Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

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The map label for this gene is 110679905

Identifier: 110679905

GI number: 110679905

Start: 2557063

End: 2557671

Strand: Direct

Name: 110679905

Synonym: RD1_2683

Alternate gene names: NA

Gene position: 2557063-2557671 (Clockwise)

Preceding gene: 110679901

Following gene: 110679906

Centisome position: 61.87

GC content: 62.56

Gene sequence:

>609_bases
ATGCCAGCATCGTCCAAAATACCGATCATTCTTCTGGCGGCGGGCGCGTCGCGCCGGATGCGGGGGGGTGATAAGTTGCT
GGAGGAGGTGGACGGTCTCCCCCTGTTGCGCCGACAAACCATGCGGGCCATCAACGCGACAAAGGGCCCTGTGATCGTAA
CACTGCCCCCGGAGGGACACGCCCGCAAGGAGGCTTTGACGGGGCTGAAGGTGACAACGGTACCAGTGCCCGACGCAGCG
CATGGAATGAGCGTGAGCCTGCGGCGCGGCCTTGCGCAGGTGCCAGTGGATGCCGGTGCGGTGATGGTGCTGCTACCGGA
TTTACCGGATCTGACAACTAAAGACCTGGTGGCTGTGTTGGACGCTGCGGACAGAACCAAAGACGCGCTCATCTGGCGGG
GAACCACGTCGGATGGCGCTGCTGGCCACCCGATTGTCTTTGCCAGAGCCTTGTTTGCCGAACTGGCGTCGATCAGCGGT
GATACGGGCGGCGCATCGGTCGTGGCGCGTCATTCGGACAAGACGTCGTTCATCCGCCTGCCGGGCAATCGCGCACGGTT
AGATTTGGACACGCCCGAAGACTGGGCAAAATGGCGCGCATCACAATGA

Upstream 100 bases:

>100_bases
TAAATCAACAGGGCGTTGCCACGCATAGCACTTGGTAAATCGAGGTTTACGCTGCAACCTGTAACAGTTTGGTTAATTGG
CCTATAGGGAATGGATGAAC

Downstream 100 bases:

>100_bases
CGGTGCGGAGCGATGTGGCATTTTTTGCATCTACCGAAAGACGGCGCTTGATCTTGCCACTGGATAAACCTGCGCACCGC
AGGAAGTCTCGAGCAAAATT

Product: hypothetical protein

Products: NA

Alternate protein names: Purine Catabolism Protein PucB; Protein Family UPF; Molybdenum Cofactor Cytidylyltransferase; Molybdopterin Biosynthesis; 4-Diphosphocytidyl-2c-Methyl-D-Erythritol Synthase; 4-Diphosphocytidyl-2C-Methyl-D-Erythritolsynthas E; MobA-Like Protein; Molybdenum Cofactor Biosynthesis Protein; L-Seryl-TRNA(Ser) Selenium Transferase Protein; MobA-Like Protein-Like Protein; MobA-Like Protein-Like; Molybdopterin Molybdochelatase

Number of amino acids: Translated: 202; Mature: 201

Protein sequence:

>202_residues
MPASSKIPIILLAAGASRRMRGGDKLLEEVDGLPLLRRQTMRAINATKGPVIVTLPPEGHARKEALTGLKVTTVPVPDAA
HGMSVSLRRGLAQVPVDAGAVMVLLPDLPDLTTKDLVAVLDAADRTKDALIWRGTTSDGAAGHPIVFARALFAELASISG
DTGGASVVARHSDKTSFIRLPGNRARLDLDTPEDWAKWRASQ

Sequences:

>Translated_202_residues
MPASSKIPIILLAAGASRRMRGGDKLLEEVDGLPLLRRQTMRAINATKGPVIVTLPPEGHARKEALTGLKVTTVPVPDAA
HGMSVSLRRGLAQVPVDAGAVMVLLPDLPDLTTKDLVAVLDAADRTKDALIWRGTTSDGAAGHPIVFARALFAELASISG
DTGGASVVARHSDKTSFIRLPGNRARLDLDTPEDWAKWRASQ
>Mature_201_residues
PASSKIPIILLAAGASRRMRGGDKLLEEVDGLPLLRRQTMRAINATKGPVIVTLPPEGHARKEALTGLKVTTVPVPDAAH
GMSVSLRRGLAQVPVDAGAVMVLLPDLPDLTTKDLVAVLDAADRTKDALIWRGTTSDGAAGHPIVFARALFAELASISGD
TGGASVVARHSDKTSFIRLPGNRARLDLDTPEDWAKWRASQ

Specific function: Unknown

COG id: COG2068

COG function: function code R; Uncharacterized MobA-related protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21361; Mature: 21230

Theoretical pI: Translated: 10.47; Mature: 10.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPASSKIPIILLAAGASRRMRGGDKLLEEVDGLPLLRRQTMRAINATKGPVIVTLPPEGH
CCCCCCCCEEEEECCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEECCCCC
ARKEALTGLKVTTVPVPDAAHGMSVSLRRGLAQVPVDAGAVMVLLPDLPDLTTKDLVAVL
HHHHHHCCCEEEEECCCCCCCCCCHHHHCCHHHCCCCCCEEEEEECCCCCCCHHHHHHHH
DAADRTKDALIWRGTTSDGAAGHPIVFARALFAELASISGDTGGASVVARHSDKTSFIRL
HHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEE
PGNRARLDLDTPEDWAKWRASQ
CCCCEEEECCCCHHHHHHCCCC
>Mature Secondary Structure 
PASSKIPIILLAAGASRRMRGGDKLLEEVDGLPLLRRQTMRAINATKGPVIVTLPPEGH
CCCCCCCEEEEECCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEECCCCC
ARKEALTGLKVTTVPVPDAAHGMSVSLRRGLAQVPVDAGAVMVLLPDLPDLTTKDLVAVL
HHHHHHCCCEEEEECCCCCCCCCCHHHHCCHHHCCCCCCEEEEEECCCCCCCHHHHHHHH
DAADRTKDALIWRGTTSDGAAGHPIVFARALFAELASISGDTGGASVVARHSDKTSFIRL
HHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEE
PGNRARLDLDTPEDWAKWRASQ
CCCCEEEECCCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA