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The map label for this gene is mcp2 [H]

Identifier: 110679834

GI number: 110679834

Start: 2489200

End: 2490597

Strand: Reverse

Name: mcp2 [H]

Synonym: RD1_2605

Alternate gene names: 110679834

Gene position: 2490597-2489200 (Counterclockwise)

Preceding gene: 110679835

Following gene: 110679829

Centisome position: 60.26

GC content: 57.15

Gene sequence:

>1398_bases
ATGCAAGTCCCCCAACATTTGTCTGCACAAACTGATGTTAATCGCCTTTCATCCGCCGCCGCCGCTCTCGGATATGAGAT
CGTAGACATCGCCGGTTTTCTTGATCTGGTTGAGGCCCACGCCCATGCCCAGACCAGCGGGCTGAAGATCGTCACCGCAC
GGGCGCGGGACATGTCGGCGGCCAACGCAGATGTGCGCGAAGCCGTGCAAGCGATGGCCGAACAGACTGAAACGACCGTT
ACTGATGTGGTCGCTTCTGCCGAGATGGTACGCCAGACCGGTGAAAAATCACGTGCGGTCGCAGGGTGGGTTCAGCAGGT
ATCAAGCCGAACACAAGATGTGGCCGATACCCTGGATGCGGTGAAGCGGAACAACCAGCAAATCGCCAGTATCGCAACGC
AGGTAAATACGCTTGCCATCAATGCCAAGATCGAAGCGGCGCGTGCCGGCGAATCCGGGCGCGGTTTCGCGGTCGTGGCA
GAGGCAATCAACGAGTTGTCACGCCAGACGCGCGGTGCCGCCGTGCAAATCACGGAGAATGTCGAAACGCTCACTGACTG
GATTTTCACATTGGGTCAGGAGGCAAACGGCATCGCCGAACAGGCGTCCGATGTTCTGGAAGCCACCGGGGACACTGACG
CCGCTCTGGGGCGCGTCGAAGCCTCGGTTTCGGCGGCCGATACGCAGGCAAAGCGCATTTCCGAACAGGCACACCGAGTG
GACAGGGCGATTTCGGAGTTTACACCAGCTCTGGCCGAGATCGAAAGCGCTGTGAAGGATACGACCTCCGGCGTTGAAGA
GACCCATGTCCGTATCCTCAACTTGATTGACACATCGGAAACAATTGTACAGTCGACCGCCTTGCTGGGAAATGAAACTG
CGGATGCCCGTTTCATCCATGAGGTCACCAGACTGGCCGGCGAAGTGGCTTCGCAAATGGAAACCGCGCTGAGCCGGGGT
GAGATCTCCATGTCCCGCCTGTTCGACCGAAGTTACCGCCCCATACCGGACACGAATCCCGAGCAGTTCATGACCGAATC
GACGCGGCTTATGGATCAGATCATGCCGGCCATTCAGGAACCGGCATTGGGCTTTGACCCGAAAATCGTATTCTGCGCCG
CGGTCGACGTGAACGGGTATCTGCCCTCACATAACAAGAAATTCTCCCAGCCACAGACGAATGATCCGGTTTGGAACACG
GCCAATTGCCGCAACCGTCGCATTTTTGATGACCGGGTAGGTCTGAAGGCGGGCCGCAATACTGAACCCTTCCTTTTGCA
GGTTTATCGCCGCGACATGGGTGGTGGCGCATTCAAAATGATGAAAGACCTTTCTGCTCCGATTTTTGTACAGGGTCGTC
ATTGGGGCGGGCTCAGGCTTGCCTATAGTTTCGAATAA

Upstream 100 bases:

>100_bases
GCAAATTGCGCAATCAGATTGTGCGTGAACCTCGGTTATGGTTAGCACTTTTTAAGGAAAATCCTGCCAAAACCTCACCA
CAGCCCTATTGTGAGGTCCT

Downstream 100 bases:

>100_bases
AAAAATGCCGCGCACCCTGCGGGCGGCGGCATAGTTAAGCATTCTCATGTGGGGATCGGGCCAGCTGCCAAAACGAACCT
AGTGAGATGTGAAACAGGCA

Product: methyl-accepting chemotaxis protein, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 465; Mature: 465

Protein sequence:

>465_residues
MQVPQHLSAQTDVNRLSSAAAALGYEIVDIAGFLDLVEAHAHAQTSGLKIVTARARDMSAANADVREAVQAMAEQTETTV
TDVVASAEMVRQTGEKSRAVAGWVQQVSSRTQDVADTLDAVKRNNQQIASIATQVNTLAINAKIEAARAGESGRGFAVVA
EAINELSRQTRGAAVQITENVETLTDWIFTLGQEANGIAEQASDVLEATGDTDAALGRVEASVSAADTQAKRISEQAHRV
DRAISEFTPALAEIESAVKDTTSGVEETHVRILNLIDTSETIVQSTALLGNETADARFIHEVTRLAGEVASQMETALSRG
EISMSRLFDRSYRPIPDTNPEQFMTESTRLMDQIMPAIQEPALGFDPKIVFCAAVDVNGYLPSHNKKFSQPQTNDPVWNT
ANCRNRRIFDDRVGLKAGRNTEPFLLQVYRRDMGGGAFKMMKDLSAPIFVQGRHWGGLRLAYSFE

Sequences:

>Translated_465_residues
MQVPQHLSAQTDVNRLSSAAAALGYEIVDIAGFLDLVEAHAHAQTSGLKIVTARARDMSAANADVREAVQAMAEQTETTV
TDVVASAEMVRQTGEKSRAVAGWVQQVSSRTQDVADTLDAVKRNNQQIASIATQVNTLAINAKIEAARAGESGRGFAVVA
EAINELSRQTRGAAVQITENVETLTDWIFTLGQEANGIAEQASDVLEATGDTDAALGRVEASVSAADTQAKRISEQAHRV
DRAISEFTPALAEIESAVKDTTSGVEETHVRILNLIDTSETIVQSTALLGNETADARFIHEVTRLAGEVASQMETALSRG
EISMSRLFDRSYRPIPDTNPEQFMTESTRLMDQIMPAIQEPALGFDPKIVFCAAVDVNGYLPSHNKKFSQPQTNDPVWNT
ANCRNRRIFDDRVGLKAGRNTEPFLLQVYRRDMGGGAFKMMKDLSAPIFVQGRHWGGLRLAYSFE
>Mature_465_residues
MQVPQHLSAQTDVNRLSSAAAALGYEIVDIAGFLDLVEAHAHAQTSGLKIVTARARDMSAANADVREAVQAMAEQTETTV
TDVVASAEMVRQTGEKSRAVAGWVQQVSSRTQDVADTLDAVKRNNQQIASIATQVNTLAINAKIEAARAGESGRGFAVVA
EAINELSRQTRGAAVQITENVETLTDWIFTLGQEANGIAEQASDVLEATGDTDAALGRVEASVSAADTQAKRISEQAHRV
DRAISEFTPALAEIESAVKDTTSGVEETHVRILNLIDTSETIVQSTALLGNETADARFIHEVTRLAGEVASQMETALSRG
EISMSRLFDRSYRPIPDTNPEQFMTESTRLMDQIMPAIQEPALGFDPKIVFCAAVDVNGYLPSHNKKFSQPQTNDPVWNT
ANCRNRRIFDDRVGLKAGRNTEPFLLQVYRRDMGGGAFKMMKDLSAPIFVQGRHWGGLRLAYSFE

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=245, Percent_Identity=27.7551020408163, Blast_Score=67, Evalue=4e-12,
Organism=Escherichia coli, GI1788195, Length=237, Percent_Identity=27.4261603375527, Blast_Score=65, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR000727 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 50478; Mature: 50478

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVPQHLSAQTDVNRLSSAAAALGYEIVDIAGFLDLVEAHAHAQTSGLKIVTARARDMSA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHCCC
ANADVREAVQAMAEQTETTVTDVVASAEMVRQTGEKSRAVAGWVQQVSSRTQDVADTLDA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VKRNNQQIASIATQVNTLAINAKIEAARAGESGRGFAVVAEAINELSRQTRGAAVQITEN
HHCCCHHHHHHHHHHHHEEEEEEEEHHHCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECH
VETLTDWIFTLGQEANGIAEQASDVLEATGDTDAALGRVEASVSAADTQAKRISEQAHRV
HHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DRAISEFTPALAEIESAVKDTTSGVEETHVRILNLIDTSETIVQSTALLGNETADARFIH
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHH
EVTRLAGEVASQMETALSRGEISMSRLFDRSYRPIPDTNPEQFMTESTRLMDQIMPAIQE
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC
PALGFDPKIVFCAAVDVNGYLPSHNKKFSQPQTNDPVWNTANCRNRRIFDDRVGLKAGRN
CCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCC
TEPFLLQVYRRDMGGGAFKMMKDLSAPIFVQGRHWGGLRLAYSFE
CCHHHHHHHHHHCCCHHHHHHHHCCCCEEEECCCCCCEEEEEECC
>Mature Secondary Structure
MQVPQHLSAQTDVNRLSSAAAALGYEIVDIAGFLDLVEAHAHAQTSGLKIVTARARDMSA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHCCC
ANADVREAVQAMAEQTETTVTDVVASAEMVRQTGEKSRAVAGWVQQVSSRTQDVADTLDA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VKRNNQQIASIATQVNTLAINAKIEAARAGESGRGFAVVAEAINELSRQTRGAAVQITEN
HHCCCHHHHHHHHHHHHEEEEEEEEHHHCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECH
VETLTDWIFTLGQEANGIAEQASDVLEATGDTDAALGRVEASVSAADTQAKRISEQAHRV
HHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DRAISEFTPALAEIESAVKDTTSGVEETHVRILNLIDTSETIVQSTALLGNETADARFIH
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHH
EVTRLAGEVASQMETALSRGEISMSRLFDRSYRPIPDTNPEQFMTESTRLMDQIMPAIQE
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC
PALGFDPKIVFCAAVDVNGYLPSHNKKFSQPQTNDPVWNTANCRNRRIFDDRVGLKAGRN
CCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCC
TEPFLLQVYRRDMGGGAFKMMKDLSAPIFVQGRHWGGLRLAYSFE
CCHHHHHHHHHHCCCHHHHHHHHCCCCEEEECCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]