Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

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The map label for this gene is 110679786

Identifier: 110679786

GI number: 110679786

Start: 2438368

End: 2438526

Strand: Direct

Name: 110679786

Synonym: RD1_2550

Alternate gene names: NA

Gene position: 2438368-2438526 (Clockwise)

Preceding gene: 110679785

Following gene: 110679787

Centisome position: 59.0

GC content: 49.06

Gene sequence:

>159_bases
ATGATGCCCGATCTTGGAAAGTACAGCGAGGCGGTTTTGTCCTCCTATGCGGCAACGCTATTGTTATTGGCCTTGTTGGT
TTTCATCACGTTACATAAAGGGCGCAAAGCGCGCCGTGCCCTTGATGAAATCGAACGCAAAAGAGACAGAGATGCCTAA

Upstream 100 bases:

>100_bases
CGGGGTTTGTGCTGCTGTTTCTGGCGCTGGTGCTCTACCGCACGGGTACGGAAATCAGGCTGCGCCGCGCCAAGGCCCTG
TTGGCACGGGAGGCCCGCTC

Downstream 100 bases:

>100_bases
GATATCGCCGCTGATGATTGCACCGCCGCTGATCTTTGCGGGCTTTATCGCATTGGCTGGCGTTGGCATGTTTCGCAACG
ACCCGAACGAGCTGCGATCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 52; Mature: 52

Protein sequence:

>52_residues
MMPDLGKYSEAVLSSYAATLLLLALLVFITLHKGRKARRALDEIERKRDRDA

Sequences:

>Translated_52_residues
MMPDLGKYSEAVLSSYAATLLLLALLVFITLHKGRKARRALDEIERKRDRDA
>Mature_52_residues
MMPDLGKYSEAVLSSYAATLLLLALLVFITLHKGRKARRALDEIERKRDRDA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5917; Mature: 5917

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMPDLGKYSEAVLSSYAATLLLLALLVFITLHKGRKARRALDEIERKRDRDA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MMPDLGKYSEAVLSSYAATLLLLALLVFITLHKGRKARRALDEIERKRDRDA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA