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The map label for this gene is glgC

Identifier: 110680079

GI number: 110680079

Start: 2748039

End: 2749298

Strand: Reverse

Name: glgC

Synonym: RD1_2874

Alternate gene names: 110680079

Gene position: 2749298-2748039 (Counterclockwise)

Preceding gene: 110680080

Following gene: 110680078

Centisome position: 66.52

GC content: 56.9

Gene sequence:

>1260_bases
ATGAACAGAGAAGAACAACGATTGGCGCAACAGACCATGGCCTTTGTTCTGGCCGGGGGGCGGGGCAGCCGCCTTTATGA
GCTCACGGACCGTCGCGCCAAACCTGCGATGTATTTTGGTGGCAAGAGCAGGATCATTGATTTTCCCCTGTCCAATGCCG
TGAATTCGGGGATCCGGCGGATCGGGGTCGCAACGCAATACAAGGCGCATTCACTGATCCGACACTTGCAGCGGGGCTGG
AGTTTCTTTCGGGCCGAGCGCAATGAATCACTCGATATTCTGCCCGCTTCACAACAGATGAATGATGAGAACTGGTATAA
GGGCACAGCCGATGCGGTGGCCCAGAACAAGGACATCATCGAAGGCTACGGGCCCAAGTACATCATCATTCTGGCAGGCG
ATCACATCTACAAGCAGGACTACGCGGAAATGATCCGCCATCACGTGGAAAGTGGTGCGGATGTCACTGTCGGCTGTATC
GAAGTGCCGCGCATGGAAGCCAGCGGTTTTGGCGTGATGAAAGTGGATACCGAAGACCGCATTCTCGATTTCATCGAAAA
ACCCGGCGATCCGCCTGCGATGCCGGGACATCCGGATCAGGCTTTGGCGAGTATGGGGATCTATGTTTTTGAAACGGAAT
ACCTTTTCAAGATCATGGAAGAATGCGCGGCGGTCCCGGGGTATTCCCATGATTTTGGCGGCGATATCATTCCGACCATC
GTGCGAGGCGGAAAGGCCGTGGCGCATCCGTTCAGCCGCTCCTGCGTGCGCACCGTTAATGAGGAAGCGCCCTATTGGCG
CGATGTCGGCACGGTTGATGCGTTCTGGCAGGCCAACCTTGACCTGACGGATTTCAAACCGGCGCTGGATCTATACGATA
CCGAATGGCCGATCTGGACCTATTCGGAGCTCACGGCGCCCGCCAAATTCATCCACAACGAAGAAGGGCGGCGCGGGTCT
GCGGTGTCCTCCATGGTGTCGGGCGGGTGCATTATTTCAGGCTCCAGTCTTGAGCGTTGTCTGCTGTTTACCGGCGTGCG
CACCCATTCATTCTCGCAGTTGAACGGGGTGGTTTCGATGCCCTATGCCATCATCAACCGAAATGCGCGGCTGACCAATG
TGGTGGTAGATCGCGGCGTGGTCATTCCGCAGGGCCTCGTCGTCGGAGAAGACCCGGCCCTTGATGCGCAGCGCTTTCGG
CGCACGGACAGCGGGGTCTGCCTGATAACGCAACCGATGATCGACAAGCTGGATATGTAA

Upstream 100 bases:

>100_bases
CGACGTGGTTTTGCCGCCGCTCACCACGCTGTTTTTTCAGCTGGATGACGGGTGAAGGCAGCCGCGCGGCGCTGGACGGA
TTTAAGGGGAGGATGAGAGG

Downstream 100 bases:

>100_bases
CGTGAAAGTTCTTTTTGTGGCATCCGAATGCGCACCCTTTGTCAAAACGGGTGGTCTGGCGGATGTGATCGGCGCGGTCC
CCAAGGCGCTTGCGCCGCTG

Product: glucose-1-phosphate adenylyltransferase

Products: NA

Alternate protein names: ADP-glucose pyrophosphorylase; ADPGlc PPase; ADP-glucose synthase

Number of amino acids: Translated: 419; Mature: 419

Protein sequence:

>419_residues
MNREEQRLAQQTMAFVLAGGRGSRLYELTDRRAKPAMYFGGKSRIIDFPLSNAVNSGIRRIGVATQYKAHSLIRHLQRGW
SFFRAERNESLDILPASQQMNDENWYKGTADAVAQNKDIIEGYGPKYIIILAGDHIYKQDYAEMIRHHVESGADVTVGCI
EVPRMEASGFGVMKVDTEDRILDFIEKPGDPPAMPGHPDQALASMGIYVFETEYLFKIMEECAAVPGYSHDFGGDIIPTI
VRGGKAVAHPFSRSCVRTVNEEAPYWRDVGTVDAFWQANLDLTDFKPALDLYDTEWPIWTYSELTAPAKFIHNEEGRRGS
AVSSMVSGGCIISGSSLERCLLFTGVRTHSFSQLNGVVSMPYAIINRNARLTNVVVDRGVVIPQGLVVGEDPALDAQRFR
RTDSGVCLITQPMIDKLDM

Sequences:

>Translated_419_residues
MNREEQRLAQQTMAFVLAGGRGSRLYELTDRRAKPAMYFGGKSRIIDFPLSNAVNSGIRRIGVATQYKAHSLIRHLQRGW
SFFRAERNESLDILPASQQMNDENWYKGTADAVAQNKDIIEGYGPKYIIILAGDHIYKQDYAEMIRHHVESGADVTVGCI
EVPRMEASGFGVMKVDTEDRILDFIEKPGDPPAMPGHPDQALASMGIYVFETEYLFKIMEECAAVPGYSHDFGGDIIPTI
VRGGKAVAHPFSRSCVRTVNEEAPYWRDVGTVDAFWQANLDLTDFKPALDLYDTEWPIWTYSELTAPAKFIHNEEGRRGS
AVSSMVSGGCIISGSSLERCLLFTGVRTHSFSQLNGVVSMPYAIINRNARLTNVVVDRGVVIPQGLVVGEDPALDAQRFR
RTDSGVCLITQPMIDKLDM
>Mature_419_residues
MNREEQRLAQQTMAFVLAGGRGSRLYELTDRRAKPAMYFGGKSRIIDFPLSNAVNSGIRRIGVATQYKAHSLIRHLQRGW
SFFRAERNESLDILPASQQMNDENWYKGTADAVAQNKDIIEGYGPKYIIILAGDHIYKQDYAEMIRHHVESGADVTVGCI
EVPRMEASGFGVMKVDTEDRILDFIEKPGDPPAMPGHPDQALASMGIYVFETEYLFKIMEECAAVPGYSHDFGGDIIPTI
VRGGKAVAHPFSRSCVRTVNEEAPYWRDVGTVDAFWQANLDLTDFKPALDLYDTEWPIWTYSELTAPAKFIHNEEGRRGS
AVSSMVSGGCIISGSSLERCLLFTGVRTHSFSQLNGVVSMPYAIINRNARLTNVVVDRGVVIPQGLVVGEDPALDAQRFR
RTDSGVCLITQPMIDKLDM

Specific function: Glycogen biosynthesis; first step. [C]

COG id: COG0448

COG function: function code G; ADP-glucose pyrophosphorylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family

Homologues:

Organism=Escherichia coli, GI1789837, Length=412, Percent_Identity=54.3689320388349, Blast_Score=496, Evalue=1e-141,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GLGC_ROSDO (Q165E3)

Other databases:

- EMBL:   CP000362
- RefSeq:   YP_683086.1
- ProteinModelPortal:   Q165E3
- SMR:   Q165E3
- STRING:   Q165E3
- GeneID:   4196032
- GenomeReviews:   CP000362_GR
- KEGG:   rde:RD1_2874
- NMPDR:   fig|375451.6.peg.2669
- eggNOG:   COG0448
- HOGENOM:   HBG703946
- OMA:   GTVDAYW
- PhylomeDB:   Q165E3
- ProtClustDB:   PRK00725
- BioCyc:   RDEN375451:RD1_2874-MONOMER
- HAMAP:   MF_00624
- InterPro:   IPR005836
- InterPro:   IPR011831
- InterPro:   IPR023049
- InterPro:   IPR005835
- InterPro:   IPR011004
- TIGRFAMs:   TIGR02091

Pfam domain/function: PF00483 NTP_transferase; SSF51161 Trimer_LpxA_like

EC number: =2.7.7.27

Molecular weight: Translated: 46652; Mature: 46652

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: PS00808 ADP_GLC_PYROPHOSPH_1; PS00809 ADP_GLC_PYROPHOSPH_2; PS00810 ADP_GLC_PYROPHOSPH_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNREEQRLAQQTMAFVLAGGRGSRLYELTDRRAKPAMYFGGKSRIIDFPLSNAVNSGIRR
CCHHHHHHHHHHHHHEEECCCCCEEEEEHHCCCCCCEEECCCCEEEECCHHHHHHHHHHH
IGVATQYKAHSLIRHLQRGWSFFRAERNESLDILPASQQMNDENWYKGTADAVAQNKDII
HCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHCCCCCCCCCCHHHHHCCCCHH
EGYGPKYIIILAGDHIYKQDYAEMIRHHVESGADVTVGCIEVPRMEASGFGVMKVDTEDR
CCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCEEEEECCHHH
ILDFIEKPGDPPAMPGHPDQALASMGIYVFETEYLFKIMEECAAVPGYSHDFGGDIIPTI
HHHHHHCCCCCCCCCCCCHHHHHHCCEEEEEHHHHHHHHHHHHCCCCCCCCCCCCHHHHH
VRGGKAVAHPFSRSCVRTVNEEAPYWRDVGTVDAFWQANLDLTDFKPALDLYDTEWPIWT
HCCCCHHCCHHHHHHHHHHHCCCCCCCCCCCEEHHEECCCCCCCCCCCCCCCCCCCCEEE
YSELTAPAKFIHNEEGRRGSAVSSMVSGGCIISGSSLERCLLFTGVRTHSFSQLNGVVSM
HHHHCCHHHHHCCCCCCCCHHHHHHHCCCEEEECCCHHHHHHHHCCCCCCHHHHCCHHCC
PYAIINRNARLTNVVVDRGVVIPQGLVVGEDPALDAQRFRRTDSGVCLITQPMIDKLDM
CHHHHCCCCEEEEEEECCCEECCCCEEECCCCCCCHHHHHCCCCCEEEEECHHHHHCCC
>Mature Secondary Structure
MNREEQRLAQQTMAFVLAGGRGSRLYELTDRRAKPAMYFGGKSRIIDFPLSNAVNSGIRR
CCHHHHHHHHHHHHHEEECCCCCEEEEEHHCCCCCCEEECCCCEEEECCHHHHHHHHHHH
IGVATQYKAHSLIRHLQRGWSFFRAERNESLDILPASQQMNDENWYKGTADAVAQNKDII
HCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHCCCCCCCCCCHHHHHCCCCHH
EGYGPKYIIILAGDHIYKQDYAEMIRHHVESGADVTVGCIEVPRMEASGFGVMKVDTEDR
CCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCEEEEECCHHH
ILDFIEKPGDPPAMPGHPDQALASMGIYVFETEYLFKIMEECAAVPGYSHDFGGDIIPTI
HHHHHHCCCCCCCCCCCCHHHHHHCCEEEEEHHHHHHHHHHHHCCCCCCCCCCCCHHHHH
VRGGKAVAHPFSRSCVRTVNEEAPYWRDVGTVDAFWQANLDLTDFKPALDLYDTEWPIWT
HCCCCHHCCHHHHHHHHHHHCCCCCCCCCCCEEHHEECCCCCCCCCCCCCCCCCCCCEEE
YSELTAPAKFIHNEEGRRGSAVSSMVSGGCIISGSSLERCLLFTGVRTHSFSQLNGVVSM
HHHHCCHHHHHCCCCCCCCHHHHHHHCCCEEEECCCHHHHHHHHCCCCCCHHHHCCHHCC
PYAIINRNARLTNVVVDRGVVIPQGLVVGEDPALDAQRFRRTDSGVCLITQPMIDKLDM
CHHHHCCCCEEEEEEECCCEECCCCEEECCCCCCCHHHHHCCCCCEEEEECHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA