Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

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The map label for this gene is 110679952

Identifier: 110679952

GI number: 110679952

Start: 2609934

End: 2610074

Strand: Reverse

Name: 110679952

Synonym: RD1_2740

Alternate gene names: NA

Gene position: 2610074-2609934 (Counterclockwise)

Preceding gene: 110679954

Following gene: 110679951

Centisome position: 63.15

GC content: 50.35

Gene sequence:

>141_bases
GTGCAGGCGTTTTTTTTATTTGGGCATATCGCGTCCTTCAAGGCTATGCTGGACAGATGTGGGGCGCGTGAGCCGTTTTC
CGCTTTTGGCATTTTATTTGCACGCGCAGCACGTCATGATGCGTGCAATGCAGCATTATGA

Upstream 100 bases:

>100_bases
TTTAGCTTGGACTGTTGTGGTAGATTGATTATAACCAAGTCACTGCTCGATAGGTTTCTTGCCTGTATGAAACCTGCCTC
AATAACTCAACGCCTGCCTT

Downstream 100 bases:

>100_bases
ACAAGCAAGGACATCGCCATGAGTTTCGAGATTTCTCTTTCCGGTAAAACGGCCATCGTGACAGGGTCAAATTCGGGCAT
CGGGCTGGGTATTGCATGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 46; Mature: 46

Protein sequence:

>46_residues
MQAFFLFGHIASFKAMLDRCGAREPFSAFGILFARAARHDACNAAL

Sequences:

>Translated_46_residues
MQAFFLFGHIASFKAMLDRCGAREPFSAFGILFARAARHDACNAAL
>Mature_46_residues
MQAFFLFGHIASFKAMLDRCGAREPFSAFGILFARAARHDACNAAL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5049; Mature: 5049

Theoretical pI: Translated: 8.83; Mature: 8.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.3 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
8.7 %Cys+Met (Translated Protein)
4.3 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
8.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQAFFLFGHIASFKAMLDRCGAREPFSAFGILFARAARHDACNAAL
CCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MQAFFLFGHIASFKAMLDRCGAREPFSAFGILFARAARHDACNAAL
CCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA