Click here to switch to the map view.

The map label for this gene is 110679790

Identifier: 110679790

GI number: 110679790

Start: 2440696

End: 2441319

Strand: Reverse

Name: 110679790

Synonym: RD1_2554

Alternate gene names: NA

Gene position: 2441319-2440696 (Counterclockwise)

Preceding gene: 110679791

Following gene: 110679789

Centisome position: 59.07

GC content: 57.05

Gene sequence:

>624_bases
ATGACCCAGGCTGCGACAGTAGATTTCAACAACTTTGCCGAAGGCGCGGTTCTTGGGGACAATACCGATCTCGGTGGCGG
CGTTTTTGCTGACATCACGGCCTTCAAGGGTATAGACAAGGCGGTTGTCTTCAACACGCTTGGCGCTGTGAACACCACGA
AGGACAAGGACCTGTTGTCGCCCTTCACAAACGCCGAAGACGCGACAGATAAACGCGGGTTTGGGAACGCGCTGATCGTT
CAGGAAAACGACGGCGCGCCGGATGACAATGGAAGCGGCGGAACGATCGTGTTCAGTTTCCTGACCGATGTCATCCTCGA
CGAGCTGTTCCTTCTGGACTCCGAGATTGGGACAACAGCAAGCCTGTTCTCCGGCTCCACTCTGGTCAAGGCATTTTCGC
TGACAGCCGACAATGAGTCGGACACGGGCAACAACCCCGCGAACAACGAGTTTACTGTGCTCGACTTTGGTGGTGCGACC
GGCGACAAGCTGGAAGTGGTCTTCACAAGGTCCGGTGCGGTTGGCGAGATTGAGGTTTCCGCGGTGCCGGTTCCTGCAGG
TCTGCCTTTGCTGCTCGGCGGCATTGGTGCCTTTGCATGGATCAAGCGACGCAAGAAGGCCTGA

Upstream 100 bases:

>100_bases
CTCGGCTACACGGTACGGACGCTTCTACATTTAAAAGGGATATGGAATGAGTGTGCTAAAAAGTATCGCAGTTGCTGCGG
TTATGACGGGGGCAGCAGGG

Downstream 100 bases:

>100_bases
GCTGCGCTTGAAACCTGAAGGAAACGCCCCGGCCCGGGGCGTTTCGCTTTATCAACTACGTGGCCCGTCGACGCCACGAT
AGTGTCAACGGCTTACAGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 206

Protein sequence:

>207_residues
MTQAATVDFNNFAEGAVLGDNTDLGGGVFADITAFKGIDKAVVFNTLGAVNTTKDKDLLSPFTNAEDATDKRGFGNALIV
QENDGAPDDNGSGGTIVFSFLTDVILDELFLLDSEIGTTASLFSGSTLVKAFSLTADNESDTGNNPANNEFTVLDFGGAT
GDKLEVVFTRSGAVGEIEVSAVPVPAGLPLLLGGIGAFAWIKRRKKA

Sequences:

>Translated_207_residues
MTQAATVDFNNFAEGAVLGDNTDLGGGVFADITAFKGIDKAVVFNTLGAVNTTKDKDLLSPFTNAEDATDKRGFGNALIV
QENDGAPDDNGSGGTIVFSFLTDVILDELFLLDSEIGTTASLFSGSTLVKAFSLTADNESDTGNNPANNEFTVLDFGGAT
GDKLEVVFTRSGAVGEIEVSAVPVPAGLPLLLGGIGAFAWIKRRKKA
>Mature_206_residues
TQAATVDFNNFAEGAVLGDNTDLGGGVFADITAFKGIDKAVVFNTLGAVNTTKDKDLLSPFTNAEDATDKRGFGNALIVQ
ENDGAPDDNGSGGTIVFSFLTDVILDELFLLDSEIGTTASLFSGSTLVKAFSLTADNESDTGNNPANNEFTVLDFGGATG
DKLEVVFTRSGAVGEIEVSAVPVPAGLPLLLGGIGAFAWIKRRKKA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21418; Mature: 21287

Theoretical pI: Translated: 3.96; Mature: 3.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQAATVDFNNFAEGAVLGDNTDLGGGVFADITAFKGIDKAVVFNTLGAVNTTKDKDLLS
CCCEEEECCCCCCCCEEECCCCCCCCCCEEHHHHHCCCCHHHHHHHCCCCCCCCCHHHHC
PFTNAEDATDKRGFGNALIVQENDGAPDDNGSGGTIVFSFLTDVILDELFLLDSEIGTTA
CCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCH
SLFSGSTLVKAFSLTADNESDTGNNPANNEFTVLDFGGATGDKLEVVFTRSGAVGEIEVS
HHHCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEEECCCCCCEEEEE
AVPVPAGLPLLLGGIGAFAWIKRRKKA
EECCCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TQAATVDFNNFAEGAVLGDNTDLGGGVFADITAFKGIDKAVVFNTLGAVNTTKDKDLLS
CCEEEECCCCCCCCEEECCCCCCCCCCEEHHHHHCCCCHHHHHHHCCCCCCCCCHHHHC
PFTNAEDATDKRGFGNALIVQENDGAPDDNGSGGTIVFSFLTDVILDELFLLDSEIGTTA
CCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCH
SLFSGSTLVKAFSLTADNESDTGNNPANNEFTVLDFGGATGDKLEVVFTRSGAVGEIEVS
HHHCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEEECCCCCCEEEEE
AVPVPAGLPLLLGGIGAFAWIKRRKKA
EECCCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA