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The map label for this gene is 110679950

Identifier: 110679950

GI number: 110679950

Start: 2608017

End: 2609054

Strand: Reverse

Name: 110679950

Synonym: RD1_2736

Alternate gene names: NA

Gene position: 2609054-2608017 (Counterclockwise)

Preceding gene: 110679951

Following gene: 110679945

Centisome position: 63.13

GC content: 58.48

Gene sequence:

>1038_bases
ATGGCGAAAAAACGGATCAACCTCGCACTTCAGGGCGGAGGCGCGCATGGCGCGTTTACCTGGGGTGTGCTGGACCGGCT
GCTCATGGATGAAGATCTGGAAGTGGCCGCGATTTCCGGCACAAGTGCCGGGGCACTGAACGGTGCGGCCTTCAAGGCGG
GCATGATTGAGGGCGGGCGCGAGGGCGCGCGCGACATGCTGGAGTGGCTGTGGAAAGAAGTTGGCGCGCGGCCCGAGATG
AAAATGTCGGAATGGATGGCGCCGTTTTCCCTGACCTCCGTGTCCTCGGCGCTTGAAAACTCATGGCCTTACCTTGCTGC
GGATGCCTGGTCGCGGGTGGTATCGCCCTATGCCTACGGGCCGTTTTATACCAACCCGCTCAGGCCGATCGTGTCCAAGT
TCAACTATGATGAAGTGTGTGCAGAAAACGGCAAGGGTCCCTGCCTTTTCGTGTGCGCAACGCGGGTGCGCAGCGGCAAG
ATCCGCGTGTTCAAGGACAGCGAAATCAGCACCGATGTGATCCTTGCCTCTGCCTGCCTGCCGACGATGTTTCAGGCCGT
TCCTGTCACGGACCCCGTCACCGGCACAACCGAGGATTACTGGGATGGCGGCTATACCGGCAATCCGGCCCTGTTCCCGC
TTTTCAACCCGTCCCTGCCCGAAGATATCGTGGTGGTGAACATCAACCCGCTGGAACGTGTCGACACTCCGCGCACAGCG
CAGGCGATCCAGAACCGGATCAACGAAATCAGCTTCAATTCATCGCTGCTGCGCGAGATGCGCGCCATCCACTTCGTGCA
ACGGTTGCTTGACAGTGGCAGGTTGGAATCCGATGAAAAACAACGTGTTCTGATGCATATGATTGCCGATGATGCCTTGA
TGAACGAATTGTCCGTGGCAACAAAAGTGATCCCGACCGCTTACACGCTGGCGAAGCTGAAAGAGGCCGGACAGCGGGCC
GCGGATGATTTTCTGAGCGTGCATCGCGATGATCTCAACAAGCGCAGTTCCGTCGATATGGTCGAGATGTTCCAGTAA

Upstream 100 bases:

>100_bases
CGATGGCGGCTGGACGGCGCTGTAACGGCCTGTTGTCTCCTGTTGCTATAGGAACGGGCGCAGGTATCTTTGACAAATCG
ACCAGAAGGGGCGATGGAAA

Downstream 100 bases:

>100_bases
TTACGCCTGCCCGGCAGGCCTTTGCTCATCCTTGCCGTTGGGATAGACCAGACCGGCGGAAATCACCAGTTTGGCGGCTT
CTTCGACCGTCATATCCAAC

Product: patatin family phospholipase

Products: NA

Alternate protein names: Phospholipase Patatin Family; Alpha-Beta Hydrolase Family Esterase; Patatin Family Phospholipase; Patatin-Like Phospholipase; Esterase Of Alpha-Beta Hydrolase Superfamily; Serine Protease; FabD/Lysophospholipase-Like Esterase; FabD/Lysophospholipase-Like Protein; Alpha/Beta Fold Family Hydrolase; FabD/Lysophospholipase; Esterase; Phospholipase

Number of amino acids: Translated: 345; Mature: 344

Protein sequence:

>345_residues
MAKKRINLALQGGGAHGAFTWGVLDRLLMDEDLEVAAISGTSAGALNGAAFKAGMIEGGREGARDMLEWLWKEVGARPEM
KMSEWMAPFSLTSVSSALENSWPYLAADAWSRVVSPYAYGPFYTNPLRPIVSKFNYDEVCAENGKGPCLFVCATRVRSGK
IRVFKDSEISTDVILASACLPTMFQAVPVTDPVTGTTEDYWDGGYTGNPALFPLFNPSLPEDIVVVNINPLERVDTPRTA
QAIQNRINEISFNSSLLREMRAIHFVQRLLDSGRLESDEKQRVLMHMIADDALMNELSVATKVIPTAYTLAKLKEAGQRA
ADDFLSVHRDDLNKRSSVDMVEMFQ

Sequences:

>Translated_345_residues
MAKKRINLALQGGGAHGAFTWGVLDRLLMDEDLEVAAISGTSAGALNGAAFKAGMIEGGREGARDMLEWLWKEVGARPEM
KMSEWMAPFSLTSVSSALENSWPYLAADAWSRVVSPYAYGPFYTNPLRPIVSKFNYDEVCAENGKGPCLFVCATRVRSGK
IRVFKDSEISTDVILASACLPTMFQAVPVTDPVTGTTEDYWDGGYTGNPALFPLFNPSLPEDIVVVNINPLERVDTPRTA
QAIQNRINEISFNSSLLREMRAIHFVQRLLDSGRLESDEKQRVLMHMIADDALMNELSVATKVIPTAYTLAKLKEAGQRA
ADDFLSVHRDDLNKRSSVDMVEMFQ
>Mature_344_residues
AKKRINLALQGGGAHGAFTWGVLDRLLMDEDLEVAAISGTSAGALNGAAFKAGMIEGGREGARDMLEWLWKEVGARPEMK
MSEWMAPFSLTSVSSALENSWPYLAADAWSRVVSPYAYGPFYTNPLRPIVSKFNYDEVCAENGKGPCLFVCATRVRSGKI
RVFKDSEISTDVILASACLPTMFQAVPVTDPVTGTTEDYWDGGYTGNPALFPLFNPSLPEDIVVVNINPLERVDTPRTAQ
AIQNRINEISFNSSLLREMRAIHFVQRLLDSGRLESDEKQRVLMHMIADDALMNELSVATKVIPTAYTLAKLKEAGQRAA
DDFLSVHRDDLNKRSSVDMVEMFQ

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38080; Mature: 37949

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKKRINLALQGGGAHGAFTWGVLDRLLMDEDLEVAAISGTSAGALNGAAFKAGMIEGGR
CCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHCCCCCH
EGARDMLEWLWKEVGARPEMKMSEWMAPFSLTSVSSALENSWPYLAADAWSRVVSPYAYG
HHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHCCCCEEEHHHHHHHHCCCCCC
PFYTNPLRPIVSKFNYDEVCAENGKGPCLFVCATRVRSGKIRVFKDSEISTDVILASACL
CCCCCCHHHHHHHCCHHHHHHCCCCCCEEEEEECCCCCCCEEEEECCCCCHHHHHHHHHH
PTMFQAVPVTDPVTGTTEDYWDGGYTGNPALFPLFNPSLPEDIVVVNINPLERVDTPRTA
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEECCHHHHCCCCHHH
QAIQNRINEISFNSSLLREMRAIHFVQRLLDSGRLESDEKQRVLMHMIADDALMNELSVA
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
TKVIPTAYTLAKLKEAGQRAADDFLSVHRDDLNKRSSVDMVEMFQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCC
>Mature Secondary Structure 
AKKRINLALQGGGAHGAFTWGVLDRLLMDEDLEVAAISGTSAGALNGAAFKAGMIEGGR
CCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHCCCCCH
EGARDMLEWLWKEVGARPEMKMSEWMAPFSLTSVSSALENSWPYLAADAWSRVVSPYAYG
HHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHCCCCEEEHHHHHHHHCCCCCC
PFYTNPLRPIVSKFNYDEVCAENGKGPCLFVCATRVRSGKIRVFKDSEISTDVILASACL
CCCCCCHHHHHHHCCHHHHHHCCCCCCEEEEEECCCCCCCEEEEECCCCCHHHHHHHHHH
PTMFQAVPVTDPVTGTTEDYWDGGYTGNPALFPLFNPSLPEDIVVVNINPLERVDTPRTA
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEECCHHHHCCCCHHH
QAIQNRINEISFNSSLLREMRAIHFVQRLLDSGRLESDEKQRVLMHMIADDALMNELSVA
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
TKVIPTAYTLAKLKEAGQRAADDFLSVHRDDLNKRSSVDMVEMFQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA