| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is glnE [H]
Identifier: 110680010
GI number: 110680010
Start: 2668600
End: 2671392
Strand: Reverse
Name: glnE [H]
Synonym: RD1_2802
Alternate gene names: 110680010
Gene position: 2671392-2668600 (Counterclockwise)
Preceding gene: 110680014
Following gene: 110680009
Centisome position: 64.63
GC content: 62.01
Gene sequence:
>2793_bases ATGAATTTATCTGATGCCATTCGCCGCGTGCCAACGCTCTTTGACGCTCAGAAAGGGCGGGAACTGGCGGCGCTGTTTTC GGACTTCAGCCCTGATGTCAGCGCGTTGATCGCGGGGGCGGCGGGGTGCAGCCCCTATCTTGCCGGGTTGATCGAAAAGG AGCAGGAGTGGCTGAGATCCGCGTTCGAGGATGTGGACAAGGCCGTGGCGGATGAGATCGCAAGTGCCGCGTTCCACGCG CCGGACGGATTGGCGGATGGGTTGCGTCGTGCAAAGCGTCGGGTCGCTGTGATCTCGGCTTTGGCGGACCTTGGCGGGGC ATGGCCGCTGGAGCGGGTAACAGCTGCGTTGACCGACCTTGCCGATGCGGCCTGTCAGTCAGCGCTGCGCGCGGCCGTGG GCCACCAGATCCAGCGCGGCAAACTACCCGGCATGGATGCAGACGATGTCGAGGACGCGGCAGGTATGGTGGTTCTGGCG ATGGGCAAGATGGGCGCGCATGAGCTGAATTATTCGTCAGACATTGACCTGATCTGTCTCTTTGACGAAACCCGTTTCGA CGCAGACGGCTTTCAGCAGGCGCGCGCGGCCTTTTCCCGCGCCACCCGCGCCATGGCCGCCACGCTGAGCGAAATCACTG CGCAGGGCTACGTGTTTCGCACCGACCTGCGGTTGCGCCCCGATCCGTCGGTCACGCCGGTCTGCATCGCCATGGAAGCC GCGGAACAGTATTACGAGAGTCTGGGCCGCACATGGGAGCGTGCGGCCTATATCAAGGCGCGCGTCGCGGCGGGTGATGC GGCGGCCGGGAACAGGTTCCTCAAGACACTCACACCCTTCGTGTGGCGGCGGCATCTGGATTTCGCAGCGATCCAGGATG CGCATGACATGCGGCTGGCCATTCGCGAACACAAGGGGCTTGGCGGGCCGATCACATTGCCCGGGCACAATATGAAACTG GGGCGCGGCGGTATCCGCGAGATCGAGTTTTTCACCCAGACCCGACAATTGATCGCGGGCGGGCGTGATCCGGACCTGCG GTGCCGGGAAACGCGCAAGGGGCTTGCGGTTCTGGCACAGAAGAAATGGGTCGAAACCGATGTTGCCGAAGCGCTGAGCG ATCACTACGTCGCGCATAGGACGGTCGAGCATCGCTTGCAGATGGTGCAGGATGCGCAAACGCATAATCTGCCAAGGTCG GAGGAGAACTTTGCGCGTCTCGCTGCCATGATGGCCACCGATGTGGCGAGTTTGCAAGCAGACCTGAAGCAACGGCTGGA AGCGGTACATGAGTTGACTGAAGGGTTCTTCGCACCGTCAAAGCCACAGCCGCCGGTGCCGCAGGTCGATCTCGATGAAT CCATCCTGAACCGCTGGATCAGCTACCCCGCGCTGCGCAGCACACGCAGCAGGCAGATTTTCGACCGGGTCAAGCCGGAT TTGCTGGCGCGTCTGTCCGGCACGGCGCGCCCGCAGGATGCGTTGATTGCTTTTGACGGGTTTCTGGCTGGCCTGCCTGC GGGGGTGCAGTTGTTTTCCCTGCTGGAGGCCAATCCCCAGCTGACCGATCTGATCATCGACATTACAGGCACATCGCCCG CGCTGGCACAGTATCTGTCGCGCAATGCGGGTGTGTTTGATGCGGTGATCGGTGGCGGCTTCTTTTCCGACTGGCCCCAT CAGGCAGGGCTGGAGCGCGCGCTTGAGGAGGCGTTGGCCCGTGAAACCGACTATGAGCTGCGATTGGATACGACGCGCCG GTGGCACAAGGAATGGAACTTTCGCATCGGCGTACACCTGTTGCGCGGGTTGATCTCGGCGCAGGAGGCCAGCGCGCAAT ATGCCGATCTGGCGCGCACTGTTCTGGCGGTCATCTGGCCGATTGTGATTGACAATTTTGCGCTCAAACACGGGCCAGCG CCCGGGCGGGGGGCGGTGGTTCTGGGGATGGGGTCGCTCGGGGCCGGGACGCTGAATGCGGGGTCTGACCTGGATCTGAT CGTCATCTATGACCCGCTCGATATGGATGCTTCGGATGGAAGAAAACCCCTTGCATCAAGGGTTTATTACGCGCGCTTAA CGCAGGCGTTGATCACGGCGCTGAGCGCCCCCATGGCGCAGGGCAAACTGTTCGAGGTGGATATGCGGCTGCGCCCCTCG GGCAATCAGGGGCCGGTGGCCACCAGTTGGCCCGCGTTTCAGAGCTATCAGCGCGATGAGGCCTGGACATGGGAGCATCT GGCGCTCACGCGTGCGGCTGTCATCGCGGGGCCTGAGGCGCTGGTGCGTGACGTGGCGGTTTTTACGCGCAGCGTTCTGT CCATGCCGCGCAAGACCGAGGACGTGTTGAAAGAGGTCGCAGATATGCGCCACCGCCTGCAGCAGGCCAAATCCCCACCC GGCCTTTTTGAAGCGAAAACCGGGGCCGGGCGCTTGCAGGAGATTGAGCTACTCGCGCAGGCCGGTGCGCTTTTGACCGG CAAGCCAATGGATCAAACAGCCGATGGCATTAGCTATCTGTCCACATTGGGGGTTCTATCTGCCGAACAGGCCGCGGATT TATCGGCAGGAGCGACGCTTTTTGCCAACCTGCACACCGCCGTGCGGCTTTTGTCTGATCAGCCGCTGGACAGCGCATTG CTGGCACCTGCGGCGCAGGGGTTCCTGAGCGATGTGCTTGACTGCGCCTCTTTTGACGTTCTTGAAACAAAACTGACGCA AAGCTACCAGCGCTGCGATCAGATACTGTCGATGGTGCTCGCACCTTACGTAGCACGTGGAGAGAGCCTGTGA
Upstream 100 bases:
>100_bases TCGCCGGTCAGCCCCTTAAAAACCATCGGCGCAGATAAATTTTCGGCAGTTTTATCGCCATTCGATTGACCTTCGCCTCT CCCAAAGCGAAACCTGTAAT
Downstream 100 bases:
>100_bases AGGGCGATGCAAATGACCCGAAGGCGCTGATCTTTGAAGCCTATCAGATCGCGGATATCACCAAGCCGGAATGCCGCACG ATCTTCCTCGACTGGGCTTT
Product: glutamate-ammonia-ligase adenylyltransferase
Products: NA
Alternate protein names: Glutamine-synthetase adenylyltransferase; ATase; [Glutamate--ammonia-ligase] adenylyltransferase [H]
Number of amino acids: Translated: 930; Mature: 930
Protein sequence:
>930_residues MNLSDAIRRVPTLFDAQKGRELAALFSDFSPDVSALIAGAAGCSPYLAGLIEKEQEWLRSAFEDVDKAVADEIASAAFHA PDGLADGLRRAKRRVAVISALADLGGAWPLERVTAALTDLADAACQSALRAAVGHQIQRGKLPGMDADDVEDAAGMVVLA MGKMGAHELNYSSDIDLICLFDETRFDADGFQQARAAFSRATRAMAATLSEITAQGYVFRTDLRLRPDPSVTPVCIAMEA AEQYYESLGRTWERAAYIKARVAAGDAAAGNRFLKTLTPFVWRRHLDFAAIQDAHDMRLAIREHKGLGGPITLPGHNMKL GRGGIREIEFFTQTRQLIAGGRDPDLRCRETRKGLAVLAQKKWVETDVAEALSDHYVAHRTVEHRLQMVQDAQTHNLPRS EENFARLAAMMATDVASLQADLKQRLEAVHELTEGFFAPSKPQPPVPQVDLDESILNRWISYPALRSTRSRQIFDRVKPD LLARLSGTARPQDALIAFDGFLAGLPAGVQLFSLLEANPQLTDLIIDITGTSPALAQYLSRNAGVFDAVIGGGFFSDWPH QAGLERALEEALARETDYELRLDTTRRWHKEWNFRIGVHLLRGLISAQEASAQYADLARTVLAVIWPIVIDNFALKHGPA PGRGAVVLGMGSLGAGTLNAGSDLDLIVIYDPLDMDASDGRKPLASRVYYARLTQALITALSAPMAQGKLFEVDMRLRPS GNQGPVATSWPAFQSYQRDEAWTWEHLALTRAAVIAGPEALVRDVAVFTRSVLSMPRKTEDVLKEVADMRHRLQQAKSPP GLFEAKTGAGRLQEIELLAQAGALLTGKPMDQTADGISYLSTLGVLSAEQAADLSAGATLFANLHTAVRLLSDQPLDSAL LAPAAQGFLSDVLDCASFDVLETKLTQSYQRCDQILSMVLAPYVARGESL
Sequences:
>Translated_930_residues MNLSDAIRRVPTLFDAQKGRELAALFSDFSPDVSALIAGAAGCSPYLAGLIEKEQEWLRSAFEDVDKAVADEIASAAFHA PDGLADGLRRAKRRVAVISALADLGGAWPLERVTAALTDLADAACQSALRAAVGHQIQRGKLPGMDADDVEDAAGMVVLA MGKMGAHELNYSSDIDLICLFDETRFDADGFQQARAAFSRATRAMAATLSEITAQGYVFRTDLRLRPDPSVTPVCIAMEA AEQYYESLGRTWERAAYIKARVAAGDAAAGNRFLKTLTPFVWRRHLDFAAIQDAHDMRLAIREHKGLGGPITLPGHNMKL GRGGIREIEFFTQTRQLIAGGRDPDLRCRETRKGLAVLAQKKWVETDVAEALSDHYVAHRTVEHRLQMVQDAQTHNLPRS EENFARLAAMMATDVASLQADLKQRLEAVHELTEGFFAPSKPQPPVPQVDLDESILNRWISYPALRSTRSRQIFDRVKPD LLARLSGTARPQDALIAFDGFLAGLPAGVQLFSLLEANPQLTDLIIDITGTSPALAQYLSRNAGVFDAVIGGGFFSDWPH QAGLERALEEALARETDYELRLDTTRRWHKEWNFRIGVHLLRGLISAQEASAQYADLARTVLAVIWPIVIDNFALKHGPA PGRGAVVLGMGSLGAGTLNAGSDLDLIVIYDPLDMDASDGRKPLASRVYYARLTQALITALSAPMAQGKLFEVDMRLRPS GNQGPVATSWPAFQSYQRDEAWTWEHLALTRAAVIAGPEALVRDVAVFTRSVLSMPRKTEDVLKEVADMRHRLQQAKSPP GLFEAKTGAGRLQEIELLAQAGALLTGKPMDQTADGISYLSTLGVLSAEQAADLSAGATLFANLHTAVRLLSDQPLDSAL LAPAAQGFLSDVLDCASFDVLETKLTQSYQRCDQILSMVLAPYVARGESL >Mature_930_residues MNLSDAIRRVPTLFDAQKGRELAALFSDFSPDVSALIAGAAGCSPYLAGLIEKEQEWLRSAFEDVDKAVADEIASAAFHA PDGLADGLRRAKRRVAVISALADLGGAWPLERVTAALTDLADAACQSALRAAVGHQIQRGKLPGMDADDVEDAAGMVVLA MGKMGAHELNYSSDIDLICLFDETRFDADGFQQARAAFSRATRAMAATLSEITAQGYVFRTDLRLRPDPSVTPVCIAMEA AEQYYESLGRTWERAAYIKARVAAGDAAAGNRFLKTLTPFVWRRHLDFAAIQDAHDMRLAIREHKGLGGPITLPGHNMKL GRGGIREIEFFTQTRQLIAGGRDPDLRCRETRKGLAVLAQKKWVETDVAEALSDHYVAHRTVEHRLQMVQDAQTHNLPRS EENFARLAAMMATDVASLQADLKQRLEAVHELTEGFFAPSKPQPPVPQVDLDESILNRWISYPALRSTRSRQIFDRVKPD LLARLSGTARPQDALIAFDGFLAGLPAGVQLFSLLEANPQLTDLIIDITGTSPALAQYLSRNAGVFDAVIGGGFFSDWPH QAGLERALEEALARETDYELRLDTTRRWHKEWNFRIGVHLLRGLISAQEASAQYADLARTVLAVIWPIVIDNFALKHGPA PGRGAVVLGMGSLGAGTLNAGSDLDLIVIYDPLDMDASDGRKPLASRVYYARLTQALITALSAPMAQGKLFEVDMRLRPS GNQGPVATSWPAFQSYQRDEAWTWEHLALTRAAVIAGPEALVRDVAVFTRSVLSMPRKTEDVLKEVADMRHRLQQAKSPP GLFEAKTGAGRLQEIELLAQAGALLTGKPMDQTADGISYLSTLGVLSAEQAADLSAGATLFANLHTAVRLLSDQPLDSAL LAPAAQGFLSDVLDCASFDVLETKLTQSYQRCDQILSMVLAPYVARGESL
Specific function: Adenylation and deadenylation of glutamate--ammonia ligase [H]
COG id: COG1391
COG function: function code OT; Glutamine synthetase adenylyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glnE family [H]
Homologues:
Organism=Escherichia coli, GI1789433, Length=846, Percent_Identity=29.6690307328605, Blast_Score=292, Evalue=6e-80,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023057 - InterPro: IPR005190 - InterPro: IPR013546 [H]
Pfam domain/function: PF08335 GlnD_UR_UTase; PF03710 GlnE [H]
EC number: =2.7.7.42 [H]
Molecular weight: Translated: 101184; Mature: 101184
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLSDAIRRVPTLFDAQKGRELAALFSDFSPDVSALIAGAAGCSPYLAGLIEKEQEWLRS CCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHH AFEDVDKAVADEIASAAFHAPDGLADGLRRAKRRVAVISALADLGGAWPLERVTAALTDL HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH ADAACQSALRAAVGHQIQRGKLPGMDADDVEDAAGMVVLAMGKMGAHELNYSSDIDLICL HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCEEEEECCCCCCCCCCCCCCCCEEEE FDETRFDADGFQQARAAFSRATRAMAATLSEITAQGYVFRTDLRLRPDPSVTPVCIAMEA ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCEECCCCCCCHHHHHHHH AEQYYESLGRTWERAAYIKARVAAGDAAAGNRFLKTLTPFVWRRHLDFAAIQDAHDMRLA HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHCHHHHHHH IREHKGLGGPITLPGHNMKLGRGGIREIEFFTQTRQLIAGGRDPDLRCRETRKGLAVLAQ HHHHCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH KKWVETDVAEALSDHYVAHRTVEHRLQMVQDAQTHNLPRSEENFARLAAMMATDVASLQA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH DLKQRLEAVHELTEGFFAPSKPQPPVPQVDLDESILNRWISYPALRSTRSRQIFDRVKPD HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCHH LLARLSGTARPQDALIAFDGFLAGLPAGVQLFSLLEANPQLTDLIIDITGTSPALAQYLS HHHHHCCCCCCCHHEEEHHHHHHCCCHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHH RNAGVFDAVIGGGFFSDWPHQAGLERALEEALARETDYELRLDTTRRWHKEWNFRIGVHL CCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHCCCHHHHHH LRGLISAQEASAQYADLARTVLAVIWPIVIDNFALKHGPAPGRGAVVLGMGSLGAGTLNA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCC GSDLDLIVIYDPLDMDASDGRKPLASRVYYARLTQALITALSAPMAQGKLFEVDMRLRPS CCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHCCCEEEEEEEECCC GNQGPVATSWPAFQSYQRDEAWTWEHLALTRAAVIAGPEALVRDVAVFTRSVLSMPRKTE CCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHH DVLKEVADMRHRLQQAKSPPGLFEAKTGAGRLQEIELLAQAGALLTGKPMDQTADGISYL