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The map label for this gene is 110679985

Identifier: 110679985

GI number: 110679985

Start: 2645245

End: 2646429

Strand: Reverse

Name: 110679985

Synonym: RD1_2775

Alternate gene names: NA

Gene position: 2646429-2645245 (Counterclockwise)

Preceding gene: 110679987

Following gene: 110679984

Centisome position: 64.03

GC content: 60.51

Gene sequence:

>1185_bases
ATGACTGGTGACTGCCCGATGAAAGATCTTGAGACGCTGAATTATCCCCATCCGATTGATGGCCTGCAGCTCCCCGACTG
GGTGCCATCTGCGGCGCAAATGTATCTTGCGCATACGGAGGCAGGCCTGCCGATCCGTGCTCTGGCACGGGCAGCAGGCT
GCCATGCGTCCACGATACTGCGCCAGATCAGACGAATAGAAACCAAACGTGACGATCCATTGGTAGATGCCGCTTTGCGC
AATCTGGGGAATGTGCATTTCAAACCCTGCCTGACGCCCGTTACACCCGAACAAGAGGACCCCACCGGCATGACCTTCCA
ATCGAAAATCCGCCAATCCGATCAGGCCGCTGACGCCGCCAAAGACGCGACCTTTGAGGCCGAAGCGGTGCGTGTTCTGC
GCCGTTTATGTGAAACGGGGGCTGTTCTGGCAGTGGCGGCTGAAATGGAAAAGGCCGTTATCGTGCGCGACGGTGTTGCC
GGTGCTGCCACGCGAACCGGGGTGGTCAACCGAAGCTTTGCCGAGGCGCTGGCGCTCAAGGACTGGATTTCGCCCCAGCA
GAATGGAAAAATCACGCGCTATACGATCACGCCTGCGGGCCGCTCGGCGCTTGAGGGCATGATGGATCATGTCAGGGCGG
ACGACCCGCCGGGGTTTGCAGAGAGCCAGACAGCTTTTGTCGGATCGACATCCTCGTGGGGTGCATCGCAGGACATTGAA
ACCGAACGCCCGCGCCGGATGCGCTATAACCTTGCGGAAAGCCCGCTGACAGCGCTGGCGCGTCGCAAGGACAAAAACGG
TGAACAGTTCCTGACAGACAATCTGGTGTCTGCCGGCGAGCAACTGCGCGAAGACTTCGAACTGGCTCAGATGGGGCCGC
GCGTGGCGCAAAACTGGGATAGTTTTCTGACCGCCGGAGATCGTGGCAGCTATGTCCCCGACAGCGGTGTAAACGATGGG
CCATCCAATGCCCGCCGGCGTGTGGCGGATGCTCTGGCGGAGCTTGGCCCCGGCCTGTCCGATGTCGTGCTGCGGTGTTG
CTGCTACCTTGAGGGTCTCGAAACCGCGGAAAAGAAACTCGGCTGGTCGGCGCGGTCGGGCAAGATTGTGCTGCGCATTG
CCTTGATTCGCCTCAGACGCCACTACGACGAAACGGTCGGGCCGGGTGGGCCACTGATTGGATGA

Upstream 100 bases:

>100_bases
TGTAAAAGATACAATACTTTGCATATCTAGCCAAATTAACGAACAGGTAACCAAATTCTTCCTTAGGTTGCATTAATGAA
TACCATTGCAACCTTAGAAA

Downstream 100 bases:

>100_bases
TTGCGTTTCTGATATTGCGGGACGGCGCGATTATGCTGGTTTTGGCATCATCGCAAAGCCTGTGCGCTGCGTAATTCACA
ACCTATGCTGGATTAATCAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 394; Mature: 393

Protein sequence:

>394_residues
MTGDCPMKDLETLNYPHPIDGLQLPDWVPSAAQMYLAHTEAGLPIRALARAAGCHASTILRQIRRIETKRDDPLVDAALR
NLGNVHFKPCLTPVTPEQEDPTGMTFQSKIRQSDQAADAAKDATFEAEAVRVLRRLCETGAVLAVAAEMEKAVIVRDGVA
GAATRTGVVNRSFAEALALKDWISPQQNGKITRYTITPAGRSALEGMMDHVRADDPPGFAESQTAFVGSTSSWGASQDIE
TERPRRMRYNLAESPLTALARRKDKNGEQFLTDNLVSAGEQLREDFELAQMGPRVAQNWDSFLTAGDRGSYVPDSGVNDG
PSNARRRVADALAELGPGLSDVVLRCCCYLEGLETAEKKLGWSARSGKIVLRIALIRLRRHYDETVGPGGPLIG

Sequences:

>Translated_394_residues
MTGDCPMKDLETLNYPHPIDGLQLPDWVPSAAQMYLAHTEAGLPIRALARAAGCHASTILRQIRRIETKRDDPLVDAALR
NLGNVHFKPCLTPVTPEQEDPTGMTFQSKIRQSDQAADAAKDATFEAEAVRVLRRLCETGAVLAVAAEMEKAVIVRDGVA
GAATRTGVVNRSFAEALALKDWISPQQNGKITRYTITPAGRSALEGMMDHVRADDPPGFAESQTAFVGSTSSWGASQDIE
TERPRRMRYNLAESPLTALARRKDKNGEQFLTDNLVSAGEQLREDFELAQMGPRVAQNWDSFLTAGDRGSYVPDSGVNDG
PSNARRRVADALAELGPGLSDVVLRCCCYLEGLETAEKKLGWSARSGKIVLRIALIRLRRHYDETVGPGGPLIG
>Mature_393_residues
TGDCPMKDLETLNYPHPIDGLQLPDWVPSAAQMYLAHTEAGLPIRALARAAGCHASTILRQIRRIETKRDDPLVDAALRN
LGNVHFKPCLTPVTPEQEDPTGMTFQSKIRQSDQAADAAKDATFEAEAVRVLRRLCETGAVLAVAAEMEKAVIVRDGVAG
AATRTGVVNRSFAEALALKDWISPQQNGKITRYTITPAGRSALEGMMDHVRADDPPGFAESQTAFVGSTSSWGASQDIET
ERPRRMRYNLAESPLTALARRKDKNGEQFLTDNLVSAGEQLREDFELAQMGPRVAQNWDSFLTAGDRGSYVPDSGVNDGP
SNARRRVADALAELGPGLSDVVLRCCCYLEGLETAEKKLGWSARSGKIVLRIALIRLRRHYDETVGPGGPLIG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42848; Mature: 42717

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGDCPMKDLETLNYPHPIDGLQLPDWVPSAAQMYLAHTEAGLPIRALARAAGCHASTIL
CCCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHH
RQIRRIETKRDDPLVDAALRNLGNVHFKPCLTPVTPEQEDPTGMTFQSKIRQSDQAADAA
HHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
KDATFEAEAVRVLRRLCETGAVLAVAAEMEKAVIVRDGVAGAATRTGVVNRSFAEALALK
HHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHH
DWISPQQNGKITRYTITPAGRSALEGMMDHVRADDPPGFAESQTAFVGSTSSWGASQDIE
HHCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCC
TERPRRMRYNLAESPLTALARRKDKNGEQFLTDNLVSAGEQLREDFELAQMGPRVAQNWD
CCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
SFLTAGDRGSYVPDSGVNDGPSNARRRVADALAELGPGLSDVVLRCCCYLEGLETAEKKL
HHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC
GWSARSGKIVLRIALIRLRRHYDETVGPGGPLIG
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
TGDCPMKDLETLNYPHPIDGLQLPDWVPSAAQMYLAHTEAGLPIRALARAAGCHASTIL
CCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHH
RQIRRIETKRDDPLVDAALRNLGNVHFKPCLTPVTPEQEDPTGMTFQSKIRQSDQAADAA
HHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
KDATFEAEAVRVLRRLCETGAVLAVAAEMEKAVIVRDGVAGAATRTGVVNRSFAEALALK
HHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHH
DWISPQQNGKITRYTITPAGRSALEGMMDHVRADDPPGFAESQTAFVGSTSSWGASQDIE
HHCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCC
TERPRRMRYNLAESPLTALARRKDKNGEQFLTDNLVSAGEQLREDFELAQMGPRVAQNWD
CCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
SFLTAGDRGSYVPDSGVNDGPSNARRRVADALAELGPGLSDVVLRCCCYLEGLETAEKKL
HHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC
GWSARSGKIVLRIALIRLRRHYDETVGPGGPLIG
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA