGAFDGVILDGVKLSDALKS
VRDSMVQTAYNAAIKPVTNGLGSALAQGVGGLVQGVLPFANGAPFSQGRVMPFANGGIVSSTTPFGMRGGMGIMGEAGPE
AIMPLARGPDGKLGVRGAGGGGGQTIVMNISTPDVQNFQRSQAQIAAQMSRALGRGQRNR

Sequences:

>Translated_220_residues
MTDDNSFEDLEAGAEGLNDTLGQTSTLVSGFDGELRRMQNALDATSKGLATVERGISRGLRGAFDGVILDGVKLSDALKS
VRDSMVQTAYNAAIKPVTNGLGSALAQGVGGLVQGVLPFANGAPFSQGRVMPFANGGIVSSTTPFGMRGGMGIMGEAGPE
AIMPLARGPDGKLGVRGAGGGGGQTIVMNISTPDVQNFQRSQAQIAAQMSRALGRGQRNR
>Mature_219_residues
TDDNSFEDLEAGAEGLNDTLGQTSTLVSGFDGELRRMQNALDATSKGLATVERGISRGLRGAFDGVILDGVKLSDALKSV
RDSMVQTAYNAAIKPVTNGLGSALAQGVGGLVQGVLPFANGAPFSQGRVMPFANGGIVSSTTPFGMRGGMGIMGEAGPEA
IMPLARGPDGKLGVRGAGGGGGQTIVMNISTPDVQNFQRSQAQIAAQMSRALGRGQRNR

Specific function: Unknown

COG id: COG5281

COG function: function code S; Phage-related minor tail protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22485; Mature: 22354

Theoretical pI: Translated: 9.16; Mature: 9.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDDNSFEDLEAGAEGLNDTLGQTSTLVSGFDGELRRMQNALDATSKGLATVERGISRGL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RGAFDGVILDGVKLSDALKSVRDSMVQTAYNAAIKPVTNGLGSALAQGVGGLVQGVLPFA
HHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NGAPFSQGRVMPFANGGIVSSTTPFGMRGGMGIMGEAGPEAIMPLARGPDGKLGVRGAGG
CCCCCCCCCEEEECCCCEECCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCEEECCCCC
GGGQTIVMNISTPDVQNFQRSQAQIAAQMSRALGRGQRNR
CCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TDDNSFEDLEAGAEGLNDTLGQTSTLVSGFDGELRRMQNALDATSKGLATVERGISRGL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RGAFDGVILDGVKLSDALKSVRDSMVQTAYNAAIKPVTNGLGSALAQGVGGLVQGVLPFA
HHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NGAPFSQGRVMPFANGGIVSSTTPFGMRGGMGIMGEAGPEAIMPLARGPDGKLGVRGAGG
CCCCCCCCCEEEECCCCEECCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCEEECCCCC
GGGQTIVMNISTPDVQNFQRSQAQIAAQMSRALGRGQRNR
CCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA