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The map label for this gene is 110680141

Identifier: 110680141

GI number: 110680141

Start: 2819870

End: 2820400

Strand: Reverse

Name: 110680141

Synonym: RD1_2940

Alternate gene names: NA

Gene position: 2820400-2819870 (Counterclockwise)

Preceding gene: 110680143

Following gene: 110680140

Centisome position: 68.24

GC content: 60.26

Gene sequence:

>531_bases
TTGGACCACAACAAACCAGTGCCACATTCGGTCTGGCTCTGCCCGCAGATCGGGCAGGGGCCACCCCTAACGGAAGAGAT
CGCAGCTTATGCTCAGCGGTTTGGCACGGCCGTCTTTGAACCGCATGTGACGCTTTTGGGGGATCTGCGCACCGCCCCGC
AGCTTACTGTTGCGGCCTGCCGGTCGCTGTCGGGGCGTTTGCCCAAGACAACGGCGTGCATCAGCCGCGTGTCGCAAACG
GCGGATTTTTTCATGTCGCTGTTTCTGGATCTGGATATCACGGAGGCGGTGACATCGGCGCGGGCGGAACTGGCGTCAGC
GCTCGGCATGGCGTTGCCGCAGCCTTTTCGGCCACATCTGAGCCTTGCCTATGGTCTGCCTGCGGGTGAACCGGGGCAAC
AGGCCCTGCAGGAATTGTCTGACCGCCTTGTCGGTCAGACCCTGACACTGCATGAGTTGAAAGTCGTCTTTTCCGCCAAG
GAGATCGCCATCGAGGATTGGCGCGCCATTCATGTTGAGCATCTGAATTAG

Upstream 100 bases:

>100_bases
TTTGCGACGCCGTGTTACTATGCCACAGGCCGGGCCGGGTTTCACGCCTTGATGAAAACCGATCGACTTTGGCCACGCGG
CAGCCTTGGGGAAACGGGAA

Downstream 100 bases:

>100_bases
CGCGAGGCCTTTGGCGCAGGAACGTGGCGAAGTTTGAGCGTTTTGGTTGACAGTCACGTCTTTTGGGTCATTCTCTGCGC
GGTGACTGGGATCGTTTCGT

Product: cyclic phosphodiesterase, putative

Products: NA

Alternate protein names: Cyclic Phosphodiesterase

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MDHNKPVPHSVWLCPQIGQGPPLTEEIAAYAQRFGTAVFEPHVTLLGDLRTAPQLTVAACRSLSGRLPKTTACISRVSQT
ADFFMSLFLDLDITEAVTSARAELASALGMALPQPFRPHLSLAYGLPAGEPGQQALQELSDRLVGQTLTLHELKVVFSAK
EIAIEDWRAIHVEHLN

Sequences:

>Translated_176_residues
MDHNKPVPHSVWLCPQIGQGPPLTEEIAAYAQRFGTAVFEPHVTLLGDLRTAPQLTVAACRSLSGRLPKTTACISRVSQT
ADFFMSLFLDLDITEAVTSARAELASALGMALPQPFRPHLSLAYGLPAGEPGQQALQELSDRLVGQTLTLHELKVVFSAK
EIAIEDWRAIHVEHLN
>Mature_176_residues
MDHNKPVPHSVWLCPQIGQGPPLTEEIAAYAQRFGTAVFEPHVTLLGDLRTAPQLTVAACRSLSGRLPKTTACISRVSQT
ADFFMSLFLDLDITEAVTSARAELASALGMALPQPFRPHLSLAYGLPAGEPGQQALQELSDRLVGQTLTLHELKVVFSAK
EIAIEDWRAIHVEHLN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19159; Mature: 19159

Theoretical pI: Translated: 6.14; Mature: 6.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDHNKPVPHSVWLCPQIGQGPPLTEEIAAYAQRFGTAVFEPHVTLLGDLRTAPQLTVAAC
CCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHCCHHHCCHHHHHHCCCCCCHHHHHHH
RSLSGRLPKTTACISRVSQTADFFMSLFLDLDITEAVTSARAELASALGMALPQPFRPHL
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCE
SLAYGLPAGEPGQQALQELSDRLVGQTLTLHELKVVFSAKEIAIEDWRAIHVEHLN
EEEECCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEEEEEECC
>Mature Secondary Structure
MDHNKPVPHSVWLCPQIGQGPPLTEEIAAYAQRFGTAVFEPHVTLLGDLRTAPQLTVAAC
CCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHCCHHHCCHHHHHHCCCCCCHHHHHHH
RSLSGRLPKTTACISRVSQTADFFMSLFLDLDITEAVTSARAELASALGMALPQPFRPHL
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCE
SLAYGLPAGEPGQQALQELSDRLVGQTLTLHELKVVFSAKEIAIEDWRAIHVEHLN
EEEECCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA