| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is 110679786
Identifier: 110679786
GI number: 110679786
Start: 2438368
End: 2438526
Strand: Direct
Name: 110679786
Synonym: RD1_2550
Alternate gene names: NA
Gene position: 2438368-2438526 (Clockwise)
Preceding gene: 110679785
Following gene: 110679787
Centisome position: 59.0
GC content: 49.06
Gene sequence:
>159_bases ATGATGCCCGATCTTGGAAAGTACAGCGAGGCGGTTTTGTCCTCCTATGCGGCAACGCTATTGTTATTGGCCTTGTTGGT TTTCATCACGTTACATAAAGGGCGCAAAGCGCGCCGTGCCCTTGATGAAATCGAACGCAAAAGAGACAGAGATGCCTAA
Upstream 100 bases:
>100_bases CGGGGTTTGTGCTGCTGTTTCTGGCGCTGGTGCTCTACCGCACGGGTACGGAAATCAGGCTGCGCCGCGCCAAGGCCCTG TTGGCACGGGAGGCCCGCTC
Downstream 100 bases:
>100_bases GATATCGCCGCTGATGATTGCACCGCCGCTGATCTTTGCGGGCTTTATCGCATTGGCTGGCGTTGGCATGTTTCGCAACG ACCCGAACGAGCTGCGATCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 52; Mature: 52
Protein sequence:
>52_residues MMPDLGKYSEAVLSSYAATLLLLALLVFITLHKGRKARRALDEIERKRDRDA
Sequences:
>Translated_52_residues MMPDLGKYSEAVLSSYAATLLLLALLVFITLHKGRKARRALDEIERKRDRDA >Mature_52_residues MMPDLGKYSEAVLSSYAATLLLLALLVFITLHKGRKARRALDEIERKRDRDA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5917; Mature: 5917
Theoretical pI: Translated: 10.23; Mature: 10.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMPDLGKYSEAVLSSYAATLLLLALLVFITLHKGRKARRALDEIERKRDRDA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MMPDLGKYSEAVLSSYAATLLLLALLVFITLHKGRKARRALDEIERKRDRDA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA