| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is 110679887
Identifier: 110679887
GI number: 110679887
Start: 2539941
End: 2540477
Strand: Reverse
Name: 110679887
Synonym: RD1_2661
Alternate gene names: NA
Gene position: 2540477-2539941 (Counterclockwise)
Preceding gene: 110679888
Following gene: 110679886
Centisome position: 61.47
GC content: 57.54
Gene sequence:
>537_bases ATGGAAATGGAAAAGATCGCAATACGGGCCCTTGTGGAAACGGAGCGTTTTGACCTGCGCCCCTTGCGCCGCTCTGACAT GGGGCTGATCGAGCTCTACGGTGGGGATGAACGGGTCGCGCGAATGACGACATCGATCCCGCATCCGGTACCACCCGGCA TGGTCGATGCCTATGTGACCCGCGCCATGGCGGATAAGCGCGACCAGGACATCTGGGCCATGGACGGCTCAAAGGCGGAT GCGTCTGAACTGATGGGGGTGATTTCGCTCGAACGCATTGAGCGGGAGCAATCCGAGATAGAATATTGGGTCGCGCCGCC CTATTGGAACACAGGTCTTGCCTCCGAAGCGGTGCAGGCCCTGATCGATGCAAACCCGCATGGGGATAAAACATTCTTTG CCAGCGTGTTTCAGGACAATCCGGCCTCGGCGCGGGTTCTGACGCATTGTGGTTTCGAATACCTCGGCGATGCAGAAAGT TTCAGTGTCGCGCGCGGGACAACAGTGCCAACCTGGACGTATCTGAAAAAACTGTAA
Upstream 100 bases:
>100_bases CCGTCGCGGGGACTGCGGGTGAACCTTATTTGATGTGGAGTCTGGCGGCTTTGACCGTCGCTTCGGTACTTTTCGTGTTG TTCGGAGGAGGAGCATAACG
Downstream 100 bases:
>100_bases TTGAGGGGCGCCGCCCTTCAGGCTAGGAAGCTTGCATGAAATTTCTTGATCTATGCAAAGTCTACATTCGATCCGGCGCG GGCGGGGGCGGTTGTGTCAG
Product: acetyltransferase, putative
Products: NA
Alternate protein names: Acetyltransferase; Acetyltransferase Gnat Family; Acetyltransferase GNAT Family; GCN5-Like N-Acetyltransferase; GNAT Family Acetyltransferase; Acetyltransferase Protein; Gcn5-Related N-Acetyltransferase; N-Acetyltransferase
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues MEMEKIAIRALVETERFDLRPLRRSDMGLIELYGGDERVARMTTSIPHPVPPGMVDAYVTRAMADKRDQDIWAMDGSKAD ASELMGVISLERIEREQSEIEYWVAPPYWNTGLASEAVQALIDANPHGDKTFFASVFQDNPASARVLTHCGFEYLGDAES FSVARGTTVPTWTYLKKL
Sequences:
>Translated_178_residues MEMEKIAIRALVETERFDLRPLRRSDMGLIELYGGDERVARMTTSIPHPVPPGMVDAYVTRAMADKRDQDIWAMDGSKAD ASELMGVISLERIEREQSEIEYWVAPPYWNTGLASEAVQALIDANPHGDKTFFASVFQDNPASARVLTHCGFEYLGDAES FSVARGTTVPTWTYLKKL >Mature_178_residues MEMEKIAIRALVETERFDLRPLRRSDMGLIELYGGDERVARMTTSIPHPVPPGMVDAYVTRAMADKRDQDIWAMDGSKAD ASELMGVISLERIEREQSEIEYWVAPPYWNTGLASEAVQALIDANPHGDKTFFASVFQDNPASARVLTHCGFEYLGDAES FSVARGTTVPTWTYLKKL
Specific function: Unknown
COG id: COG1670
COG function: function code J; Acetyltransferases, including N-acetylases of ribosomal proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19975; Mature: 19975
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEMEKIAIRALVETERFDLRPLRRSDMGLIELYGGDERVARMTTSIPHPVPPGMVDAYVT CCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCHHHHHHHHCCCCCCCCCHHHHHHH RAMADKRDQDIWAMDGSKADASELMGVISLERIEREQSEIEYWVAPPYWNTGLASEAVQA HHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCHHHHHHHH LIDANPHGDKTFFASVFQDNPASARVLTHCGFEYLGDAESFSVARGTTVPTWTYLKKL HHCCCCCCCHHHHHHHHCCCCCHHHHHHHCCHHHHCCCCCCEEECCCCCCHHHHHHCC >Mature Secondary Structure MEMEKIAIRALVETERFDLRPLRRSDMGLIELYGGDERVARMTTSIPHPVPPGMVDAYVT CCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCHHHHHHHHCCCCCCCCCHHHHHHH RAMADKRDQDIWAMDGSKADASELMGVISLERIEREQSEIEYWVAPPYWNTGLASEAVQA HHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCHHHHHHHH LIDANPHGDKTFFASVFQDNPASARVLTHCGFEYLGDAESFSVARGTTVPTWTYLKKL HHCCCCCCCHHHHHHHHCCCCCHHHHHHHCCHHHHCCCCCCEEECCCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA