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The map label for this gene is yeaW [H]

Identifier: 110680023

GI number: 110680023

Start: 2685068

End: 2686228

Strand: Direct

Name: yeaW [H]

Synonym: RD1_2816

Alternate gene names: 110680023

Gene position: 2685068-2686228 (Clockwise)

Preceding gene: 110680022

Following gene: 110680024

Centisome position: 64.97

GC content: 59.17

Gene sequence:

>1161_bases
ATGGAAAGTCGTGCTACGGATTTATCTTCCGTTCGCCGCCCGATTGCGCAGGCCAATGGTTTGCCAAACGCGCATTACAC
GGATGCCGCCGTATTTGACGAAGAAAAGCAGGCGTTGCTCTTCGCGGGCTGGTCCGGGCTTGCGGTGGCCGCTGATGTGC
CACAGGTCGGTGACGCGGTGCCGCTCGACTTTCTCGGCGTGCCGCTTTTGCTGATCCGGGACCGTCAGGATAAGGTGCGG
GTGTTCCAGAACATCTGCCGTCATCGCGGGATGATCCTGGTGGATGCGCCGCGCAGGATCGAAGGGGCCATCAGATGCCC
CTACCACAGCTGGTGCTATTCGACCGAAGGACACCTTGTCAGCACACCGCATGTGGGCGGGCCGGGCCAGAACAGGCATG
AAGGCATCGACCGCGCGCTGCTCGGGCTGATCGAGGTGCGCAGCCATATCTGGATGGGCGTTGTCTGGATCAACCTGTCC
GGCACGGCGGCGGATTTCGACGTTGCGAACGCAAAGATGATGGCCCGCTGGCAGGAATTTGACAAACCTCTCTACCACGG
CGGCAGCGAGAGCCGCTTTACCCTCGAGGTAAAGTGCAACTGGAAGCTGGCCGTCGAAAACTATTGCGAAAGCTACCATC
TGCCCTGGGTGCATCCCGGCCTCAACAGCTATTCGCGTCTGGAAGATCACTACCACATCGAAGAGGATGACGCGTTTTCA
GGACAAGGCACGCTGGTCTACCGCCAGATCAGGGACGCGGCGGGAAACAGTTTTCCGGATTTCGACGCGTTGAGCGACAA
ATGGGATACGGCGGCGGAATACATCACCGGGTTTCCCAACGTGCTACTGGGGGTTCACCGCGATCATACATTCGCCATCA
TCCTGCAACCGGTCGGGCCTGAGAAAACGCTGGAACATGTGTATCTGTTTTATGCACAACCAGATACCAGCGAAGCCTTG
CGCATCCAGAACGCCGCGCAGTGGAAGACAGTTTTCGAAGAAGACGTCTTCGTGGTCGAGGGCATGCAGCGCGGACGCCA
TGCGGTATCCTTTGACGGCGGGCGATTTTCGCCAGCCATGGATGGGCCAACGCATCTGTTTCATGCCTGGGTCGCGGGCA
AGATCGAACACGCCCGCGCGCAAAAGCAAGCAGCGGAGTAA

Upstream 100 bases:

>100_bases
TAGAGCATGTCGCCCCGCAGCCAACGAGGTCGCTGCAGCGACAGCCAACACATCGACCTTCAGTATTCTGATGCAAACAA
CGATCATCAGGAGTTCTGAC

Downstream 100 bases:

>100_bases
TGTCGCTTGACGCACAGCTGCTCGCCGCACATGCGGAGGGCGACACGGATCGTCTGGTTACCCTCTATGCGCAGGCGGCG
GCCAGCGCGGACGATCCCGA

Product: Rieske (2Fe-2S) domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 386; Mature: 386

Protein sequence:

>386_residues
MESRATDLSSVRRPIAQANGLPNAHYTDAAVFDEEKQALLFAGWSGLAVAADVPQVGDAVPLDFLGVPLLLIRDRQDKVR
VFQNICRHRGMILVDAPRRIEGAIRCPYHSWCYSTEGHLVSTPHVGGPGQNRHEGIDRALLGLIEVRSHIWMGVVWINLS
GTAADFDVANAKMMARWQEFDKPLYHGGSESRFTLEVKCNWKLAVENYCESYHLPWVHPGLNSYSRLEDHYHIEEDDAFS
GQGTLVYRQIRDAAGNSFPDFDALSDKWDTAAEYITGFPNVLLGVHRDHTFAIILQPVGPEKTLEHVYLFYAQPDTSEAL
RIQNAAQWKTVFEEDVFVVEGMQRGRHAVSFDGGRFSPAMDGPTHLFHAWVAGKIEHARAQKQAAE

Sequences:

>Translated_386_residues
MESRATDLSSVRRPIAQANGLPNAHYTDAAVFDEEKQALLFAGWSGLAVAADVPQVGDAVPLDFLGVPLLLIRDRQDKVR
VFQNICRHRGMILVDAPRRIEGAIRCPYHSWCYSTEGHLVSTPHVGGPGQNRHEGIDRALLGLIEVRSHIWMGVVWINLS
GTAADFDVANAKMMARWQEFDKPLYHGGSESRFTLEVKCNWKLAVENYCESYHLPWVHPGLNSYSRLEDHYHIEEDDAFS
GQGTLVYRQIRDAAGNSFPDFDALSDKWDTAAEYITGFPNVLLGVHRDHTFAIILQPVGPEKTLEHVYLFYAQPDTSEAL
RIQNAAQWKTVFEEDVFVVEGMQRGRHAVSFDGGRFSPAMDGPTHLFHAWVAGKIEHARAQKQAAE
>Mature_386_residues
MESRATDLSSVRRPIAQANGLPNAHYTDAAVFDEEKQALLFAGWSGLAVAADVPQVGDAVPLDFLGVPLLLIRDRQDKVR
VFQNICRHRGMILVDAPRRIEGAIRCPYHSWCYSTEGHLVSTPHVGGPGQNRHEGIDRALLGLIEVRSHIWMGVVWINLS
GTAADFDVANAKMMARWQEFDKPLYHGGSESRFTLEVKCNWKLAVENYCESYHLPWVHPGLNSYSRLEDHYHIEEDDAFS
GQGTLVYRQIRDAAGNSFPDFDALSDKWDTAAEYITGFPNVLLGVHRDHTFAIILQPVGPEKTLEHVYLFYAQPDTSEAL
RIQNAAQWKTVFEEDVFVVEGMQRGRHAVSFDGGRFSPAMDGPTHLFHAWVAGKIEHARAQKQAAE

Specific function: Unknown

COG id: COG4638

COG function: function code PR; Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Escherichia coli, GI1788103, Length=340, Percent_Identity=25.2941176470588, Blast_Score=114, Evalue=1e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941
- InterPro:   IPR015881
- InterPro:   IPR001663 [H]

Pfam domain/function: PF00355 Rieske [H]

EC number: 1.14.1.- [C]

Molecular weight: Translated: 43315; Mature: 43315

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESRATDLSSVRRPIAQANGLPNAHYTDAAVFDEEKQALLFAGWSGLAVAADVPQVGDAV
CCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCEEEEECCCCCEEEECCCCCCCCC
PLDFLGVPLLLIRDRQDKVRVFQNICRHRGMILVDAPRRIEGAIRCPYHSWCYSTEGHLV
CHHHHCCCEEEEECCHHHHHHHHHHHHHCCEEEEECCCCCCCEEECCCHHHCCCCCCCEE
STPHVGGPGQNRHEGIDRALLGLIEVRSHIWMGVVWINLSGTAADFDVANAKMMARWQEF
ECCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCCCCHHHHHHHHHHHHH
DKPLYHGGSESRFTLEVKCNWKLAVENYCESYHLPWVHPGLNSYSRLEDHYHIEEDDAFS
CCHHHCCCCCCEEEEEEEEEEEEEEHHHHHHCCCCEECCCCCHHHHHHHCCCCCCCCCCC
GQGTLVYRQIRDAAGNSFPDFDALSDKWDTAAEYITGFPNVLLGVHRDHTFAIILQPVGP
CCCCEEHHHHHHHCCCCCCCCHHHCCCHHHHHHHHHCCCHHHEEECCCCEEEEEEECCCC
EKTLEHVYLFYAQPDTSEALRIQNAAQWKTVFEEDVFVVEGMQRGRHAVSFDGGRFSPAM
CCCEEEEEEEEECCCCCHHHHHCCHHHHHHHHHCCCCEEEHHHCCCEEEEECCCCCCCCC
DGPTHLFHAWVAGKIEHARAQKQAAE
CCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MESRATDLSSVRRPIAQANGLPNAHYTDAAVFDEEKQALLFAGWSGLAVAADVPQVGDAV
CCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCEEEEECCCCCEEEECCCCCCCCC
PLDFLGVPLLLIRDRQDKVRVFQNICRHRGMILVDAPRRIEGAIRCPYHSWCYSTEGHLV
CHHHHCCCEEEEECCHHHHHHHHHHHHHCCEEEEECCCCCCCEEECCCHHHCCCCCCCEE
STPHVGGPGQNRHEGIDRALLGLIEVRSHIWMGVVWINLSGTAADFDVANAKMMARWQEF
ECCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCCCCHHHHHHHHHHHHH
DKPLYHGGSESRFTLEVKCNWKLAVENYCESYHLPWVHPGLNSYSRLEDHYHIEEDDAFS
CCHHHCCCCCCEEEEEEEEEEEEEEHHHHHHCCCCEECCCCCHHHHHHHCCCCCCCCCCC
GQGTLVYRQIRDAAGNSFPDFDALSDKWDTAAEYITGFPNVLLGVHRDHTFAIILQPVGP
CCCCEEHHHHHHHCCCCCCCCHHHCCCHHHHHHHHHCCCHHHEEECCCCEEEEEEECCCC
EKTLEHVYLFYAQPDTSEALRIQNAAQWKTVFEEDVFVVEGMQRGRHAVSFDGGRFSPAM
CCCEEEEEEEEECCCCCHHHHHCCHHHHHHHHHCCCCEEEHHHCCCEEEEECCCCCCCCC
DGPTHLFHAWVAGKIEHARAQKQAAE
CCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]