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The map label for this gene is yagQ [H]

Identifier: 110680175

GI number: 110680175

Start: 2853801

End: 2854769

Strand: Reverse

Name: yagQ [H]

Synonym: RD1_2976

Alternate gene names: 110680175

Gene position: 2854769-2853801 (Counterclockwise)

Preceding gene: 110680179

Following gene: 110680174

Centisome position: 69.07

GC content: 64.29

Gene sequence:

>969_bases
ATGGATGTTTTTGAAAACGCACCGGAACAGGCGCTGGACTGGCACACGTCAGGGCGCGGGGCGGTTCTGGCGACGGTGGT
TGAGACATGGGGGTCTGCCCCCCGGCGCACCGGCGCGCAGTTGGTGATCGCGGGGGATGGCGAAATGCAGGGCTCCGTCT
CTGGCGGCTGCGTCGAGGGGGCGGTTGTGCTTGAGGCCATGGAAGCGCTGGAAAAGGGCGAACAGCGCCTGCTCGAATAT
GGCGTGAGCGATGGGGATGCCTTTGCGGTCGGGCTGGCCTGCGGGGGAACGATCCGCGTGCTGGTCGAACCCGTTGGCGC
GGTCATTCCGGCGGATACTCTGAAAGCACTGGTCACAGCACGCGCCGCACGGCAGTCCGTCGCCTTTGAGGTCAACCTCG
ACACCGGAGCGCGCCGTCTGGTGCAGGACGCCTACCCGGAGCGGTTCGCGCGCGACCAGTCCGGTTTTGAATCGGATGGC
GCGGTCTTTGTGGCCATTCACAACCCGCCTTTGCGCCTTGCAATTGTGGGGGCGGTGCATATTGCGCAGGCGCTGGTGCC
GATGGCGCGTATTGCCGGATATGACCCGGTGATCATCGACCCGCGCGGCGCATTCGGCTCGCAAGCGCGCTTTCCCGGTG
AAAAGATCCTCGCCGATTGGCCGGATGAAGCGCTGGCCGAGGTCGGGCTTGATGCGCGCACAGCACTGGTTTTGCTGACC
CATGATCCGAAACTGGACGATCCCGCCTTGCATCTGGCGCTGAAATCCCCGTGTTTCTACATCGGGGCGCTCGGATCAAA
ACGCACGCATGCAGCACGGGTCGCACGGCTTCAGGATGCCGGGTTTGGCCCTGCGGAAATCGCACGCATTCATGGCCCTG
TCGGGCTGGATATCGGCGCATCGGGTCCACCGGAAATTGCCGTGTCGATCCTCGCTGAAATGACGCAAAGCCTGAGGCGC
GGGGCATGA

Upstream 100 bases:

>100_bases
GAGGCGCGCGTCGGAACAAGATGTCAATTTGACAGGGTTGATGCATATTTCGAAAGCGGGGCGTCTTGGGCGACACCGCT
GCGGTCGGGGGAGGAACGAG

Downstream 100 bases:

>100_bases
AGTTCGGTCCTGTGCCTTTATCTGACGCCGAAGGGGCCGTTCTGGCGCATTCGGTTGGGCTGAATGGCAAAAGGCGTCTG
CGCAAAGGGCGAAGCCTTGA

Product: xanthine dehydrogenase accessory factor, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 322; Mature: 322

Protein sequence:

>322_residues
MDVFENAPEQALDWHTSGRGAVLATVVETWGSAPRRTGAQLVIAGDGEMQGSVSGGCVEGAVVLEAMEALEKGEQRLLEY
GVSDGDAFAVGLACGGTIRVLVEPVGAVIPADTLKALVTARAARQSVAFEVNLDTGARRLVQDAYPERFARDQSGFESDG
AVFVAIHNPPLRLAIVGAVHIAQALVPMARIAGYDPVIIDPRGAFGSQARFPGEKILADWPDEALAEVGLDARTALVLLT
HDPKLDDPALHLALKSPCFYIGALGSKRTHAARVARLQDAGFGPAEIARIHGPVGLDIGASGPPEIAVSILAEMTQSLRR
GA

Sequences:

>Translated_322_residues
MDVFENAPEQALDWHTSGRGAVLATVVETWGSAPRRTGAQLVIAGDGEMQGSVSGGCVEGAVVLEAMEALEKGEQRLLEY
GVSDGDAFAVGLACGGTIRVLVEPVGAVIPADTLKALVTARAARQSVAFEVNLDTGARRLVQDAYPERFARDQSGFESDG
AVFVAIHNPPLRLAIVGAVHIAQALVPMARIAGYDPVIIDPRGAFGSQARFPGEKILADWPDEALAEVGLDARTALVLLT
HDPKLDDPALHLALKSPCFYIGALGSKRTHAARVARLQDAGFGPAEIARIHGPVGLDIGASGPPEIAVSILAEMTQSLRR
GA
>Mature_322_residues
MDVFENAPEQALDWHTSGRGAVLATVVETWGSAPRRTGAQLVIAGDGEMQGSVSGGCVEGAVVLEAMEALEKGEQRLLEY
GVSDGDAFAVGLACGGTIRVLVEPVGAVIPADTLKALVTARAARQSVAFEVNLDTGARRLVQDAYPERFARDQSGFESDG
AVFVAIHNPPLRLAIVGAVHIAQALVPMARIAGYDPVIIDPRGAFGSQARFPGEKILADWPDEALAEVGLDARTALVLLT
HDPKLDDPALHLALKSPCFYIGALGSKRTHAARVARLQDAGFGPAEIARIHGPVGLDIGASGPPEIAVSILAEMTQSLRR
GA

Specific function: Unknown

COG id: COG1975

COG function: function code O; Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786477, Length=298, Percent_Identity=35.2348993288591, Blast_Score=115, Evalue=4e-27,
Organism=Escherichia coli, GI1789240, Length=174, Percent_Identity=32.7586206896552, Blast_Score=81, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003777 [H]

Pfam domain/function: PF02625 XdhC_CoxI [H]

EC number: NA

Molecular weight: Translated: 33660; Mature: 33660

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVFENAPEQALDWHTSGRGAVLATVVETWGSAPRRTGAQLVIAGDGEMQGSVSGGCVEG
CCCCCCCCHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCHHHH
AVVLEAMEALEKGEQRLLEYGVSDGDAFAVGLACGGTIRVLVEPVGAVIPADTLKALVTA
HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEEEEHHCCCCCHHHHHHHHHH
RAARQSVAFEVNLDTGARRLVQDAYPERFARDQSGFESDGAVFVAIHNPPLRLAIVGAVH
HHHHHEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEEHHHHH
IAQALVPMARIAGYDPVIIDPRGAFGSQARFPGEKILADWPDEALAEVGLDARTALVLLT
HHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCHHCCCCCHHHHHHCCCCCCEEEEEEE
HDPKLDDPALHLALKSPCFYIGALGSKRTHAARVARLQDAGFGPAEIARIHGPVGLDIGA
CCCCCCCHHHEEEECCCEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCEEECCCC
SGPPEIAVSILAEMTQSLRRGA
CCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDVFENAPEQALDWHTSGRGAVLATVVETWGSAPRRTGAQLVIAGDGEMQGSVSGGCVEG
CCCCCCCCHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCHHHH
AVVLEAMEALEKGEQRLLEYGVSDGDAFAVGLACGGTIRVLVEPVGAVIPADTLKALVTA
HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEEEEHHCCCCCHHHHHHHHHH
RAARQSVAFEVNLDTGARRLVQDAYPERFARDQSGFESDGAVFVAIHNPPLRLAIVGAVH
HHHHHEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEEHHHHH
IAQALVPMARIAGYDPVIIDPRGAFGSQARFPGEKILADWPDEALAEVGLDARTALVLLT
HHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCHHCCCCCHHHHHHCCCCCCEEEEEEE
HDPKLDDPALHLALKSPCFYIGALGSKRTHAARVARLQDAGFGPAEIARIHGPVGLDIGA
CCCCCCCHHHEEEECCCEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCEEECCCC
SGPPEIAVSILAEMTQSLRRGA
CCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]