HHHHHHHHHHHHHHHCCCCCCCEECCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH STLGVLSAEQAADLSAGATLFANLHTAVRLLSDQPLDSALLAPAAQGFLSDVLDCASFDV HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH LETKLTQSYQRCDQILSMVLAPYVARGESL HHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MNLSDAIRRVPTLFDAQKGRELAALFSDFSPDVSALIAGAAGCSPYLAGLIEKEQEWLRS CCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHH AFEDVDKAVADEIASAAFHAPDGLADGLRRAKRRVAVISALADLGGAWPLERVTAALTDL HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH ADAACQSALRAAVGHQIQRGKLPGMDADDVEDAAGMVVLAMGKMGAHELNYSSDIDLICL HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCEEEEECCCCCCCCCCCCCCCCEEEE FDETRFDADGFQQARAAFSRATRAMAATLSEITAQGYVFRTDLRLRPDPSVTPVCIAMEA ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCEECCCCCCCHHHHHHHH AEQYYESLGRTWERAAYIKARVAAGDAAAGNRFLKTLTPFVWRRHLDFAAIQDAHDMRLA HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHCHHHHHHH IREHKGLGGPITLPGHNMKLGRGGIREIEFFTQTRQLIAGGRDPDLRCRETRKGLAVLAQ HHHHCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH KKWVETDVAEALSDHYVAHRTVEHRLQMVQDAQTHNLPRSEENFARLAAMMATDVASLQA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH DLKQRLEAVHELTEGFFAPSKPQPPVPQVDLDESILNRWISYPALRSTRSRQIFDRVKPD HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCHH LLARLSGTARPQDALIAFDGFLAGLPAGVQLFSLLEANPQLTDLIIDITGTSPALAQYLS HHHHHCCCCCCCHHEEEHHHHHHCCCHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHH RNAGVFDAVIGGGFFSDWPHQAGLERALEEALARETDYELRLDTTRRWHKEWNFRIGVHL CCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHCCCHHHHHH LRGLISAQEASAQYADLARTVLAVIWPIVIDNFALKHGPAPGRGAVVLGMGSLGAGTLNA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCC GSDLDLIVIYDPLDMDASDGRKPLASRVYYARLTQALITALSAPMAQGKLFEVDMRLRPS CCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHCCCEEEEEEEECCC GNQGPVATSWPAFQSYQRDEAWTWEHLALTRAAVIAGPEALVRDVAVFTRSVLSMPRKTE CCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHH DVLKEVADMRHRLQQAKSPPGLFEAKTGAGRLQEIELLAQAGALLTGKPMDQTADGISYL HHHHHHHHHHHHHHHCCCCCCCEECCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH STLGVLSAEQAADLSAGATLFANLHTAVRLLSDQPLDSALLAPAAQGFLSDVLDCASFDV HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH LETKLTQSYQRCDQILSMVLAPYVARGESL HHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11756688 [H]