Click here to switch to the map view.

The map label for this gene is 110679892

Identifier: 110679892

GI number: 110679892

Start: 2543634

End: 2544473

Strand: Reverse

Name: 110679892

Synonym: RD1_2668

Alternate gene names: NA

Gene position: 2544473-2543634 (Counterclockwise)

Preceding gene: 110679893

Following gene: 110679891

Centisome position: 61.56

GC content: 56.19

Gene sequence:

>840_bases
ATGACATCGATGATCCGGGCGGGGGTGCTGGTTTTGACGCTCTGCGCAGCCGCAATCACCATCGCAAAACCTTCTCAGGC
TCAGAATACCGACCGTCTCGAAGCCTTTTTGAGCGCTACCGGGTTTGATGTTGCGCTCGAAAGCATGAAGCTGACAGCGA
GCAGTGCGCCCGCGATGATCGGCCTTGAGGCGGAGGATTTCGGCCAGCAGTGGACAAGGTTGGTAGACGAAATATTCGAC
GCGCAAACGATGCACGATATGGCGATCGACATATTGTCACAGACGCTCGAAGAGGACCTGATGATCCATGCCGTTGACTT
TTACACCTCGGATCTGGGCACGCGTCTTCTGGTTGTTGAAAACGCGTCGCATATGAAAGAAGACGATGAATTGAAATCGG
AAAGCGGGCAGGCGATTATTGCGGGGCTTGTGCAAATCGGCTCGCCGCGCTTGCAGGAGCTGAAGCGCCTGAATGAAGCG
GTCGGCTCTGAGGATGCCTCTGTCCACGCCATACAGGAGGTGCAGGTACGCTTCTTGATGGCGGCGGCCGCTGCCGGCGT
GATCGAACTGCGCATGGATGAAGCGGATCTGCGCGAGAACCTCAGGCGGCAGGAAGGCGAGATGCGGCGCAACATGAAGG
TGAACAGCCTGGCCGCGTCGGCCTATACCTATCAAGCCTTTTCCGATGACGAAATCAGCGCCTACGCGGATGCTTTGGAA
CATCCGAAAATGCAGAAGGTCTACGCCCTTATGAATGCCGTCCAGTTTGAGATCATGGCCGATCGTTACGAACAGATGGC
CCTCGCGATGAGTGAATTGCGCCCGACTCAGGAGTTGTAA

Upstream 100 bases:

>100_bases
TCACGCCTGTTGGTGTGCCCTCGGGAAATTTCATTGCTCCTTTGCACAATTGCCCTAAGCTCCCATATGTTACCTAGGCG
TTGCGACACAGGAGGCATAG

Downstream 100 bases:

>100_bases
GCCATGCGTGCTGTGCTGCTTGCTGTCGGTCTGAGTATCTGCGCGTCTCCGCTTTGGGCGAATGCGCGCATGACCGTTTT
GATGGATGTGCTGCGCATCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 279; Mature: 278

Protein sequence:

>279_residues
MTSMIRAGVLVLTLCAAAITIAKPSQAQNTDRLEAFLSATGFDVALESMKLTASSAPAMIGLEAEDFGQQWTRLVDEIFD
AQTMHDMAIDILSQTLEEDLMIHAVDFYTSDLGTRLLVVENASHMKEDDELKSESGQAIIAGLVQIGSPRLQELKRLNEA
VGSEDASVHAIQEVQVRFLMAAAAAGVIELRMDEADLRENLRRQEGEMRRNMKVNSLAASAYTYQAFSDDEISAYADALE
HPKMQKVYALMNAVQFEIMADRYEQMALAMSELRPTQEL

Sequences:

>Translated_279_residues
MTSMIRAGVLVLTLCAAAITIAKPSQAQNTDRLEAFLSATGFDVALESMKLTASSAPAMIGLEAEDFGQQWTRLVDEIFD
AQTMHDMAIDILSQTLEEDLMIHAVDFYTSDLGTRLLVVENASHMKEDDELKSESGQAIIAGLVQIGSPRLQELKRLNEA
VGSEDASVHAIQEVQVRFLMAAAAAGVIELRMDEADLRENLRRQEGEMRRNMKVNSLAASAYTYQAFSDDEISAYADALE
HPKMQKVYALMNAVQFEIMADRYEQMALAMSELRPTQEL
>Mature_278_residues
TSMIRAGVLVLTLCAAAITIAKPSQAQNTDRLEAFLSATGFDVALESMKLTASSAPAMIGLEAEDFGQQWTRLVDEIFDA
QTMHDMAIDILSQTLEEDLMIHAVDFYTSDLGTRLLVVENASHMKEDDELKSESGQAIIAGLVQIGSPRLQELKRLNEAV
GSEDASVHAIQEVQVRFLMAAAAAGVIELRMDEADLRENLRRQEGEMRRNMKVNSLAASAYTYQAFSDDEISAYADALEH
PKMQKVYALMNAVQFEIMADRYEQMALAMSELRPTQEL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30873; Mature: 30741

Theoretical pI: Translated: 4.24; Mature: 4.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSMIRAGVLVLTLCAAAITIAKPSQAQNTDRLEAFLSATGFDVALESMKLTASSAPAMI
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEE
GLEAEDFGQQWTRLVDEIFDAQTMHDMAIDILSQTLEEDLMIHAVDFYTSDLGTRLLVVE
ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE
NASHMKEDDELKSESGQAIIAGLVQIGSPRLQELKRLNEAVGSEDASVHAIQEVQVRFLM
CHHHCCCHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
AAAAAGVIELRMDEADLRENLRRQEGEMRRNMKVNSLAASAYTYQAFSDDEISAYADALE
HHHHHHHHEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEEECCCCCHHHHHHHHHH
HPKMQKVYALMNAVQFEIMADRYEQMALAMSELRPTQEL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TSMIRAGVLVLTLCAAAITIAKPSQAQNTDRLEAFLSATGFDVALESMKLTASSAPAMI
CHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEE
GLEAEDFGQQWTRLVDEIFDAQTMHDMAIDILSQTLEEDLMIHAVDFYTSDLGTRLLVVE
ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE
NASHMKEDDELKSESGQAIIAGLVQIGSPRLQELKRLNEAVGSEDASVHAIQEVQVRFLM
CHHHCCCHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
AAAAAGVIELRMDEADLRENLRRQEGEMRRNMKVNSLAASAYTYQAFSDDEISAYADALE
HHHHHHHHEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEEECCCCCHHHHHHHHHH
HPKMQKVYALMNAVQFEIMADRYEQMALAMSELRPTQEL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA