Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

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The map label for this gene is 110679804

Identifier: 110679804

GI number: 110679804

Start: 2456907

End: 2457128

Strand: Direct

Name: 110679804

Synonym: RD1_2568

Alternate gene names: NA

Gene position: 2456907-2457128 (Clockwise)

Preceding gene: 110679803

Following gene: 110679809

Centisome position: 59.44

GC content: 59.01

Gene sequence:

>222_bases
ATGTTCAATGCGGTGCGCGCCGAACAACCGCTGTGGCGCAACAATATGTTGGGCTATGCGGACCCGGACCTGTTTCAGCC
GCGCCGTGAAGATGATCCCGACCGGCAGGCAGGCAAGGCCGAAACATCCCCCTACATGCGCGCCGAAAGGCAGTGCATCC
TGCGCCTGCCCAAGACCAGCGCTTTGGTGTTTACGATTCACAGCTATGTAGTGAAGTCCTGA

Upstream 100 bases:

>100_bases
AGCCAGTTGGACGCTGGCCGAAAAAGCAGGGCGGCCCCTGTCAGACATCCACGCACCGGTAAAGGATTACACGGCGGACA
TCGCGAAAAGAGTTCAACGC

Downstream 100 bases:

>100_bases
AGTATCAGGGTGTTACGACTCCTTTCTAATGTGATATTGGCGTCGGCATCTCCTGAGAGTTCAGCGCAACGCAATCTCAA
GGGATGGCCAGGGATGCAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 73; Mature: 73

Protein sequence:

>73_residues
MFNAVRAEQPLWRNNMLGYADPDLFQPRREDDPDRQAGKAETSPYMRAERQCILRLPKTSALVFTIHSYVVKS

Sequences:

>Translated_73_residues
MFNAVRAEQPLWRNNMLGYADPDLFQPRREDDPDRQAGKAETSPYMRAERQCILRLPKTSALVFTIHSYVVKS
>Mature_73_residues
MFNAVRAEQPLWRNNMLGYADPDLFQPRREDDPDRQAGKAETSPYMRAERQCILRLPKTSALVFTIHSYVVKS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8498; Mature: 8498

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNAVRAEQPLWRNNMLGYADPDLFQPRREDDPDRQAGKAETSPYMRAERQCILRLPKTS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCC
ALVFTIHSYVVKS
CHHHHHHHHHHCC
>Mature Secondary Structure
MFNAVRAEQPLWRNNMLGYADPDLFQPRREDDPDRQAGKAETSPYMRAERQCILRLPKTS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCC
ALVFTIHSYVVKS
CHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA