Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

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The map label for this gene is 110679830

Identifier: 110679830

GI number: 110679830

Start: 2483356

End: 2483664

Strand: Direct

Name: 110679830

Synonym: RD1_2600

Alternate gene names: NA

Gene position: 2483356-2483664 (Clockwise)

Preceding gene: 110679828

Following gene: 110679831

Centisome position: 60.08

GC content: 51.13

Gene sequence:

>309_bases
GTGGCAAACGAGTTGAATATAGGTAAGTGTATGTATCTCAAGAAAGTCGATGGTCCGCGCTCCGTCACCCTTGCGGATGG
AACAGTCATGACTCAAGCGGATCTGCCACCAGTGACCACAAGGCGGTGGGTGGCCTCACGTAAAGCGGCTGTTGTGCGCG
GGGTGGCCTATGGGCTGATTCCCCAGAAAGAGGCACTGTCGCGCTACCGGATCAGTGAAGATGAATTCCATGAGTGGGTG
AAAGCGGTCTCTGAACATGGTGAAGATGCTCTGAAAGCAACAACTTTACAAAAATATAGACAACCTTAA

Upstream 100 bases:

>100_bases
GGGGCATATGTCGTCTCCGGGATATACGAGGGAATATAGGAAAATCCTAATTACTCTCAAGAGCGCGCTTCATCGGTCTT
TAAGGTGAATTCGTCAAGCT

Downstream 100 bases:

>100_bases
GTTGATAAGCTAGTTTTTGGTATCACGGTAACGTGCAGTTAACCTTTTAAGTTCACGGTTAACGCGAAGATAAAATGATA
GGCCTTTGCGGAGATTAATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 102; Mature: 101

Protein sequence:

>102_residues
MANELNIGKCMYLKKVDGPRSVTLADGTVMTQADLPPVTTRRWVASRKAAVVRGVAYGLIPQKEALSRYRISEDEFHEWV
KAVSEHGEDALKATTLQKYRQP

Sequences:

>Translated_102_residues
MANELNIGKCMYLKKVDGPRSVTLADGTVMTQADLPPVTTRRWVASRKAAVVRGVAYGLIPQKEALSRYRISEDEFHEWV
KAVSEHGEDALKATTLQKYRQP
>Mature_101_residues
ANELNIGKCMYLKKVDGPRSVTLADGTVMTQADLPPVTTRRWVASRKAAVVRGVAYGLIPQKEALSRYRISEDEFHEWVK
AVSEHGEDALKATTLQKYRQP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11445; Mature: 11314

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANELNIGKCMYLKKVDGPRSVTLADGTVMTQADLPPVTTRRWVASRKAAVVRGVAYGLI
CCCCCCCCEEEEEEECCCCCEEEEECCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCC
PQKEALSRYRISEDEFHEWVKAVSEHGEDALKATTLQKYRQP
CCHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ANELNIGKCMYLKKVDGPRSVTLADGTVMTQADLPPVTTRRWVASRKAAVVRGVAYGLI
CCCCCCCEEEEEEECCCCCEEEEECCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCC
PQKEALSRYRISEDEFHEWVKAVSEHGEDALKATTLQKYRQP
CCHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